RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 MRPS9P82933 396 aaKnown RBP10.59□□□□□ -0.71
RFX3-AS1-202ENST00000427722 LRIT3Q3SXY7 679 aa10.59□□□□□ -0.71
RFX3-AS1-202ENST00000427722 TYW1BQ6NUM6 668 aa10.59□□□□□ -0.71
RFX3-AS1-202ENST00000427722 PPP1R18Q6NYC8 613 aa10.59□□□□□ -0.71
RFX3-AS1-202ENST00000427722 DHX37Q8IY37 1157 aaKnown RBP10.59□□□□□ -0.71
RFX3-AS1-202ENST00000427722 SPATA33Q96N06 139 aa10.59□□□□□ -0.71
RFX3-AS1-202ENST00000427722 USP26Q9BXU7 913 aa10.59□□□□□ -0.71
RFX3-AS1-202ENST00000427722 UPF3BQ9BZI7 483 aaKnown RBP10.59□□□□□ -0.71
RFX3-AS1-202ENST00000427722 HIPK3Q9H422 1215 aa10.59□□□□□ -0.71
RFX3-AS1-202ENST00000427722 RTEL1Q9NZ71 1219 aa10.59□□□□□ -0.71
RFX3-AS1-202ENST00000427722 V9GY48 417 aaPredicted RBP10.59□□□□□ -0.71
RFX3-AS1-202ENST00000427722 UMODL1Q5DID0 1318 aa10.58□□□□□ -0.71
RFX3-AS1-202ENST00000427722 NID2Q14112 1375 aa10.58□□□□□ -0.72
RFX3-AS1-202ENST00000427722 CCDC196A0A1B0GTZ2 297 aa10.58□□□□□ -0.72
RFX3-AS1-202ENST00000427722 SPDYE3A6NKU9 549 aa10.58□□□□□ -0.72
RFX3-AS1-202ENST00000427722 STXBP3O00186 592 aa10.58□□□□□ -0.72
RFX3-AS1-202ENST00000427722 FIBPO43427 364 aa10.58□□□□□ -0.72
RFX3-AS1-202ENST00000427722 PPFIA3O75145 1194 aa10.58□□□□□ -0.72
RFX3-AS1-202ENST00000427722 CD4P01730 458 aa10.58□□□□□ -0.72
RFX3-AS1-202ENST00000427722 CYP2C9P11712 490 aa10.58□□□□□ -0.72
RFX3-AS1-202ENST00000427722 CYP2C18P33260 490 aa10.58□□□□□ -0.72
RFX3-AS1-202ENST00000427722 ADD1P35611 737 aaKnown RBP10.58□□□□□ -0.72
RFX3-AS1-202ENST00000427722 ADCY7P51828 1080 aa10.58□□□□□ -0.72
RFX3-AS1-202ENST00000427722 LAMC2Q13753 1193 aa10.58□□□□□ -0.72
RFX3-AS1-202ENST00000427722 SHHQ15465 462 aa10.58□□□□□ -0.72
RFX3-AS1-202ENST00000427722 DGKDQ16760 1214 aa10.58□□□□□ -0.72
RFX3-AS1-202ENST00000427722 NBPF20Q3BBV1 942 aa10.58□□□□□ -0.72
RFX3-AS1-202ENST00000427722 CELF3Q5SZQ8 465 aaKnown RBP10.58□□□□□ -0.72
RFX3-AS1-202ENST00000427722 PCNX4Q63HM2 1172 aa10.58□□□□□ -0.72
RFX3-AS1-202ENST00000427722 KCNV1Q6PIU1 500 aa10.58□□□□□ -0.72
RFX3-AS1-202ENST00000427722 RUFY3Q7L099 469 aa10.58□□□□□ -0.72
RFX3-AS1-202ENST00000427722 PPTC7Q8NI37 304 aa10.58□□□□□ -0.72
RFX3-AS1-202ENST00000427722 EMID1Q96A84 441 aaPredicted RBP10.58□□□□□ -0.72
RFX3-AS1-202ENST00000427722 RNPC3Q96LT9 517 aaKnown RBP10.58□□□□□ -0.72
RFX3-AS1-202ENST00000427722 INPP4AQ96PE3 977 aaPredicted RBP10.58□□□□□ -0.72
RFX3-AS1-202ENST00000427722 SEZ6LQ9BYH1 1024 aa10.58□□□□□ -0.72
RFX3-AS1-202ENST00000427722 VPS9D1Q9Y2B5 631 aa10.58□□□□□ -0.72
RFX3-AS1-202ENST00000427722 CYP46A1Q9Y6A2 500 aa10.58□□□□□ -0.72
RFX3-AS1-202ENST00000427722 NOP56O00567 594 aaKnown RBP10.57□□□□□ -0.72
RFX3-AS1-202ENST00000427722 STAM2O75886 525 aa10.57□□□□□ -0.72
RFX3-AS1-202ENST00000427722 CSF2RAP15509 400 aa10.57□□□□□ -0.72
RFX3-AS1-202ENST00000427722 SP2Q02086 613 aa10.57□□□□□ -0.72
RFX3-AS1-202ENST00000427722 SP4Q02446 784 aa10.57□□□□□ -0.72
RFX3-AS1-202ENST00000427722 SEMA3FQ13275 785 aa10.57□□□□□ -0.72
RFX3-AS1-202ENST00000427722 PPIGQ13427 754 aaKnown RBP eCLIP10.57□□□□□ -0.72
RFX3-AS1-202ENST00000427722 MYSM1Q5VVJ2 828 aa10.57□□□□□ -0.72
RFX3-AS1-202ENST00000427722 MFSD5Q6N075 450 aa10.57□□□□□ -0.72
RFX3-AS1-202ENST00000427722 NFRKBQ6P4R8 1299 aa10.57□□□□□ -0.72
RFX3-AS1-202ENST00000427722 KAT2BQ92831 832 aa10.57□□□□□ -0.72
RFX3-AS1-202ENST00000427722 PGBD1Q96JS3 809 aa10.57□□□□□ -0.72
RFX3-AS1-202ENST00000427722 NOC4LQ9BVI4 516 aaKnown RBP10.57□□□□□ -0.72
RFX3-AS1-202ENST00000427722 SLC4A5Q9BY07 1137 aa10.57□□□□□ -0.72
RFX3-AS1-202ENST00000427722 AGXT2Q9BYV1 514 aa10.57□□□□□ -0.72
RFX3-AS1-202ENST00000427722 MLXIPQ9HAP2 919 aa10.57□□□□□ -0.72
RFX3-AS1-202ENST00000427722 NCOA5Q9HCD5 579 aaKnown RBP10.57□□□□□ -0.72
RFX3-AS1-202ENST00000427722 BARHL2Q9NY43 387 aa10.57□□□□□ -0.72
RFX3-AS1-202ENST00000427722 PCDHA6Q9UN73 950 aa10.57□□□□□ -0.72
RFX3-AS1-202ENST00000427722 NOD1Q9Y239 953 aa10.57□□□□□ -0.72
RFX3-AS1-202ENST00000427722 PCDHA8Q9Y5H6 950 aa10.57□□□□□ -0.72
RFX3-AS1-202ENST00000427722 LAMA3Q16787 3333 aa10.57□□□□□ -0.72
RFX3-AS1-202ENST00000427722 LTBP2Q14767 1821 aa10.56□□□□□ -0.72
RFX3-AS1-202ENST00000427722 DNAH12Q6ZR08 3092 aa10.56□□□□□ -0.72
RFX3-AS1-202ENST00000427722 SPATA31C2B4DYI2 1134 aa10.56□□□□□ -0.72
RFX3-AS1-202ENST00000427722 hCG_1984214I3L0E3 225 aa10.56□□□□□ -0.72
RFX3-AS1-202ENST00000427722 F2P00734 622 aa10.56□□□□□ -0.72
RFX3-AS1-202ENST00000427722 SUPT20HL2P0C7V6 817 aa10.56□□□□□ -0.72
RFX3-AS1-202ENST00000427722 ACRP10323 421 aa10.56□□□□□ -0.72
RFX3-AS1-202ENST00000427722 TGFB3P10600 412 aa10.56□□□□□ -0.72
RFX3-AS1-202ENST00000427722 HOXD8P13378 290 aaPredicted RBP10.56□□□□□ -0.72
RFX3-AS1-202ENST00000427722 SCG2P13521 617 aa10.56□□□□□ -0.72
RFX3-AS1-202ENST00000427722 ICAM3P32942 547 aa10.56□□□□□ -0.72
RFX3-AS1-202ENST00000427722 CCL23P55773 120 aa10.56□□□□□ -0.72
RFX3-AS1-202ENST00000427722 CCT2P78371 535 aaKnown RBP10.56□□□□□ -0.72
RFX3-AS1-202ENST00000427722 AKAP17AQ02040 695 aaKnown RBP10.56□□□□□ -0.72
RFX3-AS1-202ENST00000427722 TOB2Q14106 344 aaPredicted RBP10.56□□□□□ -0.72
RFX3-AS1-202ENST00000427722 PFKFB3Q16875 520 aaPredicted RBP10.56□□□□□ -0.72
RFX3-AS1-202ENST00000427722 HSDL1Q3SXM5 330 aa10.56□□□□□ -0.72
RFX3-AS1-202ENST00000427722 XRRA1Q6P2D8 792 aa10.56□□□□□ -0.72
RFX3-AS1-202ENST00000427722 METTL7BQ6UX53 244 aa10.56□□□□□ -0.72
RFX3-AS1-202ENST00000427722 NLRX1Q86UT6 975 aa10.56□□□□□ -0.72
RFX3-AS1-202ENST00000427722 FBXL16Q8N461 479 aa10.56□□□□□ -0.72
RFX3-AS1-202ENST00000427722 TMEM199Q8N511 208 aa10.56□□□□□ -0.72
RFX3-AS1-202ENST00000427722 ZNF713Q8N859 430 aaPredicted RBP10.56□□□□□ -0.72
RFX3-AS1-202ENST00000427722 PHKBQ93100 1093 aa10.56□□□□□ -0.72
RFX3-AS1-202ENST00000427722 ALG1Q9BT22 464 aa10.56□□□□□ -0.72
RFX3-AS1-202ENST00000427722 KATNAL1Q9BW62 490 aa10.56□□□□□ -0.72
RFX3-AS1-202ENST00000427722 SLC26A6Q9BXS9 759 aa10.56□□□□□ -0.72
RFX3-AS1-202ENST00000427722 ANO3Q9BYT9 981 aa10.56□□□□□ -0.72
RFX3-AS1-202ENST00000427722 TM6SF1Q9BZW5 370 aa10.56□□□□□ -0.72
RFX3-AS1-202ENST00000427722 WNT8AQ9H1J5 351 aa10.56□□□□□ -0.72
RFX3-AS1-202ENST00000427722 EHMT1Q9H9B1 1298 aa10.56□□□□□ -0.72
RFX3-AS1-202ENST00000427722 RIC8AQ9NPQ8 531 aa10.56□□□□□ -0.72
RFX3-AS1-202ENST00000427722 TSHZ2Q9NRE2 1034 aa10.56□□□□□ -0.72
RFX3-AS1-202ENST00000427722 TMEM260Q9NX78 707 aa10.56□□□□□ -0.72
RFX3-AS1-202ENST00000427722 PKD2L1Q9P0L9 805 aa10.56□□□□□ -0.72
RFX3-AS1-202ENST00000427722 BAZ2BQ9UIF8 2168 aaKnown RBP10.55□□□□□ -0.72
RFX3-AS1-202ENST00000427722 SMCO2A6NFE2 343 aa10.55□□□□□ -0.72
RFX3-AS1-202ENST00000427722 ITGB5P18084 799 aa10.55□□□□□ -0.72
RFX3-AS1-202ENST00000427722 PDIA3P30101 505 aaKnown RBP10.55□□□□□ -0.72
RFX3-AS1-202ENST00000427722 MTMR1Q13613 665 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms