RNA–Protein interactions for RNA: ENST00000423026.6

SNX20-203, Transcript of sorting nexin 20, humanhuman

TSL 1 (best) BASIC

Gene SNX20, Length 2,156 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-203ENST00000423026 TSG101Q99816 390 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 WDR18Q9BV38 432 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 NAA15Q9BXJ9 866 aaKnown RBP10.04□□□□□ -0.8
SNX20-203ENST00000423026 GPRC5DQ9NZD1 345 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 USP27XA6NNY8 438 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 ZBED4O75132 1171 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 IRX3P78415 501 aaPredicted RBP10.04□□□□□ -0.8
SNX20-203ENST00000423026 SETQ01105 290 aaPredicted RBP10.04□□□□□ -0.8
SNX20-203ENST00000423026 GOLGA8FQ08AF8 430 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 GOLGA8DPQ0D2H9 430 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 COASYQ13057 564 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 MTMR2Q13614 643 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 E4F1Q66K89 784 aaPredicted RBP10.04□□□□□ -0.8
SNX20-203ENST00000423026 KRT26Q7Z3Y9 468 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 GPBP1Q86WP2 473 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 CATSPER3Q86XQ3 398 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 IRF2BP1Q8IU81 584 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 CPXCR1Q8N123 301 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 CYP2W1Q8TAV3 490 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 CPLX3Q8WVH0 158 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 DNAJC19Q96DA6 116 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 WRNIP1Q96S55 665 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 DUSP9Q99956 384 aaKnown RBP10.04□□□□□ -0.8
SNX20-203ENST00000423026 POLR3CQ9BUI4 534 aaPredicted RBP10.04□□□□□ -0.8
SNX20-203ENST00000423026 SPON1Q9HCB6 807 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 MAP3K20Q9NYL2 800 aaKnown RBP10.04□□□□□ -0.8
SNX20-203ENST00000423026 ZNF112Q9UJU3 913 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 PPP2R3BQ9Y5P8 575 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 DOCK1Q14185 1865 aa10.03□□□□□ -0.8
SNX20-203ENST00000423026 DICER1Q9UPY3 1922 aaKnown RBP10.03□□□□□ -0.8
SNX20-203ENST00000423026 IGLV3-22A0A075B6J6 115 aa10.03□□□□□ -0.8
SNX20-203ENST00000423026 LGALS16A8MUM7 142 aa10.03□□□□□ -0.8
SNX20-203ENST00000423026 ALAS1P13196 640 aa10.03□□□□□ -0.8
SNX20-203ENST00000423026 MTIF2P46199 727 aaKnown RBP10.03□□□□□ -0.8
SNX20-203ENST00000423026 DNM2P50570 870 aa10.03□□□□□ -0.8
SNX20-203ENST00000423026 HSD17B4P51659 736 aa10.03□□□□□ -0.8
SNX20-203ENST00000423026 LRRC63Q05C16 580 aa10.03□□□□□ -0.8
SNX20-203ENST00000423026 RBL2Q08999 1139 aa10.03□□□□□ -0.8
SNX20-203ENST00000423026 SPP2Q13103 211 aa10.03□□□□□ -0.8
SNX20-203ENST00000423026 SUPT20HL1Q3ZLR7 823 aa10.03□□□□□ -0.8
SNX20-203ENST00000423026 CEP55Q53EZ4 464 aa10.03□□□□□ -0.8
SNX20-203ENST00000423026 FAM26FQ5R3K3 315 aa10.03□□□□□ -0.8
SNX20-203ENST00000423026 LRCH2Q5VUJ6 765 aa10.03□□□□□ -0.8
SNX20-203ENST00000423026 MYOCDQ8IZQ8 938 aa10.03□□□□□ -0.8
SNX20-203ENST00000423026 HPS3Q969F9 1004 aa10.03□□□□□ -0.8
SNX20-203ENST00000423026 SLC38A10Q9HBR0 1119 aa10.03□□□□□ -0.8
SNX20-203ENST00000423026 VAV3Q9UKW4 847 aa10.03□□□□□ -0.8
SNX20-203ENST00000423026 PPP1R9AQ9ULJ8 1098 aa10.03□□□□□ -0.8
SNX20-203ENST00000423026 PITPNM2Q9BZ72 1349 aa10.03□□□□□ -0.8
SNX20-203ENST00000423026 A0A1W2PQC6 194 aa10.02□□□□□ -0.8
SNX20-203ENST00000423026 POTEFA5A3E0 1075 aa10.02□□□□□ -0.8
SNX20-203ENST00000423026 TULP2O00295 520 aa10.02□□□□□ -0.8
SNX20-203ENST00000423026 GAS7O60861 476 aa10.02□□□□□ -0.8
SNX20-203ENST00000423026 POTEIP0CG38 1075 aa10.02□□□□□ -0.8
SNX20-203ENST00000423026 CYP11B2P19099 503 aa10.02□□□□□ -0.8
SNX20-203ENST00000423026 VCAM1P19320 739 aa10.02□□□□□ -0.8
SNX20-203ENST00000423026 SLC12A3P55017 1021 aa10.02□□□□□ -0.8
SNX20-203ENST00000423026 BACE1P56817 501 aa10.02□□□□□ -0.8
SNX20-203ENST00000423026 EHHADHQ08426 723 aa10.02□□□□□ -0.8
SNX20-203ENST00000423026 HERC4Q5GLZ8 1057 aaPredicted RBP10.02□□□□□ -0.8
SNX20-203ENST00000423026 FOXR2Q6PJQ5 311 aa10.02□□□□□ -0.8
SNX20-203ENST00000423026 POTEGQ6S5H5 508 aa10.02□□□□□ -0.8
SNX20-203ENST00000423026 POTEEQ6S8J3 1075 aa10.02□□□□□ -0.8
SNX20-203ENST00000423026 NYAP1Q6ZVC0 841 aa10.02□□□□□ -0.8
SNX20-203ENST00000423026 MB21D1Q8N884 522 aa10.02□□□□□ -0.8
SNX20-203ENST00000423026 SYT2Q8N9I0 419 aaPredicted RBP10.02□□□□□ -0.8
SNX20-203ENST00000423026 ZNF280CQ8ND82 737 aa10.02□□□□□ -0.8
SNX20-203ENST00000423026 ZNF592Q92610 1267 aa10.02□□□□□ -0.8
SNX20-203ENST00000423026 SLC5A5Q92911 643 aa10.02□□□□□ -0.8
SNX20-203ENST00000423026 PPP1R13BQ96KQ4 1090 aa10.02□□□□□ -0.8
SNX20-203ENST00000423026 CNOT6LQ96LI5 555 aaKnown RBP10.02□□□□□ -0.8
SNX20-203ENST00000423026 EIF2AK1Q9BQI3 630 aaKnown RBP10.02□□□□□ -0.8
SNX20-203ENST00000423026 TUBGCP2Q9BSJ2 902 aa10.02□□□□□ -0.8
SNX20-203ENST00000423026 ZNF577Q9BSK1 485 aa10.02□□□□□ -0.8
SNX20-203ENST00000423026 WDR11Q9BZH6 1224 aa10.02□□□□□ -0.8
SNX20-203ENST00000423026 SEMA6BQ9H3T3 888 aa10.02□□□□□ -0.8
SNX20-203ENST00000423026 RPAP3Q9H6T3 665 aaPredicted RBP10.02□□□□□ -0.8
SNX20-203ENST00000423026 TUFT1Q9NNX1 390 aa10.02□□□□□ -0.8
SNX20-203ENST00000423026 EMILIN3Q9NT22 766 aa10.02□□□□□ -0.8
SNX20-203ENST00000423026 ZNF536O15090 1300 aa10.02□□□□□ -0.8
SNX20-203ENST00000423026 GOLGA6L9A6NEM1 432 aa10.02□□□□□ -0.81
SNX20-203ENST00000423026 C19orf81C9J6K1 198 aa10.02□□□□□ -0.81
SNX20-203ENST00000423026 MEIS1O00470 390 aa10.02□□□□□ -0.81
SNX20-203ENST00000423026 SPATA31C1P0DKV0 1188 aa10.02□□□□□ -0.81
SNX20-203ENST00000423026 UBXN2AP68543 259 aa10.02□□□□□ -0.81
SNX20-203ENST00000423026 OTOP1Q7RTM1 612 aa10.02□□□□□ -0.81
SNX20-203ENST00000423026 TMEM139Q8IV31 216 aa10.02□□□□□ -0.81
SNX20-203ENST00000423026 TRPM4Q8TD43 1214 aa10.02□□□□□ -0.81
SNX20-203ENST00000423026 RAVER2Q9HCJ3 691 aaKnown RBP10.02□□□□□ -0.81
SNX20-203ENST00000423026 GGA3Q9NZ52 723 aa10.02□□□□□ -0.81
SNX20-203ENST00000423026 MFAP3LO75121 409 aa10.01□□□□□ -0.81
SNX20-203ENST00000423026 PSMD10O75832 226 aa10.01□□□□□ -0.81
SNX20-203ENST00000423026 PTPRAP18433 802 aa10.01□□□□□ -0.81
SNX20-203ENST00000423026 MUTP22033 750 aa10.01□□□□□ -0.81
SNX20-203ENST00000423026 CASP14P31944 242 aa10.01□□□□□ -0.81
SNX20-203ENST00000423026 CYP4A11Q02928 519 aa10.01□□□□□ -0.81
SNX20-203ENST00000423026 PABPC4Q13310 644 aaKnown RBP eCLIP10.01□□□□□ -0.81
SNX20-203ENST00000423026 PPP2R5CQ13362 524 aa10.01□□□□□ -0.81
SNX20-203ENST00000423026 TSR1Q2NL82 804 aaKnown RBP10.01□□□□□ -0.81
SNX20-203ENST00000423026 FKBP15Q5T1M5 1219 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms