RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 CCDC40Q4G0X9 1142 aa15.17■□□□□ 0.02
THBS3-202ENST00000428962 RSBN1LQ6PCB5 846 aaPredicted RBP15.17■□□□□ 0.02
THBS3-202ENST00000428962 RTKN2Q8IZC4 609 aa15.17■□□□□ 0.02
THBS3-202ENST00000428962 CCDC42Q96M95 316 aa15.17■□□□□ 0.02
THBS3-202ENST00000428962 FRMD3A2A2Y4 597 aa15.16■□□□□ 0.02
THBS3-202ENST00000428962 TRAF5O00463 557 aa15.16■□□□□ 0.02
THBS3-202ENST00000428962 MED24O75448 989 aa15.16■□□□□ 0.02
THBS3-202ENST00000428962 ZRANB2O95218 330 aaKnown RBP eCLIP15.16■□□□□ 0.02
THBS3-202ENST00000428962 CYP3A4P08684 503 aa15.16■□□□□ 0.02
THBS3-202ENST00000428962 CYP11B2P19099 503 aa15.16■□□□□ 0.02
THBS3-202ENST00000428962 RPA1P27694 616 aa15.16■□□□□ 0.02
THBS3-202ENST00000428962 GABPB1Q06547 395 aaPredicted RBP15.16■□□□□ 0.02
THBS3-202ENST00000428962 LRRC41Q15345 812 aa15.16■□□□□ 0.02
THBS3-202ENST00000428962 NCAPH2Q6IBW4 605 aa15.16■□□□□ 0.02
THBS3-202ENST00000428962 NEK11Q8NG66 645 aa15.16■□□□□ 0.02
THBS3-202ENST00000428962 FAM151AQ8WW52 585 aa15.16■□□□□ 0.02
THBS3-202ENST00000428962 PRR12Q9ULL5 1215 aa15.16■□□□□ 0.02
THBS3-202ENST00000428962 MYO6Q9UM54 1294 aa15.16■□□□□ 0.02
THBS3-202ENST00000428962 PLAGL2Q9UPG8 496 aa15.16■□□□□ 0.02
THBS3-202ENST00000428962 DNM3Q9UQ16 869 aa15.16■□□□□ 0.02
THBS3-202ENST00000428962 CD2APQ9Y5K6 639 aa15.16■□□□□ 0.02
THBS3-202ENST00000428962 CTAGE15A4D2H0 777 aa15.15■□□□□ 0.02
THBS3-202ENST00000428962 C21orf2O43822 256 aa15.15■□□□□ 0.02
THBS3-202ENST00000428962 CTAGE8P0CG41 777 aa15.15■□□□□ 0.02
THBS3-202ENST00000428962 STAT3P40763 770 aa15.15■□□□□ 0.02
THBS3-202ENST00000428962 SLC12A3P55017 1021 aa15.15■□□□□ 0.02
THBS3-202ENST00000428962 SPIRE1Q08AE8 756 aa15.15■□□□□ 0.02
THBS3-202ENST00000428962 BRD3Q15059 726 aa15.15■□□□□ 0.02
THBS3-202ENST00000428962 DLGAP5Q15398 846 aa15.15■□□□□ 0.02
THBS3-202ENST00000428962 HERC4Q5GLZ8 1057 aaPredicted RBP15.15■□□□□ 0.02
THBS3-202ENST00000428962 CTAGE6Q86UF2 777 aa15.15■□□□□ 0.02
THBS3-202ENST00000428962 CTAGE4Q8IX94 777 aa15.15■□□□□ 0.02
THBS3-202ENST00000428962 TXLNBQ8N3L3 684 aa15.15■□□□□ 0.02
THBS3-202ENST00000428962 OGFOD1Q8N543 542 aa15.15■□□□□ 0.02
THBS3-202ENST00000428962 LENG9Q96B70 501 aa15.15■□□□□ 0.02
THBS3-202ENST00000428962 PSMD1Q99460 953 aa15.15■□□□□ 0.02
THBS3-202ENST00000428962 TANGO6Q9C0B7 1094 aa15.15■□□□□ 0.02
THBS3-202ENST00000428962 NUCKS1Q9H1E3 243 aaKnown RBP15.15■□□□□ 0.02
THBS3-202ENST00000428962 MMRN2Q9H8L6 949 aa15.15■□□□□ 0.02
THBS3-202ENST00000428962 EHMT1Q9H9B1 1298 aa15.15■□□□□ 0.02
THBS3-202ENST00000428962 PCDHA2Q9Y5H9 948 aa15.15■□□□□ 0.02
THBS3-202ENST00000428962 POTEFA5A3E0 1075 aa15.15■□□□□ 0.02
THBS3-202ENST00000428962 CCDC151A5D8V7 595 aa15.15■□□□□ 0.02
THBS3-202ENST00000428962 TCP10L2B9ZVM9 353 aa15.15■□□□□ 0.02
THBS3-202ENST00000428962 USO1O60763 962 aaKnown RBP15.15■□□□□ 0.02
THBS3-202ENST00000428962 TUBBP07437 444 aa15.15■□□□□ 0.02
THBS3-202ENST00000428962 POTEIP0CG38 1075 aa15.15■□□□□ 0.02
THBS3-202ENST00000428962 PNMA6AP0CW24 399 aaPredicted RBP15.15■□□□□ 0.02
THBS3-202ENST00000428962 ZNF76P36508 570 aa15.15■□□□□ 0.02
THBS3-202ENST00000428962 VAV2P52735 878 aa15.15■□□□□ 0.02
THBS3-202ENST00000428962 MARSP56192 900 aaKnown RBP15.15■□□□□ 0.02
THBS3-202ENST00000428962 SNAP25P60880 206 aa15.15■□□□□ 0.02
THBS3-202ENST00000428962 AMPD2Q01433 879 aa15.15■□□□□ 0.02
THBS3-202ENST00000428962 KIF5AQ12840 1032 aa15.15■□□□□ 0.02
THBS3-202ENST00000428962 EDRF1Q3B7T1 1238 aa15.15■□□□□ 0.02
THBS3-202ENST00000428962 POTEGQ6S5H5 508 aa15.15■□□□□ 0.02
THBS3-202ENST00000428962 POTEEQ6S8J3 1075 aa15.15■□□□□ 0.02
THBS3-202ENST00000428962 SH2D4AQ9H788 454 aa15.15■□□□□ 0.02
THBS3-202ENST00000428962 ARFGAP3Q9NP61 516 aa15.15■□□□□ 0.02
THBS3-202ENST00000428962 FAM207AQ9NSI2 230 aaPredicted RBP15.15■□□□□ 0.02
THBS3-202ENST00000428962 PUF60Q9UHX1 559 aaKnown RBP15.15■□□□□ 0.02
THBS3-202ENST00000428962 TMX2Q9Y320 296 aa15.15■□□□□ 0.02
THBS3-202ENST00000428962 FHOD1Q9Y613 1164 aa15.15■□□□□ 0.02
THBS3-202ENST00000428962 A0A1W2PRG0 241 aa15.14■□□□□ 0.01
THBS3-202ENST00000428962 ANO9A1A5B4 782 aa15.14■□□□□ 0.01
THBS3-202ENST00000428962 ABL1P00519 1130 aa15.14■□□□□ 0.01
THBS3-202ENST00000428962 CC2D1AQ6P1N0 951 aaPredicted RBP15.14■□□□□ 0.01
THBS3-202ENST00000428962 CACNA2D4Q7Z3S7 1137 aa15.14■□□□□ 0.01
THBS3-202ENST00000428962 CATSPER3Q86XQ3 398 aa15.14■□□□□ 0.01
THBS3-202ENST00000428962 TTLL6Q8N841 843 aa15.14■□□□□ 0.01
THBS3-202ENST00000428962 SYT2Q8N9I0 419 aaPredicted RBP15.14■□□□□ 0.01
THBS3-202ENST00000428962 GLIS3Q8NEA6 775 aa15.14■□□□□ 0.01
THBS3-202ENST00000428962 NLGN2Q8NFZ4 835 aa15.14■□□□□ 0.01
THBS3-202ENST00000428962 CHURC1Q8WUH1 139 aa15.14■□□□□ 0.01
THBS3-202ENST00000428962 POLR3CQ9BUI4 534 aaPredicted RBP15.14■□□□□ 0.01
THBS3-202ENST00000428962 PARD6BQ9BYG5 372 aa15.14■□□□□ 0.01
THBS3-202ENST00000428962 DEF6Q9H4E7 631 aa15.14■□□□□ 0.01
THBS3-202ENST00000428962 EMILIN3Q9NT22 766 aa15.14■□□□□ 0.01
THBS3-202ENST00000428962 ZNF70Q9UC06 446 aaPredicted RBP15.14■□□□□ 0.01
THBS3-202ENST00000428962 FAM184BQ9ULE4 1060 aa15.14■□□□□ 0.01
THBS3-202ENST00000428962 FAM86B1E9PN63 330 aa15.13■□□□□ 0.01
THBS3-202ENST00000428962 MSH4O15457 936 aa15.13■□□□□ 0.01
THBS3-202ENST00000428962 VIL1P09327 827 aaKnown RBP15.13■□□□□ 0.01
THBS3-202ENST00000428962 FAM86B2P0C5J1 330 aa15.13■□□□□ 0.01
THBS3-202ENST00000428962 JAG1P78504 1218 aa15.13■□□□□ 0.01
THBS3-202ENST00000428962 CKAP4Q07065 602 aaKnown RBP15.13■□□□□ 0.01
THBS3-202ENST00000428962 RRP1BQ14684 758 aaKnown RBP15.13■□□□□ 0.01
THBS3-202ENST00000428962 FKBP1CQ5VVH2 108 aa15.13■□□□□ 0.01
THBS3-202ENST00000428962 TRAPPC11Q7Z392 1133 aa15.13■□□□□ 0.01
THBS3-202ENST00000428962 ZC3H3Q8IXZ2 948 aaKnown RBP15.13■□□□□ 0.01
THBS3-202ENST00000428962 MSANTD4Q8NCY6 345 aa15.13■□□□□ 0.01
THBS3-202ENST00000428962 P2RX7Q99572 595 aaKnown RBP15.13■□□□□ 0.01
THBS3-202ENST00000428962 VPS33BQ9H267 617 aa15.13■□□□□ 0.01
THBS3-202ENST00000428962 ZSWIM4Q9H7M6 989 aa15.13■□□□□ 0.01
THBS3-202ENST00000428962 TRIM10Q9UDY6 481 aa15.13■□□□□ 0.01
THBS3-202ENST00000428962 ZBTB21Q9ULJ3 1066 aa15.13■□□□□ 0.01
THBS3-202ENST00000428962 OPLAHO14841 1288 aa15.13■□□□□ 0.01
THBS3-202ENST00000428962 ERLIN1O75477 346 aa15.13■□□□□ 0.01
THBS3-202ENST00000428962 ZSCAN20P17040 1043 aaPredicted RBP15.13■□□□□ 0.01
THBS3-202ENST00000428962 GPR162Q16538 588 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms