RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 GUCY1A3Q02108 690 aa8.29□□□□□ -1.08
SMARCC1-202ENST00000425518 C16orf86Q6ZW13 317 aa8.29□□□□□ -1.08
SMARCC1-202ENST00000425518 SH3GL2Q99962 352 aa8.29□□□□□ -1.08
SMARCC1-202ENST00000425518 RTFDC1Q9BY42 306 aaPredicted RBP8.29□□□□□ -1.08
SMARCC1-202ENST00000425518 LRRC27Q9C0I9 530 aa8.29□□□□□ -1.08
SMARCC1-202ENST00000425518 CEP72Q9P209 647 aa8.29□□□□□ -1.08
SMARCC1-202ENST00000425518 NARFQ9UHQ1 456 aa8.29□□□□□ -1.08
SMARCC1-202ENST00000425518 F8W031 263 aaPredicted RBP8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 EDIL3O43854 480 aa8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 TOM1O60784 492 aa8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 PDHBP11177 359 aa8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 ACTN1P12814 892 aa8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 INPP5BP32019 993 aa8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 HPDP32754 393 aaPredicted RBP8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 ADAM9Q13443 819 aa8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 COBLL1Q53SF7 1204 aa8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 TTBK2Q6IQ55 1244 aa8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 ZNF572Q7Z3I7 529 aaPredicted RBP8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 CASKIN2Q8WXE0 1202 aa8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 TSKSQ9UJT2 592 aa8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 ATP6V0A2Q9Y487 856 aa8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 CEP104O60308 925 aa8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 PSMD2Q13200 908 aa8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 PDIA5Q14554 519 aa8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 NAB2Q15742 525 aa8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 ASIC2Q16515 512 aa8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 FAM98CQ17RN3 349 aaKnown RBP8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 ICE2Q659A1 982 aa8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 CAVIN3Q969G5 261 aa8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 DNAJC19Q96DA6 116 aa8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 RNPC3Q96LT9 517 aaKnown RBP8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 BCCIPQ9P287 314 aaKnown RBP eCLIP8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 GRIN2DO15399 1336 aa8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 MYH14Q7Z406 1995 aaKnown RBP8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 ZNF233A6NK53 670 aa8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 TMCO5BA8MYB1 307 aa8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 UFL1O94874 794 aa8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 RPS6KA1Q15418 735 aa8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 GLE1Q53GS7 698 aaKnown RBP8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 MFSD14BQ5SR56 506 aa8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 CEP85LQ5SZL2 805 aa8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 FBXW10Q5XX13 1052 aa8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 DPP8Q6V1X1 898 aaPredicted RBP8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 GPBP1Q86WP2 473 aa8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 SPAG5Q96R06 1193 aa8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 RIOX1Q9H6W3 641 aa8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 LEMD3Q9Y2U8 911 aa8.28□□□□□ -1.08
SMARCC1-202ENST00000425518 H0YHG0 523 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 MPHOSPH10O00566 681 aaKnown RBP8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 RAD51CO43502 376 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 SEC24CP53992 1094 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 SLC18A3Q16572 532 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 CCDC65Q8IXS2 484 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 AP1M1Q9BXS5 423 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 EDEM3Q9BZQ6 932 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 CD209Q9NNX6 404 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 POTEB3A0JP26 581 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 POTECB2RU33 542 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 KIAA0754O94854 1291 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 PLA2G4BP0C869 781 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 AKR1B1P15121 316 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 FAM182BQ5T319 152 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 RNF187Q5TA31 235 aaPredicted RBP8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 TCERG1LQ5VWI1 586 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 POTEBQ6S5H4 581 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 KCTD1Q719H9 257 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 DDX42Q86XP3 938 aaKnown RBP eCLIP8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 IQCKQ8N0W5 287 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 PROM2Q8N271 834 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 OTUD6BQ8N6M0 293 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 HAS1Q92839 578 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 NUCKS1Q9H1E3 243 aaKnown RBP8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 GDF3Q9NR23 364 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 EMILIN3Q9NT22 766 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 RNF14Q9UBS8 474 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 ABCB11O95342 1321 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 ESYT2A0FGR8 921 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 USP17L15C9J2P7 530 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 USP17L13C9JLJ4 530 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 USP17L11C9JVI0 530 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 USP17L18D6R9N7 530 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 USP17L22D6RA61 530 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 USP17L17D6RBQ6 530 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 USP17L19D6RCP7 530 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 USP17L20D6RJB6 530 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 CETN3O15182 167 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 EPB41P11171 864 aaKnown RBP8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 SLC9A1P19634 815 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 STAT3P40763 770 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 TNNC1P63316 161 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 USP17L24Q0WX57 530 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 KCNH2Q12809 1159 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 TMEM119Q4V9L6 283 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 USP17L6PQ6QN14 398 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 AMIGO3Q86WK7 504 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 ADGRF4Q8IZF3 695 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 OR2W6PQ8NHA6 318 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 RUBCNQ92622 972 aa8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 ARHGEF1Q92888 912 aaKnown RBP8.27□□□□□ -1.09
SMARCC1-202ENST00000425518 MTMR4Q9NYA4 1195 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms