RNA–Protein interactions for RNA: ENST00000429899.1

ATG4B-211, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 524 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-211ENST00000429899 BAATQ14032 418 aaPredicted RBP11.78□□□□□ -0.52
ATG4B-211ENST00000429899 HIC1Q14526 733 aa11.78□□□□□ -0.52
ATG4B-211ENST00000429899 PPP2R5BQ15173 497 aa11.78□□□□□ -0.52
ATG4B-211ENST00000429899 TOP1MTQ969P6 601 aa11.78□□□□□ -0.52
ATG4B-211ENST00000429899 CEP95Q96GE4 821 aa11.78□□□□□ -0.52
ATG4B-211ENST00000429899 HINFPQ9BQA5 517 aa11.78□□□□□ -0.52
ATG4B-211ENST00000429899 PUS7LQ9H0K6 701 aaKnown RBP11.78□□□□□ -0.52
ATG4B-211ENST00000429899 LMAN2LQ9H0V9 348 aa11.78□□□□□ -0.52
ATG4B-211ENST00000429899 HDAC6Q9UBN7 1215 aa11.78□□□□□ -0.52
ATG4B-211ENST00000429899 GTF2IRD1Q9UHL9 959 aa11.78□□□□□ -0.52
ATG4B-211ENST00000429899 FASNP49327 2511 aaKnown RBP11.77□□□□□ -0.53
ATG4B-211ENST00000429899 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.77□□□□□ -0.53
ATG4B-211ENST00000429899 C5orf67F2Z3F1 127 aa11.77□□□□□ -0.53
ATG4B-211ENST00000429899 FDX1P10109 184 aa11.77□□□□□ -0.53
ATG4B-211ENST00000429899 SP100P23497 879 aaPredicted RBP11.77□□□□□ -0.53
ATG4B-211ENST00000429899 HSPA4P34932 840 aa11.77□□□□□ -0.53
ATG4B-211ENST00000429899 STAT2P52630 851 aa11.77□□□□□ -0.53
ATG4B-211ENST00000429899 COASYQ13057 564 aa11.77□□□□□ -0.53
ATG4B-211ENST00000429899 SLFN13Q68D06 897 aa11.77□□□□□ -0.53
ATG4B-211ENST00000429899 ADGRD2Q7Z7M1 963 aa11.77□□□□□ -0.53
ATG4B-211ENST00000429899 AMOTL1Q8IY63 956 aa11.77□□□□□ -0.53
ATG4B-211ENST00000429899 GMCL1P1Q8NEA9 526 aa11.77□□□□□ -0.53
ATG4B-211ENST00000429899 AFG1LQ8WV93 481 aa11.77□□□□□ -0.53
ATG4B-211ENST00000429899 KIF2CQ99661 725 aa11.77□□□□□ -0.53
ATG4B-211ENST00000429899 DLL3Q9NYJ7 618 aa11.77□□□□□ -0.53
ATG4B-211ENST00000429899 BARX2Q9UMQ3 279 aaPredicted RBP11.77□□□□□ -0.53
ATG4B-211ENST00000429899 NFIBO00712 420 aa11.76□□□□□ -0.53
ATG4B-211ENST00000429899 NKRFO15226 690 aaKnown RBP eCLIP11.76□□□□□ -0.539e-11■■□□□ 11.5
ATG4B-211ENST00000429899 GPAA1O43292 621 aa11.76□□□□□ -0.53
ATG4B-211ENST00000429899 GLP2RO95838 553 aa11.76□□□□□ -0.53
ATG4B-211ENST00000429899 MMP3P08254 477 aa11.76□□□□□ -0.53
ATG4B-211ENST00000429899 TXNP10599 105 aaKnown RBP11.76□□□□□ -0.53
ATG4B-211ENST00000429899 PLEKHG4Q58EX7 1191 aa11.76□□□□□ -0.53
ATG4B-211ENST00000429899 VPS53Q5VIR6 699 aa11.76□□□□□ -0.53
ATG4B-211ENST00000429899 ASTLQ6HA08 431 aaPredicted RBP11.76□□□□□ -0.53
ATG4B-211ENST00000429899 RASGRP2Q7LDG7 609 aa11.76□□□□□ -0.53
ATG4B-211ENST00000429899 FIBCD1Q8N539 461 aa11.76□□□□□ -0.53
ATG4B-211ENST00000429899 MAP4K1Q92918 833 aa11.76□□□□□ -0.53
ATG4B-211ENST00000429899 KCNB2Q92953 911 aa11.76□□□□□ -0.53
ATG4B-211ENST00000429899 C11orf84Q9BUA3 381 aaPredicted RBP11.76□□□□□ -0.53
ATG4B-211ENST00000429899 DSCC1Q9BVC3 393 aa11.76□□□□□ -0.53
ATG4B-211ENST00000429899 MTMR4Q9NYA4 1195 aa11.76□□□□□ -0.53
ATG4B-211ENST00000429899 ADD3Q9UEY8 706 aaKnown RBP11.76□□□□□ -0.53
ATG4B-211ENST00000429899 ISY1Q9ULR0 285 aaKnown RBP11.76□□□□□ -0.53
ATG4B-211ENST00000429899 SLC4A4Q9Y6R1 1079 aa11.76□□□□□ -0.53
ATG4B-211ENST00000429899 ZMYM6O95789 1325 aa11.76□□□□□ -0.53
ATG4B-211ENST00000429899 OTOGLQ3ZCN5 2332 aa11.76□□□□□ -0.53
ATG4B-211ENST00000429899 SETXQ7Z333 2677 aaKnown RBP11.75□□□□□ -0.53
ATG4B-211ENST00000429899 FNDC1Q4ZHG4 1894 aaPredicted RBP11.75□□□□□ -0.53
ATG4B-211ENST00000429899 PRDM1O75626 825 aa11.75□□□□□ -0.53
ATG4B-211ENST00000429899 LMNAP02545 664 aaKnown RBP11.75□□□□□ -0.53
ATG4B-211ENST00000429899 RB1P06400 928 aa11.75□□□□□ -0.53
ATG4B-211ENST00000429899 ARP10275 920 aa11.75□□□□□ -0.53
ATG4B-211ENST00000429899 DNAJB1P25685 340 aa11.75□□□□□ -0.53
ATG4B-211ENST00000429899 BMPR1AP36894 532 aa11.75□□□□□ -0.53
ATG4B-211ENST00000429899 IKQ13123 557 aaPredicted RBP11.75□□□□□ -0.53
ATG4B-211ENST00000429899 PTK7Q13308 1070 aa11.75□□□□□ -0.53
ATG4B-211ENST00000429899 RSPO4Q2I0M5 234 aaPredicted RBP11.75□□□□□ -0.53
ATG4B-211ENST00000429899 SLC30A10Q6XR72 485 aa11.75□□□□□ -0.53
ATG4B-211ENST00000429899 RBM23Q86U06 439 aaKnown RBP11.75□□□□□ -0.53
ATG4B-211ENST00000429899 KREMEN2Q8NCW0 462 aa11.75□□□□□ -0.53
ATG4B-211ENST00000429899 SCFD2Q8WU76 684 aa11.75□□□□□ -0.53
ATG4B-211ENST00000429899 STAG1Q8WVM7 1258 aa11.75□□□□□ -0.53
ATG4B-211ENST00000429899 CHAMP1Q96JM3 812 aa11.75□□□□□ -0.53
ATG4B-211ENST00000429899 IFIH1Q9BYX4 1025 aaKnown RBP11.75□□□□□ -0.53
ATG4B-211ENST00000429899 MFSD1Q9H3U5 465 aa11.75□□□□□ -0.53
ATG4B-211ENST00000429899 MKNK2Q9HBH9 465 aa11.75□□□□□ -0.53
ATG4B-211ENST00000429899 CCPG1Q9ULG6 757 aa11.75□□□□□ -0.53
ATG4B-211ENST00000429899 PRR12Q9ULL5 1215 aa11.75□□□□□ -0.53
ATG4B-211ENST00000429899 RBM8AQ9Y5S9 174 aaKnown RBP11.75□□□□□ -0.53
ATG4B-211ENST00000429899 TTLL1O95922 423 aa11.74□□□□□ -0.53
ATG4B-211ENST00000429899 MMP1P03956 469 aa11.74□□□□□ -0.53
ATG4B-211ENST00000429899 HSPD1P10809 573 aaKnown RBP11.74□□□□□ -0.53
ATG4B-211ENST00000429899 MCCP23508 829 aa11.74□□□□□ -0.53
ATG4B-211ENST00000429899 NRIP1P48552 1158 aa11.74□□□□□ -0.53
ATG4B-211ENST00000429899 ANAPC15P60006 121 aa11.74□□□□□ -0.53
ATG4B-211ENST00000429899 PDE4BQ07343 736 aa11.74□□□□□ -0.53
ATG4B-211ENST00000429899 ACAP1Q15027 740 aa11.74□□□□□ -0.53
ATG4B-211ENST00000429899 NECTIN1Q15223 517 aa11.74□□□□□ -0.53
ATG4B-211ENST00000429899 ANGPT1Q15389 498 aa11.74□□□□□ -0.53
ATG4B-211ENST00000429899 KCTD1Q719H9 257 aa11.74□□□□□ -0.53
ATG4B-211ENST00000429899 FAM160B2Q86V87 743 aa11.74□□□□□ -0.53
ATG4B-211ENST00000429899 EFHBQ8N7U6 833 aa11.74□□□□□ -0.53
ATG4B-211ENST00000429899 C7orf31Q8N865 590 aa11.74□□□□□ -0.53
ATG4B-211ENST00000429899 CHURC1Q8WUH1 139 aa11.74□□□□□ -0.53
ATG4B-211ENST00000429899 PPP2R3CQ969Q6 453 aa11.74□□□□□ -0.53
ATG4B-211ENST00000429899 STRBPQ96SI9 672 aaKnown RBP11.74□□□□□ -0.53
ATG4B-211ENST00000429899 ALG1Q9BT22 464 aa11.74□□□□□ -0.53
ATG4B-211ENST00000429899 SMOC2Q9H3U7 446 aa11.74□□□□□ -0.53
ATG4B-211ENST00000429899 EPB41L4AQ9HCS5 686 aaPredicted RBP11.74□□□□□ -0.53
ATG4B-211ENST00000429899 ARPP21Q9UBL0 812 aaPredicted RBP11.74□□□□□ -0.53
ATG4B-211ENST00000429899 EMSYQ7Z589 1322 aa11.74□□□□□ -0.53
ATG4B-211ENST00000429899 LOC102724159A0A0B4J2E5 919 aa11.73□□□□□ -0.53
ATG4B-211ENST00000429899 PTPDC1A2A3K4 754 aa11.73□□□□□ -0.53
ATG4B-211ENST00000429899 RSPH10B2B2RC85 870 aa11.73□□□□□ -0.53
ATG4B-211ENST00000429899 BRD1O95696 1058 aa11.73□□□□□ -0.53
ATG4B-211ENST00000429899 RSPH10BP0C881 870 aa11.73□□□□□ -0.53
ATG4B-211ENST00000429899 HOXB3P14651 431 aaPredicted RBP11.73□□□□□ -0.53
ATG4B-211ENST00000429899 EDNRBP24530 442 aa11.73□□□□□ -0.53
ATG4B-211ENST00000429899 THPOP40225 353 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms