RNA–Protein interactions for RNA: ENST00000426509.1

LINC00407-201, long intergenic non-protein coding RNA 407, humanhuman

TSL 5 BASIC

Gene LINC00407, Length 295 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00407-201ENST00000426509 DDX60LQ5H9U9 1706 aaKnown RBP3.12□□□□□ -1.91
LINC00407-201ENST00000426509 PITPNM2Q9BZ72 1349 aa3.12□□□□□ -1.91
LINC00407-201ENST00000426509 ZNF541Q9H0D2 1346 aa3.12□□□□□ -1.91
LINC00407-201ENST00000426509 TAF1LQ8IZX4 1826 aa3.12□□□□□ -1.91
LINC00407-201ENST00000426509 THSD7BQ9C0I4 1608 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 BRCA1P38398 1863 aaKnown RBP3.11□□□□□ -1.91
LINC00407-201ENST00000426509 MYH2Q9UKX2 1941 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 MYH13Q9UKX3 1938 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 CCDC196A0A1B0GTZ2 297 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 KRBA1A5PL33 1030 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 PHF20L1A8MW92 1017 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 TMEM232C9JQI7 657 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 H3BRB1 525 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 MYO1BO43795 1136 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 NMT2O60551 498 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 SIN3BO75182 1162 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 PRDM1O75626 825 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 DDAH1O94760 285 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 SMC2O95347 1197 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 ABL1P00519 1130 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 PCP11498 1178 aaKnown RBP3.11□□□□□ -1.91
LINC00407-201ENST00000426509 ZNF18P17022 549 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 ADH6P28332 368 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 PRDX5P30044 214 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 HIBADHP31937 336 aaKnown RBP3.11□□□□□ -1.91
LINC00407-201ENST00000426509 KRT2P35908 639 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 KCNJ6P48051 423 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 DGKGP49619 791 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 GSDMDP57764 484 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 MYL5Q02045 173 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 NCBP1Q09161 790 aaKnown RBP3.11□□□□□ -1.91
LINC00407-201ENST00000426509 KCNA1Q09470 495 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 SPEM2Q0P670 501 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 TBX2Q13207 712 aaPredicted RBP3.11□□□□□ -1.91
LINC00407-201ENST00000426509 GNL2Q13823 731 aaKnown RBP3.11□□□□□ -1.91
LINC00407-201ENST00000426509 TRIM29Q14134 588 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 MORC3Q14149 939 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 POSTNQ15063 836 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 PPP2R5BQ15173 497 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 SAFBQ15424 915 aaKnown RBP eCLIP3.11□□□□□ -1.91
LINC00407-201ENST00000426509 SYCP1Q15431 976 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 GRIK5Q16478 980 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 SBK1Q52WX2 424 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 RILPL1Q5EBL4 403 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 TRAPPC3LQ5T215 181 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 ISM2Q6H9L7 571 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 RCSD1Q6JBY9 416 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 GPAT2Q6NUI2 795 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 C16orf46Q6P387 395 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 USP49Q70CQ1 688 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 CHSY3Q70JA7 882 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 APTXQ7Z2E3 356 aaKnown RBP3.11□□□□□ -1.91
LINC00407-201ENST00000426509 BTLAQ7Z6A9 289 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 FILIP1Q7Z7B0 1213 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 SYT9Q86SS6 491 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 TXNRD3Q86VQ6 643 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 TMEM139Q8IV31 216 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 VSTM4Q8IW00 320 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 GRAMD1CQ8IYS0 662 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 SRBD1Q8N5C6 995 aaKnown RBP3.11□□□□□ -1.91
LINC00407-201ENST00000426509 CNNM3Q8NE01 707 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 GTF3C2Q8WUA4 911 aaPredicted RBP3.11□□□□□ -1.91
LINC00407-201ENST00000426509 ANKS1AQ92625 1134 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 COL26A1Q96A83 441 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 MYO19Q96H55 970 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 CEP63Q96MT8 703 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 UBAC1Q9BSL1 405 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 NYXQ9GZU5 481 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 ANKRD2Q9GZV1 360 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 CSRNP2Q9H175 543 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 TUT1Q9H6E5 874 aaKnown RBP3.11□□□□□ -1.91
LINC00407-201ENST00000426509 CABP5Q9NP86 173 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 BRD7Q9NPI1 651 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 TOMM22Q9NS69 142 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 RBM28Q9NW13 759 aaKnown RBP3.11□□□□□ -1.91
LINC00407-201ENST00000426509 AATFQ9NY61 560 aaKnown RBP eCLIP3.11□□□□□ -1.91
LINC00407-201ENST00000426509 VPS54Q9P1Q0 977 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 ANKIB1Q9P2G1 1089 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 IMPACTQ9P2X3 320 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 ABCF2Q9UG63 623 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 RAPGEFL1Q9UHV5 662 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 PRR12Q9ULL5 1215 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 KCNH4Q9UQ05 1017 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 GNEQ9Y223 722 aaKnown RBP3.11□□□□□ -1.91
LINC00407-201ENST00000426509 SRPRBQ9Y5M8 271 aaKnown RBP3.11□□□□□ -1.91
LINC00407-201ENST00000426509 KAT6BQ8WYB5 2073 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 FAM205AQ6ZU69 1335 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 UBR3Q6ZT12 1888 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 NAV1Q8NEY1 1877 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 MYH6P13533 1939 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 ROBO3Q96MS0 1386 aa3.11□□□□□ -1.91
LINC00407-201ENST00000426509 SNED1Q8TER0 1413 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 LRRC37AA6NMS7 1700 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 hCG_1642624A0A1W2PR95 340 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 ERICH2A1L162 156 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 TRIM75PA6NK02 468 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 ADARB2-AS1A8MUL3 147 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 OPLAHO14841 1288 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 FANCGO15287 622 aa3.1□□□□□ -1.91
LINC00407-201ENST00000426509 POLR2DO15514 142 aaKnown RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms