RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 FAM153CQ494X1 144 aa11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 H2AFVQ71UI9 128 aa11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 USP38Q8NB14 1042 aa11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 KIAA0895Q8NCT3 520 aa11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 DYNLL2Q96FJ2 89 aa11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 CEP63Q96MT8 703 aa11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 ISCUQ9H1K1 167 aa11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 FAM114A2Q9NRY5 505 aa11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 SEPT11Q9NVA2 429 aaKnown RBP11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 FAM153AQ9UHL3 310 aa11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 RASAL2Q9UJF2 1139 aa11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 ZNF233A6NK53 670 aa11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 PPP2R2AP63151 447 aa11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 ADAM9Q13443 819 aa11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 DAAM2Q86T65 1068 aa11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 P3H4Q92791 437 aa11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 CYFIP2Q96F07 1278 aa11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 UBA5Q9GZZ9 404 aa11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 CNOT10Q9H9A5 744 aaKnown RBP11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 CAMTA1Q9Y6Y1 1673 aa11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 ZSCAN5CA6NGD5 496 aaPredicted RBP11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 RAD21O60216 631 aa11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 RPS8P62241 208 aaKnown RBP11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 ACTN3Q08043 901 aaPredicted RBP11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 PPP2R5EQ16537 467 aa11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 C3orf20Q8ND61 904 aa11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 TRIM31Q9BZY9 425 aa11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 STMN4Q9H169 189 aaPredicted RBP11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 TAOK3Q9H2K8 898 aa11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 VCPKMTQ9H867 229 aa11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 BTG4Q9NY30 223 aa11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 SRRM3A6NNA2 597 aaPredicted RBP11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 LCA5LO95447 670 aa11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 CROCCP2Q86T23 111 aa11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 CCDC13Q8IYE1 715 aa11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 TMEM47Q9BQJ4 181 aa11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 ZMYND12Q9H0C1 365 aa11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 PLCB1Q9NQ66 1216 aa11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 GGA2Q9UJY4 613 aa11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 TNS2Q63HR2 1409 aa11.79□□□□□ -0.52
ATP2C1-204ENST00000428331 LAMB4A4D0S4 1761 aa11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 PRDX5P30044 214 aa11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 DHX9Q08211 1270 aaKnown RBP11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 WDR66Q8TBY9 1149 aa11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 RSRC1Q96IZ7 334 aaKnown RBP11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 ANKIB1Q9P2G1 1089 aa11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 ARMCX3Q9UH62 379 aaPredicted RBP11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 EPHB6O15197 1021 aa11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 HSPA9P38646 679 aaKnown RBP11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 CRKLP46109 303 aaKnown RBP11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 MAP2K1Q02750 393 aaPredicted RBP11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 TGFBRAP1Q8WUH2 860 aa11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 RAD54LQ92698 747 aa11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 EYA3Q99504 573 aa11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 AP1M1Q9BXS5 423 aa11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 DPH5Q9H2P9 285 aa11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 TMBIM4Q9HC24 238 aa11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 SAP30BPQ9UHR5 308 aaKnown RBP11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 AMFRQ9UKV5 643 aa11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 MINPP1Q9UNW1 487 aa11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 KCPQ6ZWJ8 1503 aa11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 KIF4AO95239 1232 aa11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 EIF3BP55884 814 aaKnown RBP11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 PTPROQ16827 1216 aa11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 ALKBH5Q6P6C2 394 aaKnown RBP11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 CCDC197Q8NCU1 140 aa11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 ANKS1AQ92625 1134 aa11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 BAIAP2L1Q9UHR4 511 aa11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 KDM3AQ9Y4C1 1321 aa11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 RASSF10A6NK89 507 aa11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 SART1O43290 800 aaKnown RBP11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 RPL13P26373 211 aaKnown RBP11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 MRPL12P52815 198 aaKnown RBP11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 CLNS1AP54105 237 aaKnown RBP11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 PPP1R7Q15435 360 aa11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 DCAF17Q5H9S7 520 aaPredicted RBP11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 SPZ1Q9BXG8 430 aa11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 PCDHA12Q9UN75 941 aa11.78□□□□□ -0.52
ATP2C1-204ENST00000428331 COBLL1Q53SF7 1204 aa11.77□□□□□ -0.52
ATP2C1-204ENST00000428331 C12orf60Q5U649 245 aa11.77□□□□□ -0.52
ATP2C1-204ENST00000428331 C1orf131Q8NDD1 294 aaKnown RBP11.77□□□□□ -0.52
ATP2C1-204ENST00000428331 SLC40A1Q9NP59 571 aa11.77□□□□□ -0.52
ATP2C1-204ENST00000428331 MTRF1LQ9UGC7 380 aaKnown RBP11.77□□□□□ -0.52
ATP2C1-204ENST00000428331 ZNF804BA4D1E1 1349 aa11.77□□□□□ -0.53
ATP2C1-204ENST00000428331 HSD17B3P37058 310 aa11.77□□□□□ -0.53
ATP2C1-204ENST00000428331 MEI1Q5TIA1 1274 aa11.77□□□□□ -0.53
ATP2C1-204ENST00000428331 RCSD1Q6JBY9 416 aa11.77□□□□□ -0.53
ATP2C1-204ENST00000428331 PARP9Q8IXQ6 854 aa11.77□□□□□ -0.53
ATP2C1-204ENST00000428331 EIF1ADQ8N9N8 165 aaKnown RBP11.77□□□□□ -0.53
ATP2C1-204ENST00000428331 CALR3Q96L12 384 aaKnown RBP11.77□□□□□ -0.53
ATP2C1-204ENST00000428331 NAP1L4Q99733 375 aaKnown RBP11.77□□□□□ -0.53
ATP2C1-204ENST00000428331 FBXL5Q9UKA1 691 aa11.77□□□□□ -0.53
ATP2C1-204ENST00000428331 KIF1CO43896 1103 aaKnown RBP11.77□□□□□ -0.53
ATP2C1-204ENST00000428331 CTNND1O60716 968 aaKnown RBP11.77□□□□□ -0.53
ATP2C1-204ENST00000428331 VIMP08670 466 aaKnown RBP11.77□□□□□ -0.53
ATP2C1-204ENST00000428331 MAGOHP61326 146 aaKnown RBP11.77□□□□□ -0.53
ATP2C1-204ENST00000428331 EXOC3L4Q17RC7 722 aa11.77□□□□□ -0.53
ATP2C1-204ENST00000428331 AGBL2Q5U5Z8 902 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms