RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 ITGB5P18084 799 aa18.58■□□□□ 0.56
USHBP1-203ENST00000431146 PBX1P40424 430 aa18.58■□□□□ 0.56
USHBP1-203ENST00000431146 RPS6P62753 249 aaKnown RBP18.58■□□□□ 0.56
USHBP1-203ENST00000431146 EHHADHQ08426 723 aa18.58■□□□□ 0.56
USHBP1-203ENST00000431146 CTTNQ14247 550 aaKnown RBP18.58■□□□□ 0.56
USHBP1-203ENST00000431146 ARSHQ5FYA8 562 aa18.58■□□□□ 0.56
USHBP1-203ENST00000431146 MCF2L2Q86YR7 1114 aa18.58■□□□□ 0.56
USHBP1-203ENST00000431146 TEX2Q8IWB9 1127 aa18.58■□□□□ 0.56
USHBP1-203ENST00000431146 TC2NQ8N9U0 490 aa18.58■□□□□ 0.56
USHBP1-203ENST00000431146 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.58■□□□□ 0.56
USHBP1-203ENST00000431146 SYTL5Q8TDW5 730 aaPredicted RBP18.58■□□□□ 0.56
USHBP1-203ENST00000431146 SLC5A5Q92911 643 aa18.58■□□□□ 0.56
USHBP1-203ENST00000431146 ZNF577Q9BSK1 485 aa18.58■□□□□ 0.56
USHBP1-203ENST00000431146 LRRC10BA6NIK2 292 aa18.57■□□□□ 0.56
USHBP1-203ENST00000431146 GAS7O60861 476 aa18.57■□□□□ 0.56
USHBP1-203ENST00000431146 SPAG1Q07617 926 aa18.57■□□□□ 0.56
USHBP1-203ENST00000431146 NSMFQ6X4W1 530 aa18.57■□□□□ 0.56
USHBP1-203ENST00000431146 CNKSR2Q8WXI2 1034 aa18.57■□□□□ 0.56
USHBP1-203ENST00000431146 TAAR1Q96RJ0 339 aa18.57■□□□□ 0.56
USHBP1-203ENST00000431146 WDR11Q9BZH6 1224 aa18.57■□□□□ 0.56
USHBP1-203ENST00000431146 ZHX3Q9H4I2 956 aa18.57■□□□□ 0.56
USHBP1-203ENST00000431146 THAP9Q9H5L6 903 aa18.57■□□□□ 0.56
USHBP1-203ENST00000431146 POLD4Q9HCU8 107 aa18.57■□□□□ 0.56
USHBP1-203ENST00000431146 BMP2KQ9NSY1 1161 aaPredicted RBP18.57■□□□□ 0.56
USHBP1-203ENST00000431146 DNM3Q9UQ16 869 aa18.57■□□□□ 0.56
USHBP1-203ENST00000431146 BICDL2A1A5D9 508 aa18.56■□□□□ 0.56
USHBP1-203ENST00000431146 DDX39AO00148 427 aaKnown RBP18.56■□□□□ 0.56
USHBP1-203ENST00000431146 PES1O00541 588 aaKnown RBP18.56■□□□□ 0.56
USHBP1-203ENST00000431146 NKRFO15226 690 aaKnown RBP eCLIP18.56■□□□□ 0.56
USHBP1-203ENST00000431146 KRT18P05783 430 aaKnown RBP18.56■□□□□ 0.56
USHBP1-203ENST00000431146 EIF2AK2P19525 551 aaKnown RBP18.56■□□□□ 0.56
USHBP1-203ENST00000431146 VGLL4Q14135 290 aa18.56■□□□□ 0.56
USHBP1-203ENST00000431146 ANKRD20A12PQ8NF67 263 aa18.56■□□□□ 0.56
USHBP1-203ENST00000431146 DCPSQ96C86 337 aaKnown RBP18.56■□□□□ 0.56
USHBP1-203ENST00000431146 MXRA8Q9BRK3 442 aa18.56■□□□□ 0.56
USHBP1-203ENST00000431146 RPTORQ8N122 1335 aa18.56■□□□□ 0.56
USHBP1-203ENST00000431146 ZBTB39O15060 712 aa18.56■□□□□ 0.56
USHBP1-203ENST00000431146 RBL2Q08999 1139 aa18.56■□□□□ 0.56
USHBP1-203ENST00000431146 E4F1Q66K89 784 aaPredicted RBP18.56■□□□□ 0.56
USHBP1-203ENST00000431146 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.56■□□□□ 0.56
USHBP1-203ENST00000431146 TPH2Q8IWU9 490 aa18.56■□□□□ 0.56
USHBP1-203ENST00000431146 PIGOQ8TEQ8 1089 aa18.56■□□□□ 0.56
USHBP1-203ENST00000431146 DYDC2Q96IM9 177 aa18.56■□□□□ 0.56
USHBP1-203ENST00000431146 TMX1Q9H3N1 280 aa18.56■□□□□ 0.56
USHBP1-203ENST00000431146 UNC45AQ9H3U1 944 aa18.56■□□□□ 0.56
USHBP1-203ENST00000431146 AFG3L2Q9Y4W6 797 aa18.56■□□□□ 0.56
USHBP1-203ENST00000431146 IPO5O00410 1097 aaKnown RBP18.55■□□□□ 0.56
USHBP1-203ENST00000431146 COBLL1Q53SF7 1204 aa18.55■□□□□ 0.56
USHBP1-203ENST00000431146 FAM26FQ5R3K3 315 aa18.55■□□□□ 0.56
USHBP1-203ENST00000431146 CENPPQ6IPU0 288 aa18.55■□□□□ 0.56
USHBP1-203ENST00000431146 TMEM139Q8IV31 216 aa18.55■□□□□ 0.56
USHBP1-203ENST00000431146 SULF1Q8IWU6 871 aa18.55■□□□□ 0.56
USHBP1-203ENST00000431146 BHMT2Q9H2M3 363 aa18.55■□□□□ 0.56
USHBP1-203ENST00000431146 WDR90Q96KV7 1748 aa18.55■□□□□ 0.56
USHBP1-203ENST00000431146 PITPNM2Q9BZ72 1349 aa18.55■□□□□ 0.56
USHBP1-203ENST00000431146 C19orf81C9J6K1 198 aa18.55■□□□□ 0.56
USHBP1-203ENST00000431146 SLC26A4O43511 780 aa18.55■□□□□ 0.56
USHBP1-203ENST00000431146 MRPS9P82933 396 aaKnown RBP18.55■□□□□ 0.56
USHBP1-203ENST00000431146 SETQ01105 290 aaPredicted RBP18.55■□□□□ 0.56
USHBP1-203ENST00000431146 UBXN1Q04323 297 aa18.55■□□□□ 0.56
USHBP1-203ENST00000431146 PPP2R5CQ13362 524 aa18.55■□□□□ 0.56
USHBP1-203ENST00000431146 HERC4Q5GLZ8 1057 aaPredicted RBP18.55■□□□□ 0.56
USHBP1-203ENST00000431146 NOL9Q5SY16 702 aaKnown RBP18.55■□□□□ 0.56
USHBP1-203ENST00000431146 SNRNP48Q6IEG0 339 aaKnown RBP18.55■□□□□ 0.56
USHBP1-203ENST00000431146 CCAR2Q8N163 923 aaKnown RBP18.55■□□□□ 0.56
USHBP1-203ENST00000431146 GUF1Q8N442 669 aaKnown RBP18.55■□□□□ 0.56
USHBP1-203ENST00000431146 C12orf42Q96LP6 360 aa18.55■□□□□ 0.56
USHBP1-203ENST00000431146 POLR3CQ9BUI4 534 aaPredicted RBP18.55■□□□□ 0.56
USHBP1-203ENST00000431146 KCNH7Q9NS40 1196 aa18.55■□□□□ 0.56
USHBP1-203ENST00000431146 RNF146Q9NTX7 359 aa18.55■□□□□ 0.56
USHBP1-203ENST00000431146 TMOD4Q9NZQ9 345 aa18.55■□□□□ 0.56
USHBP1-203ENST00000431146 MAGEC2Q9UBF1 373 aaPredicted RBP18.55■□□□□ 0.56
USHBP1-203ENST00000431146 SNCAIPQ9Y6H5 919 aa18.55■□□□□ 0.56
USHBP1-203ENST00000431146 OTOFQ9HC10 1997 aa18.55■□□□□ 0.56
USHBP1-203ENST00000431146 NRDCO43847 1150 aa18.54■□□□□ 0.56
USHBP1-203ENST00000431146 SLITRK3O94933 977 aa18.54■□□□□ 0.56
USHBP1-203ENST00000431146 EEF1GP26641 437 aaKnown RBP18.54■□□□□ 0.56
USHBP1-203ENST00000431146 DSG3P32926 999 aa18.54■□□□□ 0.56
USHBP1-203ENST00000431146 PPP1R2P41236 205 aa18.54■□□□□ 0.56
USHBP1-203ENST00000431146 PSMD2Q13200 908 aa18.54■□□□□ 0.56
USHBP1-203ENST00000431146 RNF207Q6ZRF8 634 aa18.54■□□□□ 0.56
USHBP1-203ENST00000431146 CCDC65Q8IXS2 484 aa18.54■□□□□ 0.56
USHBP1-203ENST00000431146 SYT2Q8N9I0 419 aaPredicted RBP18.54■□□□□ 0.56
USHBP1-203ENST00000431146 REPS2Q8NFH8 660 aa18.54■□□□□ 0.56
USHBP1-203ENST00000431146 CNOT6LQ96LI5 555 aaKnown RBP18.54■□□□□ 0.56
USHBP1-203ENST00000431146 HSD17B14Q9BPX1 270 aa18.54■□□□□ 0.56
USHBP1-203ENST00000431146 GTPBP4Q9BZE4 634 aaKnown RBP18.54■□□□□ 0.56
USHBP1-203ENST00000431146 BCAS3Q9H6U6 928 aa18.54■□□□□ 0.56
USHBP1-203ENST00000431146 MYCLP12524 364 aaPredicted RBP18.53■□□□□ 0.56
USHBP1-203ENST00000431146 ERCC3P19447 782 aa18.53■□□□□ 0.56
USHBP1-203ENST00000431146 CASP14P31944 242 aa18.53■□□□□ 0.56
USHBP1-203ENST00000431146 COG2Q14746 738 aa18.53■□□□□ 0.56
USHBP1-203ENST00000431146 TMEM132BQ14DG7 1078 aa18.53■□□□□ 0.56
USHBP1-203ENST00000431146 PPFIBP1Q86W92 1011 aa18.53■□□□□ 0.56
USHBP1-203ENST00000431146 REEP2Q9BRK0 252 aa18.53■□□□□ 0.56
USHBP1-203ENST00000431146 RUSC1Q9BVN2 902 aa18.53■□□□□ 0.56
USHBP1-203ENST00000431146 WRAP73Q9P2S5 460 aaPredicted RBP18.53■□□□□ 0.56
USHBP1-203ENST00000431146 RABGAP1Q9Y3P9 1069 aa18.53■□□□□ 0.56
USHBP1-203ENST00000431146 AKR1B15C9JRZ8 316 aaPredicted RBP18.53■□□□□ 0.56
USHBP1-203ENST00000431146 PEX10O60683 326 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms