RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 SLC52A2Q9HAB3 445 aa7.38□□□□□ -1.23
LINC00458-201ENST00000423442 MBD1Q9UIS9 605 aaPredicted RBP7.38□□□□□ -1.23
LINC00458-201ENST00000423442 ZMYM5Q9UJ78 669 aa7.38□□□□□ -1.23
LINC00458-201ENST00000423442 USP42Q9H9J4 1324 aaKnown RBP7.37□□□□□ -1.23
LINC00458-201ENST00000423442 POLRMTO00411 1230 aaKnown RBP7.37□□□□□ -1.23
LINC00458-201ENST00000423442 TM4SF1P30408 202 aa7.37□□□□□ -1.23
LINC00458-201ENST00000423442 EPHB3P54753 998 aa7.37□□□□□ -1.23
LINC00458-201ENST00000423442 RHOVQ96L33 236 aa7.37□□□□□ -1.23
LINC00458-201ENST00000423442 HDAC8Q9BY41 377 aa7.37□□□□□ -1.23
LINC00458-201ENST00000423442 FOXP3Q9BZS1 431 aa7.37□□□□□ -1.23
LINC00458-201ENST00000423442 AFDNP55196 1824 aaKnown RBP7.36□□□□□ -1.23
LINC00458-201ENST00000423442 VIRMAQ69YN4 1812 aaKnown RBP7.36□□□□□ -1.23
LINC00458-201ENST00000423442 SCN11AQ9UI33 1791 aa7.36□□□□□ -1.23
LINC00458-201ENST00000423442 MAPK8IP3Q9UPT6 1336 aa7.36□□□□□ -1.23
LINC00458-201ENST00000423442 STARD3NLO95772 234 aa7.36□□□□□ -1.23
LINC00458-201ENST00000423442 GBP1P32455 592 aa7.36□□□□□ -1.23
LINC00458-201ENST00000423442 CRKLP46109 303 aaKnown RBP7.36□□□□□ -1.23
LINC00458-201ENST00000423442 FAM160A1Q05DH4 1040 aa7.36□□□□□ -1.23
LINC00458-201ENST00000423442 ZPBP2Q6X784 338 aa7.36□□□□□ -1.23
LINC00458-201ENST00000423442 RNF111Q6ZNA4 994 aa7.36□□□□□ -1.23
LINC00458-201ENST00000423442 CEP128Q6ZU80 1094 aa7.36□□□□□ -1.23
LINC00458-201ENST00000423442 FBXO27Q8NI29 283 aa7.36□□□□□ -1.23
LINC00458-201ENST00000423442 SYTL5Q8TDW5 730 aaPredicted RBP7.36□□□□□ -1.23
LINC00458-201ENST00000423442 MAP6Q96JE9 813 aa7.36□□□□□ -1.23
LINC00458-201ENST00000423442 ASCC2Q9H1I8 757 aaPredicted RBP7.36□□□□□ -1.23
LINC00458-201ENST00000423442 DLEC1Q9Y238 1755 aa7.36□□□□□ -1.23
LINC00458-201ENST00000423442 TMEM82A0PJX8 343 aa7.35□□□□□ -1.23
LINC00458-201ENST00000423442 CCDC85CA6NKD9 419 aa7.35□□□□□ -1.23
LINC00458-201ENST00000423442 HTATSF1O43719 755 aaKnown RBP7.35□□□□□ -1.23
LINC00458-201ENST00000423442 NRDCO43847 1150 aa7.35□□□□□ -1.23
LINC00458-201ENST00000423442 HSPA8P11142 646 aaKnown RBP7.35□□□□□ -1.23
LINC00458-201ENST00000423442 GBP2P32456 591 aaPredicted RBP7.35□□□□□ -1.23
LINC00458-201ENST00000423442 SLC39A6Q13433 755 aa7.35□□□□□ -1.23
LINC00458-201ENST00000423442 NFIXQ14938 502 aa7.35□□□□□ -1.23
LINC00458-201ENST00000423442 WDR43Q15061 677 aaKnown RBP eCLIP7.35□□□□□ -1.23
LINC00458-201ENST00000423442 SLC14A2Q15849 920 aa7.35□□□□□ -1.23
LINC00458-201ENST00000423442 TMC3Q7Z5M5 1100 aa7.35□□□□□ -1.23
LINC00458-201ENST00000423442 C2CD5Q86YS7 1000 aa7.35□□□□□ -1.23
LINC00458-201ENST00000423442 TMEM151BQ8IW70 566 aa7.35□□□□□ -1.23
LINC00458-201ENST00000423442 TTLL6Q8N841 843 aa7.35□□□□□ -1.23
LINC00458-201ENST00000423442 ENOX1Q8TC92 643 aaKnown RBP7.35□□□□□ -1.23
LINC00458-201ENST00000423442 TCTN2Q96GX1 697 aa7.35□□□□□ -1.23
LINC00458-201ENST00000423442 HHIPL1Q96JK4 782 aa7.35□□□□□ -1.23
LINC00458-201ENST00000423442 PHACTR3Q96KR7 559 aa7.35□□□□□ -1.23
LINC00458-201ENST00000423442 SIGLEC10Q96LC7 697 aa7.35□□□□□ -1.23
LINC00458-201ENST00000423442 TMEM74Q96NL1 305 aa7.35□□□□□ -1.23
LINC00458-201ENST00000423442 SIRT5Q9NXA8 310 aa7.35□□□□□ -1.23
LINC00458-201ENST00000423442 IRAK3Q9Y616 596 aa7.35□□□□□ -1.23
LINC00458-201ENST00000423442 ADAMTS7Q9UKP4 1686 aa7.35□□□□□ -1.23
LINC00458-201ENST00000423442 DICER1Q9UPY3 1922 aaKnown RBP7.35□□□□□ -1.23
LINC00458-201ENST00000423442 PASKQ96RG2 1323 aa7.34□□□□□ -1.23
LINC00458-201ENST00000423442 FKTNO75072 461 aa7.34□□□□□ -1.23
LINC00458-201ENST00000423442 DDNO94850 711 aaPredicted RBP7.34□□□□□ -1.23
LINC00458-201ENST00000423442 UBOX5O94941 541 aa7.34□□□□□ -1.23
LINC00458-201ENST00000423442 VIPR1P32241 457 aa7.34□□□□□ -1.23
LINC00458-201ENST00000423442 RGS19P49795 217 aa7.34□□□□□ -1.23
LINC00458-201ENST00000423442 CHMP4BP1P59074 171 aa7.34□□□□□ -1.23
LINC00458-201ENST00000423442 SNW1Q13573 536 aaKnown RBP7.34□□□□□ -1.23
LINC00458-201ENST00000423442 TAF7Q15545 349 aaPredicted RBP7.34□□□□□ -1.23
LINC00458-201ENST00000423442 IL17REQ8NFR9 667 aa7.34□□□□□ -1.23
LINC00458-201ENST00000423442 DACT3Q96B18 629 aaPredicted RBP7.34□□□□□ -1.23
LINC00458-201ENST00000423442 PLCD4Q9BRC7 762 aa7.34□□□□□ -1.23
LINC00458-201ENST00000423442 XYLT2Q9H1B5 865 aa7.34□□□□□ -1.23
LINC00458-201ENST00000423442 CNTD2Q9H8S5 307 aa7.34□□□□□ -1.23
LINC00458-201ENST00000423442 EPB41L4AQ9HCS5 686 aaPredicted RBP7.34□□□□□ -1.23
LINC00458-201ENST00000423442 TCFL5Q9UL49 500 aa7.34□□□□□ -1.23
LINC00458-201ENST00000423442 TJP1Q07157 1748 aa7.34□□□□□ -1.23
LINC00458-201ENST00000423442 NRXN2Q9P2S2 1712 aa7.33□□□□□ -1.24
LINC00458-201ENST00000423442 A0A087WZG4 1122 aa7.33□□□□□ -1.24
LINC00458-201ENST00000423442 OTOL1A6NHN0 477 aaPredicted RBP7.33□□□□□ -1.24
LINC00458-201ENST00000423442 H0YIN7 160 aa7.33□□□□□ -1.24
LINC00458-201ENST00000423442 RGS13O14921 159 aa7.33□□□□□ -1.24
LINC00458-201ENST00000423442 SERPINB2P05120 415 aa7.33□□□□□ -1.24
LINC00458-201ENST00000423442 KIR2DL1P43626 348 aaPredicted RBP7.33□□□□□ -1.24
LINC00458-201ENST00000423442 KIR2DL2P43627 348 aaPredicted RBP7.33□□□□□ -1.24
LINC00458-201ENST00000423442 AFF3P51826 1226 aaKnown RBP7.33□□□□□ -1.24
LINC00458-201ENST00000423442 KIR3DS1Q14943 382 aa7.33□□□□□ -1.24
LINC00458-201ENST00000423442 VMACQ2NL98 169 aa7.33□□□□□ -1.24
LINC00458-201ENST00000423442 ZNF790Q6PG37 636 aa7.33□□□□□ -1.24
LINC00458-201ENST00000423442 REC114Q7Z4M0 266 aa7.33□□□□□ -1.24
LINC00458-201ENST00000423442 RELL1Q8IUW5 271 aa7.33□□□□□ -1.24
LINC00458-201ENST00000423442 GOLM1Q8NBJ4 401 aa7.33□□□□□ -1.24
LINC00458-201ENST00000423442 DAGLBQ8NCG7 672 aa7.33□□□□□ -1.24
LINC00458-201ENST00000423442 PNISRQ8TF01 805 aaKnown RBP7.33□□□□□ -1.24
LINC00458-201ENST00000423442 CRTAC1Q9NQ79 661 aa7.33□□□□□ -1.24
LINC00458-201ENST00000423442 FER1L6Q2WGJ9 1857 aa7.32□□□□□ -1.24
LINC00458-201ENST00000423442 MYBBP1AQ9BQG0 1328 aaKnown RBP7.32□□□□□ -1.24
LINC00458-201ENST00000423442 MINDY4BA8MYZ0 360 aa7.32□□□□□ -1.24
LINC00458-201ENST00000423442 NPHP1O15259 732 aa7.32□□□□□ -1.24
LINC00458-201ENST00000423442 SYN1P17600 705 aa7.32□□□□□ -1.24
LINC00458-201ENST00000423442 CANXP27824 592 aaKnown RBP7.32□□□□□ -1.24
LINC00458-201ENST00000423442 PCBP3P57721 371 aaKnown RBP7.32□□□□□ -1.24
LINC00458-201ENST00000423442 DEFB115Q30KQ5 88 aa7.32□□□□□ -1.24
LINC00458-201ENST00000423442 ARSHQ5FYA8 562 aa7.32□□□□□ -1.24
LINC00458-201ENST00000423442 SNAP47Q5SQN1 464 aa7.32□□□□□ -1.24
LINC00458-201ENST00000423442 MCM10Q7L590 875 aa7.32□□□□□ -1.24
LINC00458-201ENST00000423442 TMC4Q7Z404 712 aa7.32□□□□□ -1.24
LINC00458-201ENST00000423442 LDHDQ86WU2 507 aa7.32□□□□□ -1.24
LINC00458-201ENST00000423442 DNAJC10Q8IXB1 793 aa7.32□□□□□ -1.24
LINC00458-201ENST00000423442 RTEL1Q9NZ71 1219 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms