RNA–Protein interactions for RNA: ENST00000428450.5

DDX39B-209, Transcript of DExD-box helicase 39B, humanhuman

TSL 4

Gene DDX39B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-209ENST00000428450 TAAR1Q96RJ0 339 aa13.54□□□□□ -0.24
DDX39B-209ENST00000428450 GPCPD1Q9NPB8 672 aa13.54□□□□□ -0.24
DDX39B-209ENST00000428450 COL20A1Q9P218 1284 aa13.54□□□□□ -0.24
DDX39B-209ENST00000428450 PNMA2Q9UL42 364 aa13.54□□□□□ -0.24
DDX39B-209ENST00000428450 TPRP12270 2363 aaKnown RBP13.53□□□□□ -0.24
DDX39B-209ENST00000428450 KMT2BQ9UMN6 2715 aaPredicted RBP13.53□□□□□ -0.24
DDX39B-209ENST00000428450 KDM4AO75164 1064 aa13.53□□□□□ -0.24
DDX39B-209ENST00000428450 PPFIA4O75335 1185 aa13.53□□□□□ -0.24
DDX39B-209ENST00000428450 STXBP2Q15833 593 aa13.53□□□□□ -0.24
DDX39B-209ENST00000428450 PTPN21Q16825 1174 aa13.53□□□□□ -0.24
DDX39B-209ENST00000428450 SYTL5Q8TDW5 730 aaPredicted RBP13.53□□□□□ -0.24
DDX39B-209ENST00000428450 NSUN6Q8TEA1 469 aaKnown RBP13.53□□□□□ -0.24
DDX39B-209ENST00000428450 SUSD6Q92537 303 aa13.53□□□□□ -0.24
DDX39B-209ENST00000428450 APBB2Q92870 758 aa13.53□□□□□ -0.24
DDX39B-209ENST00000428450 ATP6V0A1Q93050 837 aa13.53□□□□□ -0.24
DDX39B-209ENST00000428450 ZNF689Q96CS4 500 aaPredicted RBP13.53□□□□□ -0.24
DDX39B-209ENST00000428450 C16orf70Q9BSU1 422 aa13.53□□□□□ -0.24
DDX39B-209ENST00000428450 PLVAPQ9BX97 442 aa13.53□□□□□ -0.24
DDX39B-209ENST00000428450 NACAP1Q9BZK3 213 aa13.53□□□□□ -0.24
DDX39B-209ENST00000428450 BARX2Q9UMQ3 279 aaPredicted RBP13.53□□□□□ -0.24
DDX39B-209ENST00000428450 ADGRA3Q8IWK6 1321 aa13.53□□□□□ -0.24
DDX39B-209ENST00000428450 KIAA1217Q5T5P2 1943 aa13.52□□□□□ -0.24
DDX39B-209ENST00000428450 MED19A0JLT2 244 aaPredicted RBP13.52□□□□□ -0.25
DDX39B-209ENST00000428450 C17orf102A2RUQ5 167 aa13.52□□□□□ -0.25
DDX39B-209ENST00000428450 TREHO43280 583 aa13.52□□□□□ -0.25
DDX39B-209ENST00000428450 CAND2O75155 1236 aa13.52□□□□□ -0.25
DDX39B-209ENST00000428450 ZFYP08048 801 aaPredicted RBP13.52□□□□□ -0.25
DDX39B-209ENST00000428450 CTSHP09668 335 aa13.52□□□□□ -0.25
DDX39B-209ENST00000428450 ATF7P17544 494 aaPredicted RBP13.52□□□□□ -0.25
DDX39B-209ENST00000428450 CTDSPL2Q05D32 466 aa13.52□□□□□ -0.25
DDX39B-209ENST00000428450 HSDL1Q3SXM5 330 aa13.52□□□□□ -0.25
DDX39B-209ENST00000428450 MYSM1Q5VVJ2 828 aa13.52□□□□□ -0.25
DDX39B-209ENST00000428450 ADSSL1Q8N142 457 aa13.52□□□□□ -0.25
DDX39B-209ENST00000428450 SPPL3Q8TCT6 385 aa13.52□□□□□ -0.25
DDX39B-209ENST00000428450 P2RX5Q93086 422 aa13.52□□□□□ -0.25
DDX39B-209ENST00000428450 IWS1Q96ST2 819 aa13.52□□□□□ -0.25
DDX39B-209ENST00000428450 SEC62Q99442 399 aaKnown RBP13.52□□□□□ -0.25
DDX39B-209ENST00000428450 TMEM47Q9BQJ4 181 aa13.52□□□□□ -0.25
DDX39B-209ENST00000428450 NAPBQ9H115 298 aa13.52□□□□□ -0.25
DDX39B-209ENST00000428450 FRYLO94915 3013 aa13.52□□□□□ -0.25
DDX39B-209ENST00000428450 FOXP2O15409 715 aa13.51□□□□□ -0.25
DDX39B-209ENST00000428450 HMMRO75330 724 aa13.51□□□□□ -0.25
DDX39B-209ENST00000428450 EIF3JO75822 258 aaKnown RBP13.51□□□□□ -0.25
DDX39B-209ENST00000428450 KRT37O76014 449 aa13.51□□□□□ -0.25
DDX39B-209ENST00000428450 ITGB1P05556 798 aa13.51□□□□□ -0.25
DDX39B-209ENST00000428450 PDHBP11177 359 aa13.51□□□□□ -0.25
DDX39B-209ENST00000428450 NRIP1P48552 1158 aa13.51□□□□□ -0.25
DDX39B-209ENST00000428450 FRMD5Q7Z6J6 570 aa13.51□□□□□ -0.25
DDX39B-209ENST00000428450 TMEM105Q8N8V8 129 aa13.51□□□□□ -0.25
DDX39B-209ENST00000428450 PANK1Q8TE04 598 aa13.51□□□□□ -0.25
DDX39B-209ENST00000428450 NKD2Q969F2 451 aaPredicted RBP13.51□□□□□ -0.25
DDX39B-209ENST00000428450 PPP2R3CQ969Q6 453 aa13.51□□□□□ -0.25
DDX39B-209ENST00000428450 MAF1Q9H063 256 aa13.51□□□□□ -0.25
DDX39B-209ENST00000428450 RNPEPQ9H4A4 650 aa13.51□□□□□ -0.25
DDX39B-209ENST00000428450 MRVI1Q9Y6F6 885 aa13.51□□□□□ -0.25
DDX39B-209ENST00000428450 MYH7BA7E2Y1 1941 aa13.51□□□□□ -0.25
DDX39B-209ENST00000428450 RANBP6O60518 1105 aaKnown RBP13.5□□□□□ -0.25
DDX39B-209ENST00000428450 TOP1P11387 765 aaKnown RBP13.5□□□□□ -0.25
DDX39B-209ENST00000428450 ZNF543Q08ER8 600 aa13.5□□□□□ -0.25
DDX39B-209ENST00000428450 BTG3Q14201 252 aaPredicted RBP13.5□□□□□ -0.25
DDX39B-209ENST00000428450 USH1GQ495M9 461 aa13.5□□□□□ -0.25
DDX39B-209ENST00000428450 FAM26DQ5JW98 314 aa13.5□□□□□ -0.25
DDX39B-209ENST00000428450 RBM23Q86U06 439 aaKnown RBP13.5□□□□□ -0.25
DDX39B-209ENST00000428450 RMDN3Q96TC7 470 aa13.5□□□□□ -0.25
DDX39B-209ENST00000428450 ECHDC1Q9NTX5 307 aa13.5□□□□□ -0.25
DDX39B-209ENST00000428450 CACNA1GO43497 2377 aa13.5□□□□□ -0.25
DDX39B-209ENST00000428450 ENPP3O14638 875 aa13.49□□□□□ -0.25
DDX39B-209ENST00000428450 SMARCA5O60264 1052 aaPredicted RBP13.49□□□□□ -0.25
DDX39B-209ENST00000428450 DGKIO75912 1065 aa13.49□□□□□ -0.25
DDX39B-209ENST00000428450 NR3C2P08235 984 aa13.49□□□□□ -0.25
DDX39B-209ENST00000428450 FGRP09769 529 aa13.49□□□□□ -0.25
DDX39B-209ENST00000428450 SMIM10L2AP0DMW4 78 aa13.49□□□□□ -0.25
DDX39B-209ENST00000428450 SMIM10L2BP0DMW5 78 aa13.49□□□□□ -0.25
DDX39B-209ENST00000428450 SNHG28P0DPA3 235 aa13.49□□□□□ -0.25
DDX39B-209ENST00000428450 RBM10P98175 930 aaKnown RBP13.49□□□□□ -0.25
DDX39B-209ENST00000428450 NAALADL2Q58DX5 795 aa13.49□□□□□ -0.25
DDX39B-209ENST00000428450 CELF3Q5SZQ8 465 aaKnown RBP13.49□□□□□ -0.25
DDX39B-209ENST00000428450 ATP8B4Q8TF62 1192 aa13.49□□□□□ -0.25
DDX39B-209ENST00000428450 SPATA33Q96N06 139 aa13.49□□□□□ -0.25
DDX39B-209ENST00000428450 PCDHGC5Q9Y5F6 944 aa13.49□□□□□ -0.25
DDX39B-209ENST00000428450 MRPL42Q9Y6G3 142 aaKnown RBP13.49□□□□□ -0.25
DDX39B-209ENST00000428450 TTC3P53804 2025 aa13.49□□□□□ -0.25
DDX39B-209ENST00000428450 H3BRB1 525 aa13.48□□□□□ -0.25
DDX39B-209ENST00000428450 ORC4O43929 436 aa13.48□□□□□ -0.25
DDX39B-209ENST00000428450 SORBS3O60504 671 aa13.48□□□□□ -0.25
DDX39B-209ENST00000428450 CHRNA1P02708 482 aa13.48□□□□□ -0.25
DDX39B-209ENST00000428450 EIF2AK2P19525 551 aaKnown RBP13.48□□□□□ -0.25
DDX39B-209ENST00000428450 ADAM17P78536 824 aa13.48□□□□□ -0.25
DDX39B-209ENST00000428450 SP2Q02086 613 aa13.48□□□□□ -0.25
DDX39B-209ENST00000428450 ARHGEF16Q5VV41 709 aa13.48□□□□□ -0.25
DDX39B-209ENST00000428450 CRIPAKQ8N1N5 446 aa13.48□□□□□ -0.25
DDX39B-209ENST00000428450 KLHL23Q8NBE8 558 aa13.48□□□□□ -0.25
DDX39B-209ENST00000428450 VN1R2Q8NFZ6 395 aa13.48□□□□□ -0.25
DDX39B-209ENST00000428450 POF1BQ8WVV4 589 aa13.48□□□□□ -0.25
DDX39B-209ENST00000428450 RMDN1Q96DB5 314 aa13.48□□□□□ -0.25
DDX39B-209ENST00000428450 TUT1Q9H6E5 874 aaKnown RBP13.48□□□□□ -0.25
DDX39B-209ENST00000428450 EHMT1Q9H9B1 1298 aa13.48□□□□□ -0.25
DDX39B-209ENST00000428450 ANAPC4Q9UJX5 808 aa13.48□□□□□ -0.25
DDX39B-209ENST00000428450 GGPS1O95749 300 aa13.47□□□□□ -0.25
DDX39B-209ENST00000428450 TSHZ3Q63HK5 1081 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms