RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 FANCBQ8NB91 859 aa7.97□□□□□ -1.13
CNOT4-206ENST00000428680 PHKBQ93100 1093 aa7.97□□□□□ -1.13
CNOT4-206ENST00000428680 YME1L1Q96TA2 773 aa7.97□□□□□ -1.13
CNOT4-206ENST00000428680 TMEM39AQ9NV64 488 aa7.97□□□□□ -1.13
CNOT4-206ENST00000428680 MOSPD1Q9UJG1 213 aa7.97□□□□□ -1.13
CNOT4-206ENST00000428680 NEMP1O14524 444 aa7.96□□□□□ -1.13
CNOT4-206ENST00000428680 TRAK2O60296 914 aa7.96□□□□□ -1.13
CNOT4-206ENST00000428680 DLATP10515 647 aaKnown RBP7.96□□□□□ -1.13
CNOT4-206ENST00000428680 CCDC157Q569K6 752 aa7.96□□□□□ -1.13
CNOT4-206ENST00000428680 ANO1Q5XXA6 986 aa7.96□□□□□ -1.13
CNOT4-206ENST00000428680 KCNV1Q6PIU1 500 aa7.96□□□□□ -1.13
CNOT4-206ENST00000428680 TCP11Q8WWU5 503 aa7.96□□□□□ -1.13
CNOT4-206ENST00000428680 SYNDIG1Q9H7V2 258 aa7.96□□□□□ -1.13
CNOT4-206ENST00000428680 ODF2LQ9ULJ1 636 aa7.96□□□□□ -1.13
CNOT4-206ENST00000428680 ATRNL1Q5VV63 1379 aa7.96□□□□□ -1.13
CNOT4-206ENST00000428680 SNAP23O00161 211 aa7.96□□□□□ -1.13
CNOT4-206ENST00000428680 KIF5CO60282 957 aa7.96□□□□□ -1.13
CNOT4-206ENST00000428680 STAG3L1P0CL83 205 aa7.96□□□□□ -1.13
CNOT4-206ENST00000428680 SPECC1Q5M775 1068 aa7.96□□□□□ -1.13
CNOT4-206ENST00000428680 NECAB2Q7Z6G3 386 aa7.96□□□□□ -1.13
CNOT4-206ENST00000428680 PLEKHH3Q7Z736 793 aa7.96□□□□□ -1.13
CNOT4-206ENST00000428680 THNSL1Q8IYQ7 743 aa7.96□□□□□ -1.13
CNOT4-206ENST00000428680 LEO1Q8WVC0 666 aaPredicted RBP7.96□□□□□ -1.13
CNOT4-206ENST00000428680 CTAGE1Q96RT6 745 aa7.96□□□□□ -1.13
CNOT4-206ENST00000428680 WDR18Q9BV38 432 aa7.96□□□□□ -1.13
CNOT4-206ENST00000428680 DSCC1Q9BVC3 393 aa7.96□□□□□ -1.13
CNOT4-206ENST00000428680 TRAPPC3O43617 180 aa7.96□□□□□ -1.14
CNOT4-206ENST00000428680 CHMLP26374 656 aa7.96□□□□□ -1.14
CNOT4-206ENST00000428680 LACTBP83111 547 aaPredicted RBP7.96□□□□□ -1.14
CNOT4-206ENST00000428680 GALNT17Q6IS24 598 aa7.96□□□□□ -1.14
CNOT4-206ENST00000428680 NOP9Q86U38 636 aaKnown RBP7.96□□□□□ -1.14
CNOT4-206ENST00000428680 SHCBP1Q8NEM2 672 aa7.96□□□□□ -1.14
CNOT4-206ENST00000428680 LPAR1Q92633 364 aa7.96□□□□□ -1.14
CNOT4-206ENST00000428680 DDX12PQ92771 950 aa7.96□□□□□ -1.14
CNOT4-206ENST00000428680 CCDC127Q96BQ5 260 aa7.96□□□□□ -1.14
CNOT4-206ENST00000428680 TMEM169Q96HH4 297 aa7.96□□□□□ -1.14
CNOT4-206ENST00000428680 GCOM2Q9BZD3 368 aaPredicted RBP7.96□□□□□ -1.14
CNOT4-206ENST00000428680 GAKO14976 1311 aa7.96□□□□□ -1.14
CNOT4-206ENST00000428680 USP2O75604 605 aaPredicted RBP7.96□□□□□ -1.14
CNOT4-206ENST00000428680 DDAH1O94760 285 aa7.96□□□□□ -1.14
CNOT4-206ENST00000428680 CPB1P15086 417 aa7.96□□□□□ -1.14
CNOT4-206ENST00000428680 KIF11P52732 1056 aa7.96□□□□□ -1.14
CNOT4-206ENST00000428680 MYO1EQ12965 1108 aa7.96□□□□□ -1.14
CNOT4-206ENST00000428680 IER5Q5VY09 327 aa7.96□□□□□ -1.14
CNOT4-206ENST00000428680 ADALQ6DHV7 355 aa7.96□□□□□ -1.14
CNOT4-206ENST00000428680 CABP7Q86V35 215 aa7.96□□□□□ -1.14
CNOT4-206ENST00000428680 GPBP1Q86WP2 473 aa7.96□□□□□ -1.14
CNOT4-206ENST00000428680 NELFCDQ8IXH7 590 aa7.96□□□□□ -1.14
CNOT4-206ENST00000428680 SH3RF3Q8TEJ3 882 aaPredicted RBP7.96□□□□□ -1.14
CNOT4-206ENST00000428680 DYDC1Q8WWB3 177 aa7.96□□□□□ -1.14
CNOT4-206ENST00000428680 GPKOWQ92917 476 aaPredicted RBP eCLIP7.96□□□□□ -1.143e-6■■■■□ 20.4
CNOT4-206ENST00000428680 ANKRD36BP1Q96IX9 119 aa7.96□□□□□ -1.14
CNOT4-206ENST00000428680 GAS2L1Q99501 681 aaPredicted RBP7.96□□□□□ -1.14
CNOT4-206ENST00000428680 RAB23Q9ULC3 237 aa7.96□□□□□ -1.14
CNOT4-206ENST00000428680 COL4A3BPQ9Y5P4 624 aa7.96□□□□□ -1.14
CNOT4-206ENST00000428680 TAF1P21675 1872 aa7.96□□□□□ -1.14
CNOT4-206ENST00000428680 COL4A5P29400 1685 aa7.96□□□□□ -1.14
CNOT4-206ENST00000428680 GOLGA6CA6NDK9 693 aa7.95□□□□□ -1.14
CNOT4-206ENST00000428680 GOLGA6BA6NDN3 693 aa7.95□□□□□ -1.14
CNOT4-206ENST00000428680 MAP3K7O43318 606 aa7.95□□□□□ -1.14
CNOT4-206ENST00000428680 HMGCRP04035 888 aa7.95□□□□□ -1.14
CNOT4-206ENST00000428680 GOLGA6DP0CG33 693 aa7.95□□□□□ -1.14
CNOT4-206ENST00000428680 SCG2P13521 617 aa7.95□□□□□ -1.14
CNOT4-206ENST00000428680 PHKA2P46019 1235 aa7.95□□□□□ -1.14
CNOT4-206ENST00000428680 ATXN3P54252 364 aaPredicted RBP7.95□□□□□ -1.14
CNOT4-206ENST00000428680 OSTNP61366 133 aa7.95□□□□□ -1.14
CNOT4-206ENST00000428680 TSPY1Q01534 308 aa7.95□□□□□ -1.14
CNOT4-206ENST00000428680 IFFO1Q0D2I5 559 aa7.95□□□□□ -1.14
CNOT4-206ENST00000428680 SCN4BQ8IWT1 228 aa7.95□□□□□ -1.14
CNOT4-206ENST00000428680 EHD4Q9H223 541 aa7.95□□□□□ -1.14
CNOT4-206ENST00000428680 GOLGA6AQ9NYA3 693 aa7.95□□□□□ -1.14
CNOT4-206ENST00000428680 FBXL21Q9UKT6 434 aa7.95□□□□□ -1.14
CNOT4-206ENST00000428680 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.95□□□□□ -1.14
CNOT4-206ENST00000428680 F5H6K3 240 aa7.95□□□□□ -1.14
CNOT4-206ENST00000428680 BMP8BP34820 402 aa7.95□□□□□ -1.14
CNOT4-206ENST00000428680 CYP2J2P51589 502 aa7.95□□□□□ -1.14
CNOT4-206ENST00000428680 ARHGAP4P98171 946 aa7.95□□□□□ -1.14
CNOT4-206ENST00000428680 TFAMQ00059 246 aaKnown RBP7.95□□□□□ -1.14
CNOT4-206ENST00000428680 KLRC3Q07444 240 aa7.95□□□□□ -1.14
CNOT4-206ENST00000428680 ITKQ08881 620 aa7.95□□□□□ -1.14
CNOT4-206ENST00000428680 HLTFQ14527 1009 aaKnown RBP eCLIP7.95□□□□□ -1.14
CNOT4-206ENST00000428680 ARMCX2Q7L311 632 aa7.95□□□□□ -1.14
CNOT4-206ENST00000428680 GOLGA5Q8TBA6 731 aa7.95□□□□□ -1.14
CNOT4-206ENST00000428680 LMBR1Q8WVP7 490 aa7.95□□□□□ -1.14
CNOT4-206ENST00000428680 PRPF31Q8WWY3 499 aaKnown RBP7.95□□□□□ -1.14
CNOT4-206ENST00000428680 ZNF333Q96JL9 665 aa7.95□□□□□ -1.14
CNOT4-206ENST00000428680 NAA15Q9BXJ9 866 aaKnown RBP7.95□□□□□ -1.14
CNOT4-206ENST00000428680 LRRC4Q9HBW1 653 aa7.95□□□□□ -1.14
CNOT4-206ENST00000428680 FARP1Q9Y4F1 1045 aaPredicted RBP7.95□□□□□ -1.14
CNOT4-206ENST00000428680 PQBP1O60828 265 aaKnown RBP7.95□□□□□ -1.14
CNOT4-206ENST00000428680 XRCC5P13010 732 aaKnown RBP7.95□□□□□ -1.14
CNOT4-206ENST00000428680 TNFAIP3P21580 790 aa7.95□□□□□ -1.14
CNOT4-206ENST00000428680 HOXA13P31271 388 aaPredicted RBP7.95□□□□□ -1.14
CNOT4-206ENST00000428680 GRK4P32298 578 aa7.95□□□□□ -1.14
CNOT4-206ENST00000428680 CYLC1P35663 651 aaPredicted RBP7.95□□□□□ -1.14
CNOT4-206ENST00000428680 MAP3K10Q02779 954 aa7.95□□□□□ -1.14
CNOT4-206ENST00000428680 PPP2R5DQ14738 602 aa7.95□□□□□ -1.14
CNOT4-206ENST00000428680 SH3D19Q5HYK7 790 aa7.95□□□□□ -1.14
CNOT4-206ENST00000428680 DCAF4Q8WV16 495 aa7.95□□□□□ -1.14
CNOT4-206ENST00000428680 IQCGQ9H095 443 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms