RNA–Protein interactions for RNA: ENST00000424089.5

POLR1A-204, Transcript of RNA polymerase I subunit A, human

TSL 3

Gene POLR1A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR1A-204	ENST00000424089	NOC3L	Q8WTT2	800 aa	Known RBP	11.24	□□□□□ -0.61
POLR1A-204	ENST00000424089	UBE2O	Q9C0C9	1292 aa	Known RBP	11.24	□□□□□ -0.61
POLR1A-204	ENST00000424089	GOPC	Q9HD26	462 aa		11.24	□□□□□ -0.61
POLR1A-204	ENST00000424089	LRWD1	Q9UFC0	647 aa		11.24	□□□□□ -0.61
POLR1A-204	ENST00000424089	AGTPBP1	Q9UPW5	1226 aa		11.24	□□□□□ -0.61
POLR1A-204	ENST00000424089	AFG3L2	Q9Y4W6	797 aa		11.24	□□□□□ -0.61
POLR1A-204	ENST00000424089	RPTOR	Q8N122	1335 aa		11.24	□□□□□ -0.61
POLR1A-204	ENST00000424089	SYNRG	Q9UMZ2	1314 aa		11.24	□□□□□ -0.61
POLR1A-204	ENST00000424089	PHIP	Q8WWQ0	1821 aa		11.23	□□□□□ -0.61
POLR1A-204	ENST00000424089		A0A1B0GTH6	734 aa		11.23	□□□□□ -0.61
POLR1A-204	ENST00000424089	PVALEF	A0A1B0GWK0	134 aa		11.23	□□□□□ -0.61
POLR1A-204	ENST00000424089	TBX3	O15119	743 aa		11.23	□□□□□ -0.61
POLR1A-204	ENST00000424089	NDUFB10	O96000	172 aa		11.23	□□□□□ -0.61
POLR1A-204	ENST00000424089	GH2	P01242	217 aa		11.23	□□□□□ -0.61
POLR1A-204	ENST00000424089	SYN1	P17600	705 aa		11.23	□□□□□ -0.61
POLR1A-204	ENST00000424089	SLC16A2	P36021	539 aa		11.23	□□□□□ -0.61
POLR1A-204	ENST00000424089	TEC	P42680	631 aa		11.23	□□□□□ -0.61
POLR1A-204	ENST00000424089	CCZ1B	P86790	482 aa		11.23	□□□□□ -0.61
POLR1A-204	ENST00000424089	CCZ1	P86791	482 aa	Predicted RBP	11.23	□□□□□ -0.61
POLR1A-204	ENST00000424089	PAK1	Q13153	545 aa		11.23	□□□□□ -0.61
POLR1A-204	ENST00000424089	PABPC4	Q13310	644 aa	Known RBP eCLIP	11.23	□□□□□ -0.61
POLR1A-204	ENST00000424089	NR1I3	Q14994	352 aa		11.23	□□□□□ -0.61
POLR1A-204	ENST00000424089	TPD52L1	Q16890	204 aa	Predicted RBP	11.23	□□□□□ -0.61
POLR1A-204	ENST00000424089	FAM110C	Q1W6H9	321 aa		11.23	□□□□□ -0.61
POLR1A-204	ENST00000424089	SYDE2	Q5VT97	1194 aa		11.23	□□□□□ -0.61
POLR1A-204	ENST00000424089	KRT79	Q5XKE5	535 aa		11.23	□□□□□ -0.61
POLR1A-204	ENST00000424089	SPECC1L	Q69YQ0	1117 aa		11.23	□□□□□ -0.61
POLR1A-204	ENST00000424089	FCHSD1	Q86WN1	690 aa		11.23	□□□□□ -0.61
POLR1A-204	ENST00000424089	FBXO11	Q86XK2	927 aa		11.23	□□□□□ -0.61
POLR1A-204	ENST00000424089	KCTD17	Q8N5Z5	321 aa		11.23	□□□□□ -0.61
POLR1A-204	ENST00000424089	DIS3L	Q8TF46	1054 aa	Known RBP	11.23	□□□□□ -0.61
POLR1A-204	ENST00000424089	CHURC1	Q8WUH1	139 aa		11.23	□□□□□ -0.61
POLR1A-204	ENST00000424089	DHTKD1	Q96HY7	919 aa	Predicted RBP	11.23	□□□□□ -0.61
POLR1A-204	ENST00000424089	MBOAT7	Q96N66	472 aa		11.23	□□□□□ -0.61
POLR1A-204	ENST00000424089	MTR	Q99707	1265 aa		11.23	□□□□□ -0.61
POLR1A-204	ENST00000424089	C11orf49	Q9H6J7	331 aa		11.23	□□□□□ -0.61
POLR1A-204	ENST00000424089	HMX1	Q9NP08	348 aa	Predicted RBP	11.23	□□□□□ -0.61
POLR1A-204	ENST00000424089	TMEM260	Q9NX78	707 aa		11.23	□□□□□ -0.61
POLR1A-204	ENST00000424089	TMX2	Q9Y320	296 aa		11.23	□□□□□ -0.61
POLR1A-204	ENST00000424089	R3HCC1	Q9Y3T6	440 aa	Known RBP	11.23	□□□□□ -0.61
POLR1A-204	ENST00000424089	PAXBP1	Q9Y5B6	917 aa		11.23	□□□□□ -0.61
POLR1A-204	ENST00000424089	BICDL2	A1A5D9	508 aa		11.22	□□□□□ -0.61
POLR1A-204	ENST00000424089	PHF20L1	A8MW92	1017 aa		11.22	□□□□□ -0.61
POLR1A-204	ENST00000424089	PIK3CD	O00329	1044 aa		11.22	□□□□□ -0.61
POLR1A-204	ENST00000424089	PSMA7	O14818	248 aa		11.22	□□□□□ -0.61
POLR1A-204	ENST00000424089	CTNND1	O60716	968 aa	Known RBP	11.22	□□□□□ -0.61
POLR1A-204	ENST00000424089	COL9A1	P20849	921 aa		11.22	□□□□□ -0.61
POLR1A-204	ENST00000424089	TXK	P42681	527 aa		11.22	□□□□□ -0.61
POLR1A-204	ENST00000424089	MAGEA10	P43363	369 aa	Predicted RBP	11.22	□□□□□ -0.61
POLR1A-204	ENST00000424089	GCLC	P48506	637 aa	Predicted RBP	11.22	□□□□□ -0.61
POLR1A-204	ENST00000424089	TBX2	Q13207	712 aa	Predicted RBP	11.22	□□□□□ -0.61
POLR1A-204	ENST00000424089	SV2B	Q7L1I2	683 aa		11.22	□□□□□ -0.61
POLR1A-204	ENST00000424089	FAM160B2	Q86V87	743 aa		11.22	□□□□□ -0.61
POLR1A-204	ENST00000424089	SLFN12	Q8IYM2	578 aa		11.22	□□□□□ -0.61
POLR1A-204	ENST00000424089	ADSSL1	Q8N142	457 aa		11.22	□□□□□ -0.61
POLR1A-204	ENST00000424089	GIMAP8	Q8ND71	665 aa	Predicted RBP	11.22	□□□□□ -0.61
POLR1A-204	ENST00000424089	CDK5RAP3	Q96JB5	506 aa		11.22	□□□□□ -0.61
POLR1A-204	ENST00000424089	FAM161B	Q96MY7	647 aa		11.22	□□□□□ -0.61
POLR1A-204	ENST00000424089	NT5C3A	Q9H0P0	336 aa		11.22	□□□□□ -0.61
POLR1A-204	ENST00000424089	BLZF1	Q9H2G9	400 aa		11.22	□□□□□ -0.61
POLR1A-204	ENST00000424089	TMX1	Q9H3N1	280 aa		11.22	□□□□□ -0.61
POLR1A-204	ENST00000424089	LIMA1	Q9UHB6	759 aa	Known RBP	11.22	□□□□□ -0.61
POLR1A-204	ENST00000424089	DDX25	Q9UHL0	483 aa	Known RBP	11.22	□□□□□ -0.61
POLR1A-204	ENST00000424089	KDM3A	Q9Y4C1	1321 aa		11.21	□□□□□ -0.61
POLR1A-204	ENST00000424089	FAM196B	A6NMK8	535 aa		11.21	□□□□□ -0.61
POLR1A-204	ENST00000424089	TMEM232	C9JQI7	657 aa		11.21	□□□□□ -0.61
POLR1A-204	ENST00000424089	KLRC4	O43908	158 aa		11.21	□□□□□ -0.61
POLR1A-204	ENST00000424089	MARCH6	O60337	910 aa		11.21	□□□□□ -0.61
POLR1A-204	ENST00000424089	GDF11	O95390	407 aa		11.21	□□□□□ -0.61
POLR1A-204	ENST00000424089	CD44	P16070	742 aa	Known RBP	11.21	□□□□□ -0.61
POLR1A-204	ENST00000424089	PLCG1	P19174	1290 aa		11.21	□□□□□ -0.61
POLR1A-204	ENST00000424089	CDC25A	P30304	524 aa		11.21	□□□□□ -0.61
POLR1A-204	ENST00000424089	PSMD2	Q13200	908 aa		11.21	□□□□□ -0.61
POLR1A-204	ENST00000424089	KMT5B	Q4FZB7	885 aa		11.21	□□□□□ -0.61
POLR1A-204	ENST00000424089	HYI	Q5T013	277 aa		11.21	□□□□□ -0.61
POLR1A-204	ENST00000424089	ARMCX5	Q6P1M9	558 aa		11.21	□□□□□ -0.61
POLR1A-204	ENST00000424089	FOXR2	Q6PJQ5	311 aa		11.21	□□□□□ -0.61
POLR1A-204	ENST00000424089	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.21	□□□□□ -0.61
POLR1A-204	ENST00000424089	NELFB	Q8WX92	580 aa		11.21	□□□□□ -0.61
POLR1A-204	ENST00000424089	MED15	Q96RN5	788 aa		11.21	□□□□□ -0.61
POLR1A-204	ENST00000424089	MMTAG2	Q9BU76	263 aa	Known RBP	11.21	□□□□□ -0.61
POLR1A-204	ENST00000424089	TRIM9	Q9C026	710 aa		11.21	□□□□□ -0.61
POLR1A-204	ENST00000424089	THAP9	Q9H5L6	903 aa		11.21	□□□□□ -0.61
POLR1A-204	ENST00000424089	PNMA2	Q9UL42	364 aa		11.21	□□□□□ -0.61
POLR1A-204	ENST00000424089	PCDHA12	Q9UN75	941 aa		11.21	□□□□□ -0.61
POLR1A-204	ENST00000424089	ITIH6	Q6UXX5	1313 aa		11.2	□□□□□ -0.62
POLR1A-204	ENST00000424089	PP2D1	A8MPX8	630 aa		11.2	□□□□□ -0.62
POLR1A-204	ENST00000424089	EDIL3	O43854	480 aa		11.2	□□□□□ -0.62
POLR1A-204	ENST00000424089	RAD21	O60216	631 aa		11.2	□□□□□ -0.62
POLR1A-204	ENST00000424089	STX10	O60499	249 aa		11.2	□□□□□ -0.62
POLR1A-204	ENST00000424089	ASNS	P08243	561 aa		11.2	□□□□□ -0.62
POLR1A-204	ENST00000424089	CYP3A4	P08684	503 aa		11.2	□□□□□ -0.62
POLR1A-204	ENST00000424089	EEF1G	P26641	437 aa	Known RBP	11.2	□□□□□ -0.62
POLR1A-204	ENST00000424089	CIITA	P33076	1130 aa		11.2	□□□□□ -0.62
POLR1A-204	ENST00000424089	CAP2	P40123	477 aa		11.2	□□□□□ -0.62
POLR1A-204	ENST00000424089	STAT2	P52630	851 aa		11.2	□□□□□ -0.62
POLR1A-204	ENST00000424089	IK	Q13123	557 aa	Predicted RBP	11.2	□□□□□ -0.62
POLR1A-204	ENST00000424089	TRIM14	Q14142	442 aa		11.2	□□□□□ -0.62
POLR1A-204	ENST00000424089	UBE2S	Q16763	222 aa		11.2	□□□□□ -0.62
POLR1A-204	ENST00000424089		Q4G0T1	1027 aa		11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms