RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 PCDHA8Q9Y5H6 950 aa10.6□□□□□ -0.71
SNX13-203ENST00000428135 PCP11498 1178 aaKnown RBP10.6□□□□□ -0.71
SNX13-203ENST00000428135 PSMC2P35998 433 aaKnown RBP10.6□□□□□ -0.71
SNX13-203ENST00000428135 BFSP1Q12934 665 aa10.6□□□□□ -0.71
SNX13-203ENST00000428135 CEP85LQ5SZL2 805 aa10.6□□□□□ -0.71
SNX13-203ENST00000428135 DSTYKQ6XUX3 929 aa10.6□□□□□ -0.71
SNX13-203ENST00000428135 IMPACTQ9P2X3 320 aa10.6□□□□□ -0.71
SNX13-203ENST00000428135 QRICH2Q9H0J4 1663 aa10.6□□□□□ -0.71
SNX13-203ENST00000428135 DIP2AQ14689 1571 aa10.6□□□□□ -0.71
SNX13-203ENST00000428135 KRT71Q3SY84 523 aa10.6□□□□□ -0.71
SNX13-203ENST00000428135 C9orf131Q5VYM1 1079 aa10.6□□□□□ -0.71
SNX13-203ENST00000428135 DENND2CQ68D51 928 aa10.6□□□□□ -0.71
SNX13-203ENST00000428135 CATSPER4Q7RTX7 472 aa10.6□□□□□ -0.71
SNX13-203ENST00000428135 WDR11Q9BZH6 1224 aa10.6□□□□□ -0.71
SNX13-203ENST00000428135 SLC38A10Q9HBR0 1119 aa10.6□□□□□ -0.71
SNX13-203ENST00000428135 SAR1BQ9Y6B6 198 aa10.6□□□□□ -0.71
SNX13-203ENST00000428135 H0YCG3 227 aa10.6□□□□□ -0.71
SNX13-203ENST00000428135 SGK1O00141 431 aa10.6□□□□□ -0.71
SNX13-203ENST00000428135 XPAP23025 273 aaPredicted RBP10.6□□□□□ -0.71
SNX13-203ENST00000428135 MTMR1Q13613 665 aa10.6□□□□□ -0.71
SNX13-203ENST00000428135 FYB2Q5VWT5 728 aa10.6□□□□□ -0.71
SNX13-203ENST00000428135 SPATA1Q5VX52 437 aa10.6□□□□□ -0.71
SNX13-203ENST00000428135 ILDR1Q86SU0 546 aaPredicted RBP10.6□□□□□ -0.71
SNX13-203ENST00000428135 FOXP4Q8IVH2 680 aaPredicted RBP10.6□□□□□ -0.71
SNX13-203ENST00000428135 TMEM47Q9BQJ4 181 aa10.6□□□□□ -0.71
SNX13-203ENST00000428135 IVLP07476 585 aa10.59□□□□□ -0.71
SNX13-203ENST00000428135 ZNF853P0CG23 659 aa10.59□□□□□ -0.71
SNX13-203ENST00000428135 ATP5DP30049 168 aa10.59□□□□□ -0.71
SNX13-203ENST00000428135 SKIV2LQ15477 1246 aaKnown RBP10.59□□□□□ -0.71
SNX13-203ENST00000428135 AFAP1L1Q8TED9 768 aa10.59□□□□□ -0.71
SNX13-203ENST00000428135 SH2D3AQ9BRG2 576 aa10.59□□□□□ -0.71
SNX13-203ENST00000428135 N4BP1O75113 896 aaKnown RBP10.59□□□□□ -0.71
SNX13-203ENST00000428135 CAPN15O75808 1086 aa10.59□□□□□ -0.71
SNX13-203ENST00000428135 ZNF18P17022 549 aa10.59□□□□□ -0.71
SNX13-203ENST00000428135 STAT3P40763 770 aa10.59□□□□□ -0.71
SNX13-203ENST00000428135 MFAP3P55082 362 aa10.59□□□□□ -0.71
SNX13-203ENST00000428135 MCUQ8NE86 351 aa10.59□□□□□ -0.71
SNX13-203ENST00000428135 MAN1B1Q9UKM7 699 aa10.59□□□□□ -0.71
SNX13-203ENST00000428135 PNMA3Q9UL41 463 aa10.59□□□□□ -0.71
SNX13-203ENST00000428135 RNF123Q5XPI4 1314 aa10.59□□□□□ -0.71
SNX13-203ENST00000428135 SCARF1Q14162 830 aa10.59□□□□□ -0.71
SNX13-203ENST00000428135 SLC39A14Q15043 492 aa10.59□□□□□ -0.71
SNX13-203ENST00000428135 OR6B2Q6IFH4 312 aa10.59□□□□□ -0.71
SNX13-203ENST00000428135 C11orf57Q6ZUT1 292 aaPredicted RBP10.59□□□□□ -0.71
SNX13-203ENST00000428135 GCNT4Q9P109 453 aa10.59□□□□□ -0.71
SNX13-203ENST00000428135 RGS12O14924 1447 aa10.59□□□□□ -0.71
SNX13-203ENST00000428135 MYLK4Q86YV6 388 aaPredicted RBP10.59□□□□□ -0.71
SNX13-203ENST00000428135 ARHGEF2Q92974 986 aaKnown RBP10.59□□□□□ -0.71
SNX13-203ENST00000428135 HAUS1Q96CS2 278 aa10.59□□□□□ -0.71
SNX13-203ENST00000428135 MSTO1Q9BUK6 570 aa10.59□□□□□ -0.71
SNX13-203ENST00000428135 PNPLA6Q8IY17 1366 aa10.59□□□□□ -0.71
SNX13-203ENST00000428135 IQCA1LA6NCM1 817 aa10.59□□□□□ -0.71
SNX13-203ENST00000428135 ZMYND10O75800 440 aa10.59□□□□□ -0.71
SNX13-203ENST00000428135 HMGCS2P54868 508 aa10.59□□□□□ -0.71
SNX13-203ENST00000428135 ANGEL2Q5VTE6 544 aaKnown RBP10.59□□□□□ -0.71
SNX13-203ENST00000428135 GANCQ8TET4 914 aa10.59□□□□□ -0.71
SNX13-203ENST00000428135 ERO1AQ96HE7 468 aa10.59□□□□□ -0.71
SNX13-203ENST00000428135 SAMSN1Q9NSI8 373 aaKnown RBP10.59□□□□□ -0.71
SNX13-203ENST00000428135 K7ERI5 159 aa10.58□□□□□ -0.72
SNX13-203ENST00000428135 PLCB4Q15147 1175 aa10.58□□□□□ -0.72
SNX13-203ENST00000428135 TRIP13Q15645 432 aaPredicted RBP10.58□□□□□ -0.72
SNX13-203ENST00000428135 CYFIP1Q7L576 1253 aa10.58□□□□□ -0.72
SNX13-203ENST00000428135 ARFGAP2Q8N6H7 521 aa10.58□□□□□ -0.72
SNX13-203ENST00000428135 HACL1Q9UJ83 578 aa10.58□□□□□ -0.72
SNX13-203ENST00000428135 CHGBP05060 677 aa10.58□□□□□ -0.72
SNX13-203ENST00000428135 H2AFZP0C0S5 128 aa10.58□□□□□ -0.72
SNX13-203ENST00000428135 RBL2Q08999 1139 aa10.58□□□□□ -0.72
SNX13-203ENST00000428135 H2AFVQ71UI9 128 aa10.58□□□□□ -0.72
SNX13-203ENST00000428135 FAM160B2Q86V87 743 aa10.58□□□□□ -0.72
SNX13-203ENST00000428135 OR6B3Q8NGW1 331 aa10.58□□□□□ -0.72
SNX13-203ENST00000428135 CALN1Q9BXU9 219 aa10.58□□□□□ -0.72
SNX13-203ENST00000428135 RPF1Q9H9Y2 349 aaKnown RBP10.58□□□□□ -0.72
SNX13-203ENST00000428135 PARVGQ9HBI0 331 aa10.58□□□□□ -0.72
SNX13-203ENST00000428135 EMILIN3Q9NT22 766 aa10.58□□□□□ -0.72
SNX13-203ENST00000428135 AFPP02771 609 aaKnown RBP10.58□□□□□ -0.72
SNX13-203ENST00000428135 FOXD4Q12950 439 aaPredicted RBP10.58□□□□□ -0.72
SNX13-203ENST00000428135 OXER1Q8TDS5 423 aa10.58□□□□□ -0.72
SNX13-203ENST00000428135 P2RX5Q93086 422 aa10.58□□□□□ -0.72
SNX13-203ENST00000428135 METTL14Q9HCE5 456 aaKnown RBP10.58□□□□□ -0.72
SNX13-203ENST00000428135 PPP2R2CQ9Y2T4 447 aa10.58□□□□□ -0.72
SNX13-203ENST00000428135 F5H423 210 aaPredicted RBP10.58□□□□□ -0.72
SNX13-203ENST00000428135 CELF2O95319 508 aaKnown RBP10.58□□□□□ -0.72
SNX13-203ENST00000428135 TTC19Q6DKK2 380 aaPredicted RBP10.58□□□□□ -0.72
SNX13-203ENST00000428135 TWF2Q6IBS0 349 aaKnown RBP10.58□□□□□ -0.72
SNX13-203ENST00000428135 RHPN2Q8IUC4 686 aa10.58□□□□□ -0.72
SNX13-203ENST00000428135 PASD1Q8IV76 773 aa10.58□□□□□ -0.72
SNX13-203ENST00000428135 GABPB2Q8TAK5 448 aaPredicted RBP10.58□□□□□ -0.72
SNX13-203ENST00000428135 NUCKS1Q9H1E3 243 aaKnown RBP10.58□□□□□ -0.72
SNX13-203ENST00000428135 RNF146Q9NTX7 359 aa10.58□□□□□ -0.72
SNX13-203ENST00000428135 ESYT2A0FGR8 921 aa10.58□□□□□ -0.72
SNX13-203ENST00000428135 TUBB4AP04350 444 aa10.58□□□□□ -0.72
SNX13-203ENST00000428135 GSTA1P08263 222 aa10.58□□□□□ -0.72
SNX13-203ENST00000428135 GSTA2P09210 222 aa10.58□□□□□ -0.72
SNX13-203ENST00000428135 ELF1P32519 619 aa10.58□□□□□ -0.72
SNX13-203ENST00000428135 LRRC4Q9HBW1 653 aa10.58□□□□□ -0.72
SNX13-203ENST00000428135 HAUS2Q9NVX0 235 aa10.58□□□□□ -0.72
SNX13-203ENST00000428135 GGA3Q9NZ52 723 aa10.58□□□□□ -0.72
SNX13-203ENST00000428135 TACC3Q9Y6A5 838 aa10.58□□□□□ -0.72
SNX13-203ENST00000428135 POC1B-GALNT4F8VUJ3 575 aa10.57□□□□□ -0.72
SNX13-203ENST00000428135 NDUFAB1O14561 156 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms