RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 IFIH1Q9BYX4 1025 aaKnown RBP14.17□□□□□ -0.14
HLA-DQB3-203ENST00000425319 RNPEPQ9H4A4 650 aa14.17□□□□□ -0.14
HLA-DQB3-203ENST00000425319 NSUN3Q9H649 340 aaKnown RBP14.17□□□□□ -0.14
HLA-DQB3-203ENST00000425319 PRKAG3Q9UGI9 489 aa14.17□□□□□ -0.14
HLA-DQB3-203ENST00000425319 SEC63Q9UGP8 760 aaKnown RBP14.17□□□□□ -0.14
HLA-DQB3-203ENST00000425319 MYO9BQ13459 2157 aa14.17□□□□□ -0.14
HLA-DQB3-203ENST00000425319 NRCAMQ92823 1304 aa14.16□□□□□ -0.14
HLA-DQB3-203ENST00000425319 PALM3A6NDB9 673 aaPredicted RBP14.16□□□□□ -0.14
HLA-DQB3-203ENST00000425319 LGALS2P05162 132 aa14.16□□□□□ -0.14
HLA-DQB3-203ENST00000425319 UBA1P22314 1058 aaKnown RBP14.16□□□□□ -0.14
HLA-DQB3-203ENST00000425319 HOXD11P31277 338 aaPredicted RBP14.16□□□□□ -0.14
HLA-DQB3-203ENST00000425319 KIF5BP33176 963 aa14.16□□□□□ -0.14
HLA-DQB3-203ENST00000425319 METTL7BQ6UX53 244 aa14.16□□□□□ -0.14
HLA-DQB3-203ENST00000425319 PLEKHM2Q8IWE5 1019 aa14.16□□□□□ -0.14
HLA-DQB3-203ENST00000425319 SMC5Q8IY18 1101 aa14.16□□□□□ -0.14
HLA-DQB3-203ENST00000425319 STAG2Q8N3U4 1231 aa14.16□□□□□ -0.14
HLA-DQB3-203ENST00000425319 NCOA7Q8NI08 942 aa14.16□□□□□ -0.14
HLA-DQB3-203ENST00000425319 PABPC5Q96DU9 382 aaKnown RBP14.16□□□□□ -0.14
HLA-DQB3-203ENST00000425319 PIGSQ96S52 555 aa14.16□□□□□ -0.14
HLA-DQB3-203ENST00000425319 POP1Q99575 1024 aaKnown RBP14.16□□□□□ -0.14
HLA-DQB3-203ENST00000425319 C11orf84Q9BUA3 381 aaPredicted RBP14.16□□□□□ -0.14
HLA-DQB3-203ENST00000425319 LMAN2LQ9H0V9 348 aa14.16□□□□□ -0.14
HLA-DQB3-203ENST00000425319 RNF216Q9NWF9 866 aaPredicted RBP14.16□□□□□ -0.14
HLA-DQB3-203ENST00000425319 GRXCR2A6NFK2 248 aa14.15□□□□□ -0.14
HLA-DQB3-203ENST00000425319 TREHO43280 583 aa14.15□□□□□ -0.14
HLA-DQB3-203ENST00000425319 ICAM3P32942 547 aa14.15□□□□□ -0.14
HLA-DQB3-203ENST00000425319 GNAQP50148 359 aa14.15□□□□□ -0.14
HLA-DQB3-203ENST00000425319 ARHGAP4P98171 946 aa14.15□□□□□ -0.14
HLA-DQB3-203ENST00000425319 NUCB1Q02818 461 aa14.15□□□□□ -0.14
HLA-DQB3-203ENST00000425319 UTP14CQ5TAP6 766 aaKnown RBP14.15□□□□□ -0.14
HLA-DQB3-203ENST00000425319 TAF2Q6P1X5 1199 aa14.15□□□□□ -0.14
HLA-DQB3-203ENST00000425319 CYFIP1Q7L576 1253 aa14.15□□□□□ -0.14
HLA-DQB3-203ENST00000425319 TMTC2Q8N394 836 aa14.15□□□□□ -0.14
HLA-DQB3-203ENST00000425319 CTCFLQ8NI51 663 aaPredicted RBP14.15□□□□□ -0.14
HLA-DQB3-203ENST00000425319 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.15□□□□□ -0.14
HLA-DQB3-203ENST00000425319 SP7Q8TDD2 431 aaPredicted RBP14.15□□□□□ -0.14
HLA-DQB3-203ENST00000425319 MTMR8Q96EF0 704 aa14.15□□□□□ -0.14
HLA-DQB3-203ENST00000425319 RRP36Q96EU6 259 aaKnown RBP14.15□□□□□ -0.14
HLA-DQB3-203ENST00000425319 SENP7Q9BQF6 1050 aa14.15□□□□□ -0.14
HLA-DQB3-203ENST00000425319 KCNH6Q9H252 994 aa14.15□□□□□ -0.14
HLA-DQB3-203ENST00000425319 RIOX1Q9H6W3 641 aa14.15□□□□□ -0.14
HLA-DQB3-203ENST00000425319 RTEL1Q9NZ71 1219 aa14.15□□□□□ -0.14
HLA-DQB3-203ENST00000425319 MAD2L2Q9UI95 211 aa14.15□□□□□ -0.14
HLA-DQB3-203ENST00000425319 SCN10AQ9Y5Y9 1956 aa14.14□□□□□ -0.15
HLA-DQB3-203ENST00000425319 SPATA31C2B4DYI2 1134 aa14.14□□□□□ -0.15
HLA-DQB3-203ENST00000425319 M0QZ92 97 aa14.14□□□□□ -0.15
HLA-DQB3-203ENST00000425319 CTSHP09668 335 aa14.14□□□□□ -0.15
HLA-DQB3-203ENST00000425319 GRM4Q14833 912 aa14.14□□□□□ -0.15
HLA-DQB3-203ENST00000425319 FAM43BQ6ZT52 329 aaPredicted RBP14.14□□□□□ -0.15
HLA-DQB3-203ENST00000425319 LZTS2Q9BRK4 669 aa14.14□□□□□ -0.15
HLA-DQB3-203ENST00000425319 EHMT1Q9H9B1 1298 aa14.14□□□□□ -0.15
HLA-DQB3-203ENST00000425319 SETD4Q9NVD3 440 aa14.14□□□□□ -0.15
HLA-DQB3-203ENST00000425319 CLDND1Q9NY35 253 aa14.14□□□□□ -0.15
HLA-DQB3-203ENST00000425319 TTC28Q96AY4 2481 aa14.14□□□□□ -0.15
HLA-DQB3-203ENST00000425319 MAFGO15525 162 aa14.13□□□□□ -0.15
HLA-DQB3-203ENST00000425319 DCXO43602 365 aa14.13□□□□□ -0.15
HLA-DQB3-203ENST00000425319 RGS20O76081 388 aa14.13□□□□□ -0.15
HLA-DQB3-203ENST00000425319 CTNNB1P35222 781 aa14.13□□□□□ -0.15
HLA-DQB3-203ENST00000425319 SP2Q02086 613 aa14.13□□□□□ -0.15
HLA-DQB3-203ENST00000425319 SEPT1Q8WYJ6 367 aa14.13□□□□□ -0.15
HLA-DQB3-203ENST00000425319 GLG1Q92896 1179 aa14.13□□□□□ -0.15
HLA-DQB3-203ENST00000425319 FAM86C2PA6NEL3 165 aa14.12□□□□□ -0.15
HLA-DQB3-203ENST00000425319 RRN3P2A6NIE6 340 aa14.12□□□□□ -0.15
HLA-DQB3-203ENST00000425319 H3BQ06 376 aaPredicted RBP14.12□□□□□ -0.15
HLA-DQB3-203ENST00000425319 STAG3L1P0CL83 205 aa14.12□□□□□ -0.15
HLA-DQB3-203ENST00000425319 IL9P15248 144 aa14.12□□□□□ -0.15
HLA-DQB3-203ENST00000425319 SMARCA1P28370 1054 aa14.12□□□□□ -0.15
HLA-DQB3-203ENST00000425319 BMPR1AP36894 532 aa14.12□□□□□ -0.15
HLA-DQB3-203ENST00000425319 SP4Q02446 784 aa14.12□□□□□ -0.15
HLA-DQB3-203ENST00000425319 MBTPS1Q14703 1052 aa14.12□□□□□ -0.15
HLA-DQB3-203ENST00000425319 SEC23AQ15436 765 aa14.12□□□□□ -0.15
HLA-DQB3-203ENST00000425319 TCEAL5Q5H9L2 206 aa14.12□□□□□ -0.15
HLA-DQB3-203ENST00000425319 FAM26DQ5JW98 314 aa14.12□□□□□ -0.15
HLA-DQB3-203ENST00000425319 IER5Q5VY09 327 aa14.12□□□□□ -0.15
HLA-DQB3-203ENST00000425319 TRAF7Q6Q0C0 670 aa14.12□□□□□ -0.15
HLA-DQB3-203ENST00000425319 CASC1Q6TDU7 716 aa14.12□□□□□ -0.15
HLA-DQB3-203ENST00000425319 SPRED2Q7Z698 418 aa14.12□□□□□ -0.15
HLA-DQB3-203ENST00000425319 NEK9Q8TD19 979 aa14.12□□□□□ -0.15
HLA-DQB3-203ENST00000425319 MFSD14AQ96MC6 490 aa14.12□□□□□ -0.15
HLA-DQB3-203ENST00000425319 INPP4AQ96PE3 977 aaPredicted RBP14.12□□□□□ -0.15
HLA-DQB3-203ENST00000425319 GPR20Q99678 358 aa14.12□□□□□ -0.15
HLA-DQB3-203ENST00000425319 SMARCAD1Q9H4L7 1026 aa14.12□□□□□ -0.15
HLA-DQB3-203ENST00000425319 ERAP1Q9NZ08 941 aa14.12□□□□□ -0.15
HLA-DQB3-203ENST00000425319 OPLAHO14841 1288 aa14.11□□□□□ -0.15
HLA-DQB3-203ENST00000425319 BTG3Q14201 252 aaPredicted RBP14.11□□□□□ -0.15
HLA-DQB3-203ENST00000425319 TCTN1Q2MV58 587 aa14.11□□□□□ -0.15
HLA-DQB3-203ENST00000425319 NAALADL2Q58DX5 795 aa14.11□□□□□ -0.15
HLA-DQB3-203ENST00000425319 ODR4Q5SWX8 454 aa14.11□□□□□ -0.15
HLA-DQB3-203ENST00000425319 PCNX4Q63HM2 1172 aa14.11□□□□□ -0.15
HLA-DQB3-203ENST00000425319 NFXL1Q6ZNB6 911 aa14.11□□□□□ -0.15
HLA-DQB3-203ENST00000425319 PIBF1Q8WXW3 757 aa14.11□□□□□ -0.15
HLA-DQB3-203ENST00000425319 WNT8BQ93098 351 aa14.11□□□□□ -0.15
HLA-DQB3-203ENST00000425319 ZFP91Q96JP5 570 aaPredicted RBP14.11□□□□□ -0.15
HLA-DQB3-203ENST00000425319 MAP3K14Q99558 947 aa14.11□□□□□ -0.15
HLA-DQB3-203ENST00000425319 PLVAPQ9BX97 442 aa14.11□□□□□ -0.15
HLA-DQB3-203ENST00000425319 FTHL17Q9BXU8 183 aa14.11□□□□□ -0.15
HLA-DQB3-203ENST00000425319 AZI2Q9H6S1 392 aa14.11□□□□□ -0.15
HLA-DQB3-203ENST00000425319 CCDC69A6NI79 296 aa14.1□□□□□ -0.15
HLA-DQB3-203ENST00000425319 SPDYE3A6NKU9 549 aa14.1□□□□□ -0.15
HLA-DQB3-203ENST00000425319 PPP1R11O60927 126 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms