RNA–Protein interactions for RNA: ENST00000428767.1

ALMS1P1-201, Transcript of ALMS1, centrosome and basal body associated protein pseudogene 1, humanhuman

BASIC

Gene ALMS1P1, Length 921 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1P1-201ENST00000428767 LINC00271P0C7V0 271 aa13.62□□□□□ -0.23
ALMS1P1-201ENST00000428767 PDHBP11177 359 aa13.62□□□□□ -0.23
ALMS1P1-201ENST00000428767 TOP1P11387 765 aaKnown RBP13.62□□□□□ -0.23
ALMS1P1-201ENST00000428767 EIF2AK2P19525 551 aaKnown RBP13.62□□□□□ -0.23
ALMS1P1-201ENST00000428767 LAMC2Q13753 1193 aa13.62□□□□□ -0.23
ALMS1P1-201ENST00000428767 RRP12Q5JTH9 1297 aaKnown RBP13.62□□□□□ -0.23
ALMS1P1-201ENST00000428767 SMRP1Q8NCR6 262 aa13.62□□□□□ -0.23
ALMS1P1-201ENST00000428767 SYTL5Q8TDW5 730 aaPredicted RBP13.62□□□□□ -0.23
ALMS1P1-201ENST00000428767 EMID1Q96A84 441 aaPredicted RBP13.62□□□□□ -0.23
ALMS1P1-201ENST00000428767 ASIC4Q96FT7 647 aa13.62□□□□□ -0.23
ALMS1P1-201ENST00000428767 IRF2BPLQ9H1B7 796 aa13.62□□□□□ -0.23
ALMS1P1-201ENST00000428767 CLEC1BQ9P126 229 aa13.62□□□□□ -0.23
ALMS1P1-201ENST00000428767 BARX2Q9UMQ3 279 aaPredicted RBP13.62□□□□□ -0.23
ALMS1P1-201ENST00000428767 USP15Q9Y4E8 981 aaPredicted RBP13.62□□□□□ -0.23
ALMS1P1-201ENST00000428767 TTC3P53804 2025 aa13.62□□□□□ -0.23
ALMS1P1-201ENST00000428767 LOXHD1Q8IVV2 1947 aa13.62□□□□□ -0.23
ALMS1P1-201ENST00000428767 CACNA1BQ00975 2339 aa13.61□□□□□ -0.23
ALMS1P1-201ENST00000428767 C17orf102A2RUQ5 167 aa13.61□□□□□ -0.23
ALMS1P1-201ENST00000428767 TREHO43280 583 aa13.61□□□□□ -0.23
ALMS1P1-201ENST00000428767 MMP1P03956 469 aa13.61□□□□□ -0.23
ALMS1P1-201ENST00000428767 NOVP48745 357 aa13.61□□□□□ -0.23
ALMS1P1-201ENST00000428767 ZNF543Q08ER8 600 aa13.61□□□□□ -0.23
ALMS1P1-201ENST00000428767 CBX2Q14781 532 aaPredicted RBP13.61□□□□□ -0.23
ALMS1P1-201ENST00000428767 NSUN6Q8TEA1 469 aaKnown RBP13.61□□□□□ -0.23
ALMS1P1-201ENST00000428767 RMDN3Q96TC7 470 aa13.61□□□□□ -0.23
ALMS1P1-201ENST00000428767 PNMA2Q9UL42 364 aa13.61□□□□□ -0.23
ALMS1P1-201ENST00000428767 RWDD3Q9Y3V2 267 aa13.61□□□□□ -0.23
ALMS1P1-201ENST00000428767 GOLGA8HP0CJ92 632 aa13.6□□□□□ -0.23
ALMS1P1-201ENST00000428767 SMIM10L2AP0DMW4 78 aa13.6□□□□□ -0.23
ALMS1P1-201ENST00000428767 SMIM10L2BP0DMW5 78 aa13.6□□□□□ -0.23
ALMS1P1-201ENST00000428767 CAMK1Q14012 370 aa13.6□□□□□ -0.23
ALMS1P1-201ENST00000428767 BTG3Q14201 252 aaPredicted RBP13.6□□□□□ -0.23
ALMS1P1-201ENST00000428767 HSDL1Q3SXM5 330 aa13.6□□□□□ -0.23
ALMS1P1-201ENST00000428767 ARHGEF16Q5VV41 709 aa13.6□□□□□ -0.23
ALMS1P1-201ENST00000428767 ERMP1Q7Z2K6 904 aa13.6□□□□□ -0.23
ALMS1P1-201ENST00000428767 RBM23Q86U06 439 aaKnown RBP13.6□□□□□ -0.23
ALMS1P1-201ENST00000428767 SPATA33Q96N06 139 aa13.6□□□□□ -0.23
ALMS1P1-201ENST00000428767 TRPC6Q9Y210 931 aa13.6□□□□□ -0.23
ALMS1P1-201ENST00000428767 GVINP1Q7Z2Y8 2422 aa13.6□□□□□ -0.23
ALMS1P1-201ENST00000428767 PROB1E7EW31 1015 aa13.59□□□□□ -0.23
ALMS1P1-201ENST00000428767 FOXP2O15409 715 aa13.59□□□□□ -0.23
ALMS1P1-201ENST00000428767 GGPS1O95749 300 aa13.59□□□□□ -0.23
ALMS1P1-201ENST00000428767 GLP2RO95838 553 aa13.59□□□□□ -0.23
ALMS1P1-201ENST00000428767 MYCLP12524 364 aaPredicted RBP13.59□□□□□ -0.23
ALMS1P1-201ENST00000428767 HOXD8P13378 290 aaPredicted RBP13.59□□□□□ -0.23
ALMS1P1-201ENST00000428767 DNAJB1P25685 340 aa13.59□□□□□ -0.23
ALMS1P1-201ENST00000428767 ID4P47928 161 aa13.59□□□□□ -0.23
ALMS1P1-201ENST00000428767 NRIP1P48552 1158 aa13.59□□□□□ -0.23
ALMS1P1-201ENST00000428767 APBB2Q92870 758 aa13.59□□□□□ -0.23
ALMS1P1-201ENST00000428767 CLP1Q92989 425 aaKnown RBP13.59□□□□□ -0.23
ALMS1P1-201ENST00000428767 PPP2R3CQ969Q6 453 aa13.59□□□□□ -0.23
ALMS1P1-201ENST00000428767 GPATCH3Q96I76 525 aa13.59□□□□□ -0.23
ALMS1P1-201ENST00000428767 IWS1Q96ST2 819 aa13.59□□□□□ -0.23
ALMS1P1-201ENST00000428767 PHF7Q9BWX1 381 aaPredicted RBP13.59□□□□□ -0.23
ALMS1P1-201ENST00000428767 RC3H2Q9HBD1 1191 aaKnown RBP13.59□□□□□ -0.23
ALMS1P1-201ENST00000428767 ZBTB40Q9NUA8 1239 aa13.59□□□□□ -0.23
ALMS1P1-201ENST00000428767 PCDHGC5Q9Y5F6 944 aa13.59□□□□□ -0.23
ALMS1P1-201ENST00000428767 GALR2O43603 387 aaPredicted RBP13.58□□□□□ -0.24
ALMS1P1-201ENST00000428767 ORC4O43929 436 aa13.58□□□□□ -0.24
ALMS1P1-201ENST00000428767 SP100P23497 879 aaPredicted RBP13.58□□□□□ -0.24
ALMS1P1-201ENST00000428767 COASYQ13057 564 aa13.58□□□□□ -0.24
ALMS1P1-201ENST00000428767 CDC37Q16543 378 aaPredicted RBP13.58□□□□□ -0.24
ALMS1P1-201ENST00000428767 ZMYM1Q5SVZ6 1142 aa13.58□□□□□ -0.24
ALMS1P1-201ENST00000428767 MYSM1Q5VVJ2 828 aa13.58□□□□□ -0.24
ALMS1P1-201ENST00000428767 ZBTB33Q86T24 672 aa13.58□□□□□ -0.24
ALMS1P1-201ENST00000428767 EFHBQ8N7U6 833 aa13.58□□□□□ -0.24
ALMS1P1-201ENST00000428767 RGS22Q8NE09 1264 aa13.58□□□□□ -0.24
ALMS1P1-201ENST00000428767 C16orf70Q9BSU1 422 aa13.58□□□□□ -0.24
ALMS1P1-201ENST00000428767 UBA5Q9GZZ9 404 aa13.58□□□□□ -0.24
ALMS1P1-201ENST00000428767 RNPEPQ9H4A4 650 aa13.58□□□□□ -0.24
ALMS1P1-201ENST00000428767 PXMP2Q9NR77 195 aa13.58□□□□□ -0.24
ALMS1P1-201ENST00000428767 PLAGL2Q9UPG8 496 aa13.58□□□□□ -0.24
ALMS1P1-201ENST00000428767 SUPT16HQ9Y5B9 1047 aaKnown RBP13.58□□□□□ -0.24
ALMS1P1-201ENST00000428767 DNAH14Q0VDD8 3507 aa13.58□□□□□ -0.24
ALMS1P1-201ENST00000428767 ABCB11O95342 1321 aa13.58□□□□□ -0.24
ALMS1P1-201ENST00000428767 PPFIA4O75335 1185 aa13.57□□□□□ -0.24
ALMS1P1-201ENST00000428767 EIF3JO75822 258 aaKnown RBP13.57□□□□□ -0.24
ALMS1P1-201ENST00000428767 ITGB1P05556 798 aa13.57□□□□□ -0.24
ALMS1P1-201ENST00000428767 NR3C2P08235 984 aa13.57□□□□□ -0.24
ALMS1P1-201ENST00000428767 GHRP10912 638 aa13.57□□□□□ -0.24
ALMS1P1-201ENST00000428767 ICAM3P32942 547 aa13.57□□□□□ -0.24
ALMS1P1-201ENST00000428767 RBM10P98175 930 aaKnown RBP13.57□□□□□ -0.24
ALMS1P1-201ENST00000428767 PTPN21Q16825 1174 aa13.57□□□□□ -0.24
ALMS1P1-201ENST00000428767 CELF3Q5SZQ8 465 aaKnown RBP13.57□□□□□ -0.24
ALMS1P1-201ENST00000428767 VPS53Q5VIR6 699 aa13.57□□□□□ -0.24
ALMS1P1-201ENST00000428767 ZFP91Q96JP5 570 aaPredicted RBP13.57□□□□□ -0.24
ALMS1P1-201ENST00000428767 MRPL42Q9Y6G3 142 aaKnown RBP13.57□□□□□ -0.24
ALMS1P1-201ENST00000428767 CCDC171Q6TFL3 1326 aa13.57□□□□□ -0.24
ALMS1P1-201ENST00000428767 H3BRB1 525 aa13.56□□□□□ -0.24
ALMS1P1-201ENST00000428767 CAND2O75155 1236 aa13.56□□□□□ -0.24
ALMS1P1-201ENST00000428767 CFBP00751 764 aa13.56□□□□□ -0.24
ALMS1P1-201ENST00000428767 LGALS2P05162 132 aa13.56□□□□□ -0.24
ALMS1P1-201ENST00000428767 UBA1P22314 1058 aaKnown RBP13.56□□□□□ -0.24
ALMS1P1-201ENST00000428767 HOXC8P31273 242 aa13.56□□□□□ -0.24
ALMS1P1-201ENST00000428767 NBL1P41271 181 aa13.56□□□□□ -0.24
ALMS1P1-201ENST00000428767 PAN2Q504Q3 1202 aaKnown RBP13.56□□□□□ -0.24
ALMS1P1-201ENST00000428767 FRMD5Q7Z6J6 570 aa13.56□□□□□ -0.24
ALMS1P1-201ENST00000428767 MCF2L2Q86YR7 1114 aa13.56□□□□□ -0.24
ALMS1P1-201ENST00000428767 GPKOWQ92917 476 aaPredicted RBP eCLIP13.56□□□□□ -0.24
ALMS1P1-201ENST00000428767 PLVAPQ9BX97 442 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms