RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 FBXO11Q86XK2 927 aa8.08□□□□□ -1.12
EPHA4-206ENST00000424339 MCF2L2Q86YR7 1114 aa8.08□□□□□ -1.12
EPHA4-206ENST00000424339 ABRAQ8N0Z2 381 aa8.08□□□□□ -1.12
EPHA4-206ENST00000424339 NSUN7Q8NE18 718 aaKnown RBP8.08□□□□□ -1.12
EPHA4-206ENST00000424339 REPS2Q8NFH8 660 aa8.08□□□□□ -1.12
EPHA4-206ENST00000424339 UBA5Q9GZZ9 404 aa8.08□□□□□ -1.12
EPHA4-206ENST00000424339 SPATC1LQ9H0A9 340 aa8.08□□□□□ -1.12
EPHA4-206ENST00000424339 NCOA5Q9HCD5 579 aaKnown RBP8.08□□□□□ -1.12
EPHA4-206ENST00000424339 RNF186Q9NXI6 227 aa8.08□□□□□ -1.12
EPHA4-206ENST00000424339 CCPG1Q9ULG6 757 aa8.08□□□□□ -1.12
EPHA4-206ENST00000424339 MRPL11Q9Y3B7 192 aaKnown RBP8.08□□□□□ -1.12
EPHA4-206ENST00000424339 BAZ2BQ9UIF8 2168 aaKnown RBP8.08□□□□□ -1.12
EPHA4-206ENST00000424339 PFASO15067 1338 aa8.07□□□□□ -1.12
EPHA4-206ENST00000424339 PTPDC1A2A3K4 754 aa8.07□□□□□ -1.12
EPHA4-206ENST00000424339 TRPA1O75762 1119 aa8.07□□□□□ -1.12
EPHA4-206ENST00000424339 LARGE1O95461 756 aa8.07□□□□□ -1.12
EPHA4-206ENST00000424339 CALML3P27482 149 aa8.07□□□□□ -1.12
EPHA4-206ENST00000424339 GNA11P29992 359 aa8.07□□□□□ -1.12
EPHA4-206ENST00000424339 TRIM29Q14134 588 aa8.07□□□□□ -1.12
EPHA4-206ENST00000424339 TMEM132BQ14DG7 1078 aa8.07□□□□□ -1.12
EPHA4-206ENST00000424339 TUSC1Q2TAM9 212 aa8.07□□□□□ -1.12
EPHA4-206ENST00000424339 SNRNP48Q6IEG0 339 aaKnown RBP8.07□□□□□ -1.12
EPHA4-206ENST00000424339 RASGRP2Q7LDG7 609 aa8.07□□□□□ -1.12
EPHA4-206ENST00000424339 HOMER1Q86YM7 354 aa8.07□□□□□ -1.12
EPHA4-206ENST00000424339 CCDC83Q8IWF9 413 aa8.07□□□□□ -1.12
EPHA4-206ENST00000424339 ANKRD13CQ8N6S4 541 aa8.07□□□□□ -1.12
EPHA4-206ENST00000424339 NECAB1Q8N987 351 aa8.07□□□□□ -1.12
EPHA4-206ENST00000424339 FAM184AQ8NB25 1140 aa8.07□□□□□ -1.12
EPHA4-206ENST00000424339 SMARCC2Q8TAQ2 1214 aa8.07□□□□□ -1.12
EPHA4-206ENST00000424339 BICD2Q8TD16 824 aa8.07□□□□□ -1.12
EPHA4-206ENST00000424339 SOCS4Q8WXH5 440 aa8.07□□□□□ -1.12
EPHA4-206ENST00000424339 PIGSQ96S52 555 aa8.07□□□□□ -1.12
EPHA4-206ENST00000424339 ZIC5Q96T25 663 aa8.07□□□□□ -1.12
EPHA4-206ENST00000424339 ARID3AQ99856 593 aa8.07□□□□□ -1.12
EPHA4-206ENST00000424339 PAGR1Q9BTK6 254 aa8.07□□□□□ -1.12
EPHA4-206ENST00000424339 SLC26A6Q9BXS9 759 aa8.07□□□□□ -1.12
EPHA4-206ENST00000424339 ACAD9Q9H845 621 aa8.07□□□□□ -1.12
EPHA4-206ENST00000424339 BARHL2Q9NY43 387 aa8.07□□□□□ -1.12
EPHA4-206ENST00000424339 SLC5A4Q9NY91 659 aa8.07□□□□□ -1.12
EPHA4-206ENST00000424339 ORC3Q9UBD5 711 aaPredicted RBP8.07□□□□□ -1.12
EPHA4-206ENST00000424339 RBPJLQ9UBG7 517 aa8.07□□□□□ -1.12
EPHA4-206ENST00000424339 MKL2Q9ULH7 1088 aa8.07□□□□□ -1.12
EPHA4-206ENST00000424339 SMC3Q9UQE7 1217 aa8.07□□□□□ -1.12
EPHA4-206ENST00000424339 PCDHA1Q9Y5I3 950 aa8.07□□□□□ -1.12
EPHA4-206ENST00000424339 IVNS1ABPQ9Y6Y0 642 aa8.07□□□□□ -1.12
EPHA4-206ENST00000424339 ZNF536O15090 1300 aa8.06□□□□□ -1.12
EPHA4-206ENST00000424339 ZNF236Q9UL36 1845 aa8.06□□□□□ -1.12
EPHA4-206ENST00000424339 LOC102724159A0A0B4J2E5 919 aa8.06□□□□□ -1.12
EPHA4-206ENST00000424339 HOXD10P28358 340 aa8.06□□□□□ -1.12
EPHA4-206ENST00000424339 RNF144AP50876 292 aaPredicted RBP8.06□□□□□ -1.12
EPHA4-206ENST00000424339 MRPL12P52815 198 aaKnown RBP8.06□□□□□ -1.12
EPHA4-206ENST00000424339 PRMT2P55345 433 aa8.06□□□□□ -1.12
EPHA4-206ENST00000424339 SNRPNP63162 240 aaKnown RBP8.06□□□□□ -1.12
EPHA4-206ENST00000424339 SP3Q02447 781 aa8.06□□□□□ -1.12
EPHA4-206ENST00000424339 GHRHRQ02643 423 aa8.06□□□□□ -1.12
EPHA4-206ENST00000424339 PTK2Q05397 1052 aa8.06□□□□□ -1.12
EPHA4-206ENST00000424339 PLS1Q14651 629 aa8.06□□□□□ -1.12
EPHA4-206ENST00000424339 PWP2Q15269 919 aaKnown RBP8.06□□□□□ -1.12
EPHA4-206ENST00000424339 HEATR3Q7Z4Q2 680 aa8.06□□□□□ -1.12
EPHA4-206ENST00000424339 RAB11FIP4Q86YS3 637 aa8.06□□□□□ -1.12
EPHA4-206ENST00000424339 CPXCR1Q8N123 301 aa8.06□□□□□ -1.12
EPHA4-206ENST00000424339 CCDC82Q8N4S0 544 aa8.06□□□□□ -1.12
EPHA4-206ENST00000424339 CUL5Q93034 780 aa8.06□□□□□ -1.12
EPHA4-206ENST00000424339 PHKBQ93100 1093 aa8.06□□□□□ -1.12
EPHA4-206ENST00000424339 ERO1AQ96HE7 468 aa8.06□□□□□ -1.12
EPHA4-206ENST00000424339 GAS2L1Q99501 681 aaPredicted RBP8.06□□□□□ -1.12
EPHA4-206ENST00000424339 MOV10L1Q9BXT6 1211 aaKnown RBP8.06□□□□□ -1.12
EPHA4-206ENST00000424339 CWC22Q9HCG8 908 aaKnown RBP8.06□□□□□ -1.12
EPHA4-206ENST00000424339 RAVER2Q9HCJ3 691 aaKnown RBP8.06□□□□□ -1.12
EPHA4-206ENST00000424339 VAT1LQ9HCJ6 419 aa8.06□□□□□ -1.12
EPHA4-206ENST00000424339 BRMS1Q9HCU9 246 aa8.06□□□□□ -1.12
EPHA4-206ENST00000424339 BTBD7Q9P203 1132 aa8.06□□□□□ -1.12
EPHA4-206ENST00000424339 FKBPLQ9UIM3 349 aa8.06□□□□□ -1.12
EPHA4-206ENST00000424339 RBBP6Q7Z6E9 1792 aaKnown RBP8.06□□□□□ -1.12
EPHA4-206ENST00000424339 B4DLN1 442 aa8.05□□□□□ -1.12
EPHA4-206ENST00000424339 PIK3CDO00329 1044 aa8.05□□□□□ -1.12
EPHA4-206ENST00000424339 FKTNO75072 461 aa8.05□□□□□ -1.12
EPHA4-206ENST00000424339 CNMDO75829 334 aa8.05□□□□□ -1.12
EPHA4-206ENST00000424339 CTDNEP1O95476 244 aa8.05□□□□□ -1.12
EPHA4-206ENST00000424339 FOSP01100 380 aaPredicted RBP8.05□□□□□ -1.12
EPHA4-206ENST00000424339 FCER1AP12319 257 aa8.05□□□□□ -1.12
EPHA4-206ENST00000424339 ALAS1P13196 640 aa8.05□□□□□ -1.12
EPHA4-206ENST00000424339 ERCC3P19447 782 aa8.05□□□□□ -1.12
EPHA4-206ENST00000424339 NAPAP54920 295 aa8.05□□□□□ -1.12
EPHA4-206ENST00000424339 FCGRTP55899 365 aa8.05□□□□□ -1.12
EPHA4-206ENST00000424339 LACTBP83111 547 aaPredicted RBP8.05□□□□□ -1.12
EPHA4-206ENST00000424339 KCTD2Q14681 263 aa8.05□□□□□ -1.12
EPHA4-206ENST00000424339 SAFBQ15424 915 aaKnown RBP eCLIP8.05□□□□□ -1.12
EPHA4-206ENST00000424339 NFKBIBQ15653 356 aa8.05□□□□□ -1.12
EPHA4-206ENST00000424339 SLC35G1Q2M3R5 365 aa8.05□□□□□ -1.12
EPHA4-206ENST00000424339 NBPF20Q3BBV1 942 aa8.05□□□□□ -1.12
EPHA4-206ENST00000424339 CCDC174Q6PII3 467 aa8.05□□□□□ -1.12
EPHA4-206ENST00000424339 NCAPG2Q86XI2 1143 aa8.05□□□□□ -1.12
EPHA4-206ENST00000424339 PARP9Q8IXQ6 854 aa8.05□□□□□ -1.12
EPHA4-206ENST00000424339 CMTR1Q8N1G2 835 aaKnown RBP8.05□□□□□ -1.12
EPHA4-206ENST00000424339 COA7Q96BR5 231 aa8.05□□□□□ -1.12
EPHA4-206ENST00000424339 MPHOSPH6Q99547 160 aaKnown RBP8.05□□□□□ -1.12
EPHA4-206ENST00000424339 ZMYND12Q9H0C1 365 aa8.05□□□□□ -1.12
EPHA4-206ENST00000424339 CPVLQ9H3G5 476 aa8.05□□□□□ -1.12
EPHA4-206ENST00000424339 EHMT1Q9H9B1 1298 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms