RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 GIMAP8Q8ND71 665 aaPredicted RBP8.88□□□□□ -0.99
HPS4-205ENST00000429411 JDP2Q8WYK2 163 aa8.88□□□□□ -0.99
HPS4-205ENST00000429411 YY1AP1Q9H869 796 aa8.88□□□□□ -0.99
HPS4-205ENST00000429411 EPB41L5Q9HCM4 733 aa8.88□□□□□ -0.99
HPS4-205ENST00000429411 DDX25Q9UHL0 483 aaKnown RBP8.88□□□□□ -0.99
HPS4-205ENST00000429411 ITIH6Q6UXX5 1313 aa8.88□□□□□ -0.99
HPS4-205ENST00000429411 SFI1A8K8P3 1242 aa8.88□□□□□ -0.99
HPS4-205ENST00000429411 EBAG9O00559 213 aa8.88□□□□□ -0.99
HPS4-205ENST00000429411 KCNK3O14649 394 aa8.88□□□□□ -0.99
HPS4-205ENST00000429411 RASA1P20936 1047 aa8.88□□□□□ -0.99
HPS4-205ENST00000429411 STAT3P40763 770 aa8.88□□□□□ -0.99
HPS4-205ENST00000429411 ZYXQ15942 572 aaKnown RBP8.88□□□□□ -0.99
HPS4-205ENST00000429411 PRR16Q569H4 304 aa8.88□□□□□ -0.99
HPS4-205ENST00000429411 TTI2Q6NXR4 508 aa8.88□□□□□ -0.99
HPS4-205ENST00000429411 CCDC84Q86UT8 332 aaPredicted RBP8.88□□□□□ -0.99
HPS4-205ENST00000429411 RETREG2Q8NC44 543 aa8.88□□□□□ -0.99
HPS4-205ENST00000429411 BANK1Q8NDB2 785 aa8.88□□□□□ -0.99
HPS4-205ENST00000429411 VTI1AQ96AJ9 217 aa8.88□□□□□ -0.99
HPS4-205ENST00000429411 TSGA10Q9BZW7 698 aa8.88□□□□□ -0.99
HPS4-205ENST00000429411 ZC3H12CQ9C0D7 883 aaKnown RBP8.88□□□□□ -0.99
HPS4-205ENST00000429411 DMGDHQ9UI17 866 aaKnown RBP8.88□□□□□ -0.99
HPS4-205ENST00000429411 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.88□□□□□ -0.99
HPS4-205ENST00000429411 TMEM110-MUSTN1A8MSY1 372 aa8.88□□□□□ -0.99
HPS4-205ENST00000429411 NDUFAB1O14561 156 aa8.88□□□□□ -0.99
HPS4-205ENST00000429411 EPHB6O15197 1021 aa8.88□□□□□ -0.99
HPS4-205ENST00000429411 PPIP5K2O43314 1243 aa8.88□□□□□ -0.99
HPS4-205ENST00000429411 SRGNP10124 158 aa8.88□□□□□ -0.99
HPS4-205ENST00000429411 UBXN2AP68543 259 aa8.88□□□□□ -0.99
HPS4-205ENST00000429411 SF3B3Q15393 1217 aaKnown RBP8.88□□□□□ -0.99
HPS4-205ENST00000429411 NBPF20Q3BBV1 942 aa8.88□□□□□ -0.99
HPS4-205ENST00000429411 CT47A1Q5JQC4 288 aaPredicted RBP8.88□□□□□ -0.99
HPS4-205ENST00000429411 WDR59Q6PJI9 974 aa8.88□□□□□ -0.99
HPS4-205ENST00000429411 ELOA2Q8IYF1 753 aaPredicted RBP8.88□□□□□ -0.99
HPS4-205ENST00000429411 SH2D3CQ8N5H7 860 aa8.88□□□□□ -0.99
HPS4-205ENST00000429411 CCDC43Q96MW1 224 aaKnown RBP8.88□□□□□ -0.99
HPS4-205ENST00000429411 NUDT12Q9BQG2 462 aa8.88□□□□□ -0.99
HPS4-205ENST00000429411 NFU1Q9UMS0 254 aa8.88□□□□□ -0.99
HPS4-205ENST00000429411 HYOU1Q9Y4L1 999 aa8.88□□□□□ -0.99
HPS4-205ENST00000429411 BAZ2AQ9UIF9 1905 aaKnown RBP8.87□□□□□ -0.99
HPS4-205ENST00000429411 PDE2AO00408 941 aaPredicted RBP8.87□□□□□ -0.99
HPS4-205ENST00000429411 RGL2O15211 777 aa8.87□□□□□ -0.99
HPS4-205ENST00000429411 CLIC2O15247 247 aa8.87□□□□□ -0.99
HPS4-205ENST00000429411 SLC37A4O43826 429 aa8.87□□□□□ -0.99
HPS4-205ENST00000429411 RHOBTB3O94955 611 aa8.87□□□□□ -0.99
HPS4-205ENST00000429411 MYBL2P10244 700 aa8.87□□□□□ -0.99
HPS4-205ENST00000429411 ABCB4P21439 1286 aa8.87□□□□□ -0.99
HPS4-205ENST00000429411 PBX1P40424 430 aa8.87□□□□□ -0.99
HPS4-205ENST00000429411 MAN2A1Q16706 1144 aa8.87□□□□□ -0.99
HPS4-205ENST00000429411 CLEC4GQ6UXB4 293 aa8.87□□□□□ -0.99
HPS4-205ENST00000429411 CCDC65Q8IXS2 484 aa8.87□□□□□ -0.99
HPS4-205ENST00000429411 SPICE1Q8N0Z3 855 aa8.87□□□□□ -0.99
HPS4-205ENST00000429411 TNFRSF25Q93038 417 aa8.87□□□□□ -0.99
HPS4-205ENST00000429411 DUSP9Q99956 384 aaKnown RBP8.87□□□□□ -0.99
HPS4-205ENST00000429411 EHD4Q9H223 541 aa8.87□□□□□ -0.99
HPS4-205ENST00000429411 PSTPIP2Q9H939 334 aa8.87□□□□□ -0.99
HPS4-205ENST00000429411 DBNDD1Q9H9R9 158 aa8.87□□□□□ -0.99
HPS4-205ENST00000429411 USP40Q9NVE5 1235 aa8.87□□□□□ -0.99
HPS4-205ENST00000429411 POTEB3A0JP26 581 aa8.87□□□□□ -0.99
HPS4-205ENST00000429411 TLDC2A0PJX2 215 aa8.87□□□□□ -0.99
HPS4-205ENST00000429411 POTECB2RU33 542 aa8.87□□□□□ -0.99
HPS4-205ENST00000429411 TUBBP07437 444 aa8.87□□□□□ -0.99
HPS4-205ENST00000429411 MRPL12P52815 198 aaKnown RBP8.87□□□□□ -0.99
HPS4-205ENST00000429411 TUBB4BP68371 445 aa8.87□□□□□ -0.99
HPS4-205ENST00000429411 ADAM9Q13443 819 aa8.87□□□□□ -0.99
HPS4-205ENST00000429411 POTEBQ6S5H4 581 aa8.87□□□□□ -0.99
HPS4-205ENST00000429411 TAX1BP1Q86VP1 789 aa8.87□□□□□ -0.99
HPS4-205ENST00000429411 KIAA0825Q8IV33 1275 aa8.87□□□□□ -0.99
HPS4-205ENST00000429411 ANKRD13AQ8IZ07 590 aa8.87□□□□□ -0.99
HPS4-205ENST00000429411 MED4Q9NPJ6 270 aa8.87□□□□□ -0.99
HPS4-205ENST00000429411 MYH8P13535 1937 aa8.87□□□□□ -0.99
HPS4-205ENST00000429411 ZSCAN5CA6NGD5 496 aaPredicted RBP8.86□□□□□ -0.99
HPS4-205ENST00000429411 TBCAO75347 108 aaKnown RBP8.86□□□□□ -0.99
HPS4-205ENST00000429411 HEXIM1O94992 359 aaKnown RBP8.86□□□□□ -0.99
HPS4-205ENST00000429411 AKR1B1P15121 316 aa8.86□□□□□ -0.99
HPS4-205ENST00000429411 IFFO1Q0D2I5 559 aa8.86□□□□□ -0.99
HPS4-205ENST00000429411 PDCLQ13371 301 aa8.86□□□□□ -0.99
HPS4-205ENST00000429411 CFAP221Q4G0U5 840 aa8.86□□□□□ -0.99
HPS4-205ENST00000429411 OSBPL9Q96SU4 736 aa8.86□□□□□ -0.99
HPS4-205ENST00000429411 SEMA6BQ9H3T3 888 aa8.86□□□□□ -0.99
HPS4-205ENST00000429411 ZBTB21Q9ULJ3 1066 aa8.86□□□□□ -0.99
HPS4-205ENST00000429411 JRKLQ9Y4A0 524 aa8.86□□□□□ -0.99
HPS4-205ENST00000429411 PDS5AQ29RF7 1337 aaKnown RBP8.86□□□□□ -0.99
HPS4-205ENST00000429411 USP17L10C9JJH3 530 aa8.86□□□□□ -0.99
HPS4-205ENST00000429411 CETN3O15182 167 aa8.86□□□□□ -0.99
HPS4-205ENST00000429411 GRIN3BO60391 1043 aa8.86□□□□□ -0.99
HPS4-205ENST00000429411 PALMO75781 387 aa8.86□□□□□ -0.99
HPS4-205ENST00000429411 HLA-DOAP06340 250 aa8.86□□□□□ -0.99
HPS4-205ENST00000429411 TAL1P17542 331 aaPredicted RBP8.86□□□□□ -0.99
HPS4-205ENST00000429411 ASIC2Q16515 512 aa8.86□□□□□ -0.99
HPS4-205ENST00000429411 TTC31Q49AM3 519 aaPredicted RBP8.86□□□□□ -0.99
HPS4-205ENST00000429411 SLC30A10Q6XR72 485 aa8.86□□□□□ -0.99
HPS4-205ENST00000429411 TRAPPC11Q7Z392 1133 aa8.86□□□□□ -0.99
HPS4-205ENST00000429411 SLF2Q8IX21 1173 aa8.86□□□□□ -0.99
HPS4-205ENST00000429411 KIAA0895Q8NCT3 520 aa8.86□□□□□ -0.99
HPS4-205ENST00000429411 MSANTD4Q8NCY6 345 aa8.86□□□□□ -0.99
HPS4-205ENST00000429411 SPATA4Q8NEY3 305 aa8.86□□□□□ -0.99
HPS4-205ENST00000429411 UHMK1Q8TAS1 419 aaKnown RBP8.86□□□□□ -0.99
HPS4-205ENST00000429411 UBLCP1Q8WVY7 318 aaPredicted RBP8.86□□□□□ -0.99
HPS4-205ENST00000429411 AP1M1Q9BXS5 423 aa8.86□□□□□ -0.99
HPS4-205ENST00000429411 CCSER1Q9C0I3 900 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms