RNA–Protein interactions for RNA: ENST00000431239.5

CHD1L-204, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 2,907 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-204ENST00000431239 BMP2KQ9NSY1 1161 aaPredicted RBP20.47■□□□□ 0.87
CHD1L-204ENST00000431239 EEF2P13639 858 aaKnown RBP20.47■□□□□ 0.87
CHD1L-204ENST00000431239 POLR2FP61218 127 aaKnown RBP20.47■□□□□ 0.87
CHD1L-204ENST00000431239 PDXDC1Q6P996 788 aa20.47■□□□□ 0.87
CHD1L-204ENST00000431239 TRIM34Q9BYJ4 488 aa20.47■□□□□ 0.87
CHD1L-204ENST00000431239 ZNF219Q9P2Y4 722 aaPredicted RBP20.47■□□□□ 0.87
CHD1L-204ENST00000431239 JRKLQ9Y4A0 524 aa20.47■□□□□ 0.87
CHD1L-204ENST00000431239 IKQ13123 557 aaPredicted RBP20.47■□□□□ 0.87
CHD1L-204ENST00000431239 CREG2Q8IUH2 290 aa20.47■□□□□ 0.87
CHD1L-204ENST00000431239 EXOC4Q96A65 974 aa20.47■□□□□ 0.87
CHD1L-204ENST00000431239 ANO3Q9BYT9 981 aa20.47■□□□□ 0.87
CHD1L-204ENST00000431239 SLC7A5Q01650 507 aa20.46■□□□□ 0.87
CHD1L-204ENST00000431239 CDC37Q16543 378 aaPredicted RBP20.46■□□□□ 0.87
CHD1L-204ENST00000431239 ZCWPW2Q504Y3 356 aa20.46■□□□□ 0.87
CHD1L-204ENST00000431239 TAF3Q5VWG9 929 aa20.46■□□□□ 0.87
CHD1L-204ENST00000431239 LRRC27Q9C0I9 530 aa20.46■□□□□ 0.87
CHD1L-204ENST00000431239 AFF2P51816 1311 aa20.46■□□□□ 0.87
CHD1L-204ENST00000431239 MED24O75448 989 aa20.46■□□□□ 0.87
CHD1L-204ENST00000431239 GDF11O95390 407 aa20.46■□□□□ 0.87
CHD1L-204ENST00000431239 PSMD2Q13200 908 aa20.46■□□□□ 0.87
CHD1L-204ENST00000431239 PRR16Q569H4 304 aa20.46■□□□□ 0.87
CHD1L-204ENST00000431239 MTMR8Q96EF0 704 aa20.46■□□□□ 0.87
CHD1L-204ENST00000431239 PLEKHA4Q9H4M7 779 aa20.46■□□□□ 0.87
CHD1L-204ENST00000431239 DDTLA6NHG4 134 aaPredicted RBP20.45■□□□□ 0.86
CHD1L-204ENST00000431239 TUBBP07437 444 aa20.45■□□□□ 0.86
CHD1L-204ENST00000431239 CAPN2P17655 700 aa20.45■□□□□ 0.86
CHD1L-204ENST00000431239 ZSCAN26Q16670 478 aa20.45■□□□□ 0.86
CHD1L-204ENST00000431239 ARFGEF1Q9Y6D6 1849 aa20.45■□□□□ 0.86
CHD1L-204ENST00000431239 CRKP46108 304 aa20.45■□□□□ 0.86
CHD1L-204ENST00000431239 ALS2CR12Q96Q35 445 aa20.45■□□□□ 0.86
CHD1L-204ENST00000431239 OSBPL9Q96SU4 736 aa20.45■□□□□ 0.86
CHD1L-204ENST00000431239 P2RX7Q99572 595 aaKnown RBP20.45■□□□□ 0.86
CHD1L-204ENST00000431239 ATF5Q9Y2D1 282 aaPredicted RBP20.45■□□□□ 0.86
CHD1L-204ENST00000431239 A0A0U1RQG5 324 aaPredicted RBP20.44■□□□□ 0.86
CHD1L-204ENST00000431239 RAPGEF1Q13905 1077 aa20.44■□□□□ 0.86
CHD1L-204ENST00000431239 SEPT2Q15019 361 aa20.44■□□□□ 0.86
CHD1L-204ENST00000431239 FAM83BQ5T0W9 1011 aa20.44■□□□□ 0.86
CHD1L-204ENST00000431239 HGSNATQ68CP4 663 aa20.44■□□□□ 0.86
CHD1L-204ENST00000431239 SLFN13Q68D06 897 aa20.44■□□□□ 0.86
CHD1L-204ENST00000431239 CCDC65Q8IXS2 484 aa20.44■□□□□ 0.86
CHD1L-204ENST00000431239 SCFD1Q8WVM8 642 aa20.44■□□□□ 0.86
CHD1L-204ENST00000431239 LRRC1Q9BTT6 524 aa20.44■□□□□ 0.86
CHD1L-204ENST00000431239 NT5C3AQ9H0P0 336 aa20.44■□□□□ 0.86
CHD1L-204ENST00000431239 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.44■□□□□ 0.86
CHD1L-204ENST00000431239 TLR2O60603 784 aa20.44■□□□□ 0.86
CHD1L-204ENST00000431239 NOL4O94818 638 aa20.44■□□□□ 0.86
CHD1L-204ENST00000431239 GCFC2P16383 781 aaKnown RBP20.44■□□□□ 0.86
CHD1L-204ENST00000431239 CASP5P51878 434 aa20.44■□□□□ 0.86
CHD1L-204ENST00000431239 PSMC6P62333 389 aa20.44■□□□□ 0.86
CHD1L-204ENST00000431239 PABPC4Q13310 644 aaKnown RBP eCLIP20.44■□□□□ 0.867e-9■■■□□ 15.7
CHD1L-204ENST00000431239 MAP9Q49MG5 647 aa20.44■□□□□ 0.86
CHD1L-204ENST00000431239 CCDC181Q5TID7 509 aa20.44■□□□□ 0.86
CHD1L-204ENST00000431239 RPGRIP1Q96KN7 1286 aa20.44■□□□□ 0.86
CHD1L-204ENST00000431239 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.44■□□□□ 0.86
CHD1L-204ENST00000431239 FAM204AQ9H8W3 233 aa20.44■□□□□ 0.86
CHD1L-204ENST00000431239 HPCAL4Q9UM19 191 aa20.44■□□□□ 0.86
CHD1L-204ENST00000431239 KDM3AQ9Y4C1 1321 aa20.44■□□□□ 0.86
CHD1L-204ENST00000431239 RNF40O75150 1001 aa20.43■□□□□ 0.86
CHD1L-204ENST00000431239 CYP11B2P19099 503 aa20.43■□□□□ 0.86
CHD1L-204ENST00000431239 EPS15P42566 896 aa20.43■□□□□ 0.86
CHD1L-204ENST00000431239 IQCDQ96DY2 449 aa20.43■□□□□ 0.86
CHD1L-204ENST00000431239 SELENOOQ9BVL4 669 aa20.43■□□□□ 0.86
CHD1L-204ENST00000431239 DMGDHQ9UI17 866 aaKnown RBP20.43■□□□□ 0.86
CHD1L-204ENST00000431239 LTBP1Q14766 1721 aa20.43■□□□□ 0.86
CHD1L-204ENST00000431239 CYP4A11Q02928 519 aa20.43■□□□□ 0.86
CHD1L-204ENST00000431239 CERKLQ49MI3 558 aaPredicted RBP20.43■□□□□ 0.86
CHD1L-204ENST00000431239 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.43■□□□□ 0.86
CHD1L-204ENST00000431239 PROM2Q8N271 834 aa20.43■□□□□ 0.86
CHD1L-204ENST00000431239 FAM71BQ8TC56 605 aa20.43■□□□□ 0.86
CHD1L-204ENST00000431239 MS4A14Q96JA4 679 aa20.43■□□□□ 0.86
CHD1L-204ENST00000431239 ACBD3Q9H3P7 528 aa20.43■□□□□ 0.86
CHD1L-204ENST00000431239 ABCB11O95342 1321 aa20.43■□□□□ 0.86
CHD1L-204ENST00000431239 SFMBT2Q5VUG0 894 aa20.43■□□□□ 0.86
CHD1L-204ENST00000431239 FAM133AQ8N9E0 248 aa20.43■□□□□ 0.86
CHD1L-204ENST00000431239 EMILIN3Q9NT22 766 aa20.43■□□□□ 0.86
CHD1L-204ENST00000431239 SLC30A10Q6XR72 485 aa20.42■□□□□ 0.86
CHD1L-204ENST00000431239 SPATA4Q8NEY3 305 aa20.42■□□□□ 0.86
CHD1L-204ENST00000431239 BCAS3Q9H6U6 928 aa20.42■□□□□ 0.86
CHD1L-204ENST00000431239 SUGT1Q9Y2Z0 365 aa20.42■□□□□ 0.86
CHD1L-204ENST00000431239 PCDHA2Q9Y5H9 948 aa20.42■□□□□ 0.86
CHD1L-204ENST00000431239 TARSL2A2RTX5 802 aaKnown RBP20.42■□□□□ 0.86
CHD1L-204ENST00000431239 HOXA13P31271 388 aaPredicted RBP20.42■□□□□ 0.86
CHD1L-204ENST00000431239 ADAM9Q13443 819 aa20.42■□□□□ 0.86
CHD1L-204ENST00000431239 SLC9C1Q4G0N8 1177 aa20.42■□□□□ 0.86
CHD1L-204ENST00000431239 ARSHQ5FYA8 562 aa20.42■□□□□ 0.86
CHD1L-204ENST00000431239 IQCEQ6IPM2 695 aa20.42■□□□□ 0.86
CHD1L-204ENST00000431239 KLRG2A4D1S0 409 aaPredicted RBP20.41■□□□□ 0.86
CHD1L-204ENST00000431239 MEIS2O14770 477 aa20.41■□□□□ 0.86
CHD1L-204ENST00000431239 LCA5LO95447 670 aa20.41■□□□□ 0.86
CHD1L-204ENST00000431239 SYF2O95926 243 aaKnown RBP20.41■□□□□ 0.86
CHD1L-204ENST00000431239 ACTN1P12814 892 aa20.41■□□□□ 0.86
CHD1L-204ENST00000431239 MCM3P25205 808 aa20.41■□□□□ 0.86
CHD1L-204ENST00000431239 ARHGAP4P98171 946 aa20.41■□□□□ 0.86
CHD1L-204ENST00000431239 ASTE1Q2TB18 679 aaPredicted RBP20.41■□□□□ 0.86
CHD1L-204ENST00000431239 DNAAF5Q86Y56 855 aa20.41■□□□□ 0.86
CHD1L-204ENST00000431239 TBC1D5Q92609 795 aa20.41■□□□□ 0.86
CHD1L-204ENST00000431239 ZNF622Q969S3 477 aaKnown RBP eCLIP20.41■□□□□ 0.866e-8■□□□□ 11.2
CHD1L-204ENST00000431239 KCNMB3Q9NPA1 279 aa20.41■□□□□ 0.86
CHD1L-204ENST00000431239 CEP72Q9P209 647 aa20.41■□□□□ 0.86
CHD1L-204ENST00000431239 PACSIN2Q9UNF0 486 aaPredicted RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms