RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 MAN2A1Q16706 1144 aa12.82□□□□□ -0.36
UBR4-207ENST00000425413 ARSHQ5FYA8 562 aa12.82□□□□□ -0.36
UBR4-207ENST00000425413 UTP14CQ5TAP6 766 aaKnown RBP12.82□□□□□ -0.36
UBR4-207ENST00000425413 SRGAP1Q7Z6B7 1085 aa12.82□□□□□ -0.36
UBR4-207ENST00000425413 DEFB132Q7Z7B7 95 aa12.82□□□□□ -0.36
UBR4-207ENST00000425413 CCDC65Q8IXS2 484 aa12.82□□□□□ -0.36
UBR4-207ENST00000425413 ETNPPLQ8TBG4 499 aa12.82□□□□□ -0.36
UBR4-207ENST00000425413 HINFPQ9BQA5 517 aa12.82□□□□□ -0.36
UBR4-207ENST00000425413 DEF6Q9H4E7 631 aa12.82□□□□□ -0.36
UBR4-207ENST00000425413 PPP1R1BQ9UD71 204 aaPredicted RBP12.82□□□□□ -0.36
UBR4-207ENST00000425413 LRRC53A6NM62 1247 aa12.81□□□□□ -0.36
UBR4-207ENST00000425413 MSH4O15457 936 aa12.81□□□□□ -0.36
UBR4-207ENST00000425413 ENTPD3O75355 529 aa12.81□□□□□ -0.36
UBR4-207ENST00000425413 ATP1A1P05023 1023 aaKnown RBP12.81□□□□□ -0.36
UBR4-207ENST00000425413 PNMA6AP0CW24 399 aaPredicted RBP12.81□□□□□ -0.36
UBR4-207ENST00000425413 CYLC1P35663 651 aaPredicted RBP12.81□□□□□ -0.36
UBR4-207ENST00000425413 PPP1R2P41236 205 aa12.81□□□□□ -0.36
UBR4-207ENST00000425413 STAT2P52630 851 aa12.81□□□□□ -0.36
UBR4-207ENST00000425413 RSBN1LQ6PCB5 846 aaPredicted RBP12.81□□□□□ -0.36
UBR4-207ENST00000425413 RSRC2Q7L4I2 434 aaKnown RBP12.81□□□□□ -0.36
UBR4-207ENST00000425413 CACNA2D4Q7Z3S7 1137 aa12.81□□□□□ -0.36
UBR4-207ENST00000425413 TTLL6Q8N841 843 aa12.81□□□□□ -0.36
UBR4-207ENST00000425413 GMCL1Q96IK5 515 aa12.81□□□□□ -0.36
UBR4-207ENST00000425413 ERGIC2Q96RQ1 377 aa12.81□□□□□ -0.36
UBR4-207ENST00000425413 LRRC27Q9C0I9 530 aa12.81□□□□□ -0.36
UBR4-207ENST00000425413 BHMT2Q9H2M3 363 aa12.81□□□□□ -0.36
UBR4-207ENST00000425413 IKZF4Q9H2S9 585 aa12.81□□□□□ -0.36
UBR4-207ENST00000425413 FHOD1Q9Y613 1164 aa12.81□□□□□ -0.36
UBR4-207ENST00000425413 KDM3AQ9Y4C1 1321 aa12.81□□□□□ -0.36
UBR4-207ENST00000425413 SMCHD1A6NHR9 2005 aa12.81□□□□□ -0.36
UBR4-207ENST00000425413 FAM170AA1A519 330 aa12.81□□□□□ -0.36
UBR4-207ENST00000425413 EML1O00423 815 aa12.81□□□□□ -0.36
UBR4-207ENST00000425413 LRRC63Q05C16 580 aa12.81□□□□□ -0.36
UBR4-207ENST00000425413 EHHADHQ08426 723 aa12.81□□□□□ -0.36
UBR4-207ENST00000425413 CTTNQ14247 550 aaKnown RBP12.81□□□□□ -0.36
UBR4-207ENST00000425413 GMCL1P1Q8NEA9 526 aa12.81□□□□□ -0.36
UBR4-207ENST00000425413 LENG9Q96B70 501 aa12.81□□□□□ -0.36
UBR4-207ENST00000425413 NUP58Q9BVL2 599 aa12.81□□□□□ -0.36
UBR4-207ENST00000425413 EMILIN3Q9NT22 766 aa12.81□□□□□ -0.36
UBR4-207ENST00000425413 SIK3Q9Y2K2 1263 aa12.81□□□□□ -0.36
UBR4-207ENST00000425413 ZNF263O14978 683 aa12.81□□□□□ -0.36
UBR4-207ENST00000425413 PRPF6O94906 941 aaKnown RBP12.81□□□□□ -0.36
UBR4-207ENST00000425413 DPEP1P16444 411 aa12.81□□□□□ -0.36
UBR4-207ENST00000425413 EIF4A3P38919 411 aaKnown RBP12.81□□□□□ -0.36
UBR4-207ENST00000425413 SPIRE1Q08AE8 756 aa12.81□□□□□ -0.36
UBR4-207ENST00000425413 DGKZQ13574 1117 aa12.81□□□□□ -0.36
UBR4-207ENST00000425413 SFR1Q86XK3 245 aa12.81□□□□□ -0.36
UBR4-207ENST00000425413 SLFN12Q8IYM2 578 aa12.81□□□□□ -0.36
UBR4-207ENST00000425413 SCFD1Q8WVM8 642 aa12.81□□□□□ -0.36
UBR4-207ENST00000425413 PSMB7Q99436 277 aa12.81□□□□□ -0.36
UBR4-207ENST00000425413 GLT8D2Q9H1C3 349 aa12.81□□□□□ -0.36
UBR4-207ENST00000425413 ARHGAP20Q9P2F6 1191 aa12.81□□□□□ -0.36
UBR4-207ENST00000425413 MYO6Q9UM54 1294 aa12.81□□□□□ -0.36
UBR4-207ENST00000425413 DNM3Q9UQ16 869 aa12.81□□□□□ -0.36
UBR4-207ENST00000425413 AKR1B10O60218 316 aa12.8□□□□□ -0.36
UBR4-207ENST00000425413 SPATA31C1P0DKV0 1188 aa12.8□□□□□ -0.36
UBR4-207ENST00000425413 FKBP1AP62942 108 aaKnown RBP12.8□□□□□ -0.36
UBR4-207ENST00000425413 FKBP3Q00688 224 aaKnown RBP12.8□□□□□ -0.36
UBR4-207ENST00000425413 SEMA3FQ13275 785 aa12.8□□□□□ -0.36
UBR4-207ENST00000425413 AP3B2Q13367 1082 aa12.8□□□□□ -0.36
UBR4-207ENST00000425413 MEA1Q16626 185 aa12.8□□□□□ -0.36
UBR4-207ENST00000425413 TDRD12Q587J7 1177 aaKnown RBP12.8□□□□□ -0.36
UBR4-207ENST00000425413 TPH2Q8IWU9 490 aa12.8□□□□□ -0.36
UBR4-207ENST00000425413 GPR161Q8N6U8 529 aaKnown RBP12.8□□□□□ -0.36
UBR4-207ENST00000425413 NOA1Q8NC60 698 aaKnown RBP12.8□□□□□ -0.36
UBR4-207ENST00000425413 REEP2Q9BRK0 252 aa12.8□□□□□ -0.36
UBR4-207ENST00000425413 ARHGEF10LQ9HCE6 1279 aa12.8□□□□□ -0.36
UBR4-207ENST00000425413 ZBTB21Q9ULJ3 1066 aa12.8□□□□□ -0.36
UBR4-207ENST00000425413 COL4A3BPQ9Y5P4 624 aa12.8□□□□□ -0.36
UBR4-207ENST00000425413 DDX39AO00148 427 aaKnown RBP12.8□□□□□ -0.36
UBR4-207ENST00000425413 FGFR1OPO95684 399 aaKnown RBP12.8□□□□□ -0.36
UBR4-207ENST00000425413 SLC12A3P55017 1021 aa12.8□□□□□ -0.36
UBR4-207ENST00000425413 KRT83P78385 493 aa12.8□□□□□ -0.36
UBR4-207ENST00000425413 BMS1Q14692 1282 aaKnown RBP12.8□□□□□ -0.36
UBR4-207ENST00000425413 SPA17Q15506 151 aa12.8□□□□□ -0.36
UBR4-207ENST00000425413 NBPF9Q3BBW0 867 aa12.8□□□□□ -0.36
UBR4-207ENST00000425413 NEK11Q8NG66 645 aa12.8□□□□□ -0.36
UBR4-207ENST00000425413 MLXIPQ9HAP2 919 aa12.8□□□□□ -0.36
UBR4-207ENST00000425413 QSER1Q2KHR3 1735 aa12.79□□□□□ -0.36
UBR4-207ENST00000425413 SIPA1L1O43166 1804 aa12.79□□□□□ -0.36
UBR4-207ENST00000425413 ZNF185O15231 689 aa12.79□□□□□ -0.36
UBR4-207ENST00000425413 POLR3GO15318 223 aaPredicted RBP12.79□□□□□ -0.36
UBR4-207ENST00000425413 MYBP10242 640 aa12.79□□□□□ -0.36
UBR4-207ENST00000425413 SREBF1P36956 1147 aa12.79□□□□□ -0.36
UBR4-207ENST00000425413 KCNA1Q09470 495 aa12.79□□□□□ -0.36
UBR4-207ENST00000425413 PSMD2Q13200 908 aa12.79□□□□□ -0.36
UBR4-207ENST00000425413 ADAM9Q13443 819 aa12.79□□□□□ -0.36
UBR4-207ENST00000425413 HAUS3Q68CZ6 603 aa12.79□□□□□ -0.36
UBR4-207ENST00000425413 SUPT20HQ8NEM7 779 aa12.79□□□□□ -0.36
UBR4-207ENST00000425413 RABGGTAQ92696 567 aa12.79□□□□□ -0.36
UBR4-207ENST00000425413 PNKPQ96T60 521 aa12.79□□□□□ -0.36
UBR4-207ENST00000425413 NAP1L4Q99733 375 aaKnown RBP12.79□□□□□ -0.36
UBR4-207ENST00000425413 RUSC1Q9BVN2 902 aa12.79□□□□□ -0.36
UBR4-207ENST00000425413 HAUS4Q9H6D7 363 aa12.79□□□□□ -0.36
UBR4-207ENST00000425413 CYP3A7-CYP3A51PA0A087WV96 503 aa12.79□□□□□ -0.36
UBR4-207ENST00000425413 CTAGE15A4D2H0 777 aa12.79□□□□□ -0.36
UBR4-207ENST00000425413 KRT86O43790 486 aa12.79□□□□□ -0.36
UBR4-207ENST00000425413 SASH3O75995 380 aa12.79□□□□□ -0.36
UBR4-207ENST00000425413 CTAGE8P0CG41 777 aa12.79□□□□□ -0.36
UBR4-207ENST00000425413 CYP3A7P24462 503 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms