RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 POLR2DO15514 142 aaKnown RBP16.05■□□□□ 0.16
SHMT1P1-201ENST00000419974 DHX15O43143 795 aaKnown RBP16.05■□□□□ 0.16
SHMT1P1-201ENST00000419974 ACTN4O43707 911 aaKnown RBP16.05■□□□□ 0.16
SHMT1P1-201ENST00000419974 MARCH6O60337 910 aa16.05■□□□□ 0.16
SHMT1P1-201ENST00000419974 RGS20O76081 388 aa16.05■□□□□ 0.16
SHMT1P1-201ENST00000419974 HOXC6P09630 235 aa16.05■□□□□ 0.16
SHMT1P1-201ENST00000419974 MDM2Q00987 491 aaPredicted RBP16.05■□□□□ 0.16
SHMT1P1-201ENST00000419974 SP3Q02447 781 aa16.05■□□□□ 0.16
SHMT1P1-201ENST00000419974 LONRF3Q496Y0 759 aa16.05■□□□□ 0.16
SHMT1P1-201ENST00000419974 KRT79Q5XKE5 535 aa16.05■□□□□ 0.16
SHMT1P1-201ENST00000419974 GPR142Q7Z601 462 aa16.05■□□□□ 0.16
SHMT1P1-201ENST00000419974 PLEKHH3Q7Z736 793 aa16.05■□□□□ 0.16
SHMT1P1-201ENST00000419974 CABP7Q86V35 215 aa16.05■□□□□ 0.16
SHMT1P1-201ENST00000419974 RDM1Q8NG50 284 aa16.05■□□□□ 0.16
SHMT1P1-201ENST00000419974 SPATA20Q8TB22 786 aa16.05■□□□□ 0.16
SHMT1P1-201ENST00000419974 ZNF577Q9BSK1 485 aa16.05■□□□□ 0.16
SHMT1P1-201ENST00000419974 NT5C3AQ9H0P0 336 aa16.05■□□□□ 0.16
SHMT1P1-201ENST00000419974 KDM3AQ9Y4C1 1321 aa16.05■□□□□ 0.16
SHMT1P1-201ENST00000419974 ARP10275 920 aa16.04■□□□□ 0.16
SHMT1P1-201ENST00000419974 RPA1P27694 616 aa16.04■□□□□ 0.16
SHMT1P1-201ENST00000419974 CNTN2Q02246 1040 aa16.04■□□□□ 0.16
SHMT1P1-201ENST00000419974 SPECC1Q5M775 1068 aa16.04■□□□□ 0.16
SHMT1P1-201ENST00000419974 NT5DC1Q5TFE4 455 aa16.04■□□□□ 0.16
SHMT1P1-201ENST00000419974 HAUS3Q68CZ6 603 aa16.04■□□□□ 0.16
SHMT1P1-201ENST00000419974 ERMNQ8TAM6 284 aa16.04■□□□□ 0.16
SHMT1P1-201ENST00000419974 NEK9Q8TD19 979 aa16.04■□□□□ 0.16
SHMT1P1-201ENST00000419974 POLR3CQ9BUI4 534 aaPredicted RBP16.04■□□□□ 0.16
SHMT1P1-201ENST00000419974 TNMDQ9H2S6 317 aa16.04■□□□□ 0.16
SHMT1P1-201ENST00000419974 STK17AQ9UEE5 414 aa16.04■□□□□ 0.16
SHMT1P1-201ENST00000419974 IVNS1ABPQ9Y6Y0 642 aa16.04■□□□□ 0.16
SHMT1P1-201ENST00000419974 A0A087X0B3 334 aa16.03■□□□□ 0.16
SHMT1P1-201ENST00000419974 ADORA2AP29274 412 aa16.03■□□□□ 0.16
SHMT1P1-201ENST00000419974 UBXN2AP68543 259 aa16.03■□□□□ 0.16
SHMT1P1-201ENST00000419974 ARHGEF6Q15052 776 aa16.03■□□□□ 0.16
SHMT1P1-201ENST00000419974 TMEM119Q4V9L6 283 aa16.03■□□□□ 0.16
SHMT1P1-201ENST00000419974 NAALADL2Q58DX5 795 aa16.03■□□□□ 0.16
SHMT1P1-201ENST00000419974 MORN1Q5T089 497 aa16.03■□□□□ 0.16
SHMT1P1-201ENST00000419974 LRCH2Q5VUJ6 765 aa16.03■□□□□ 0.16
SHMT1P1-201ENST00000419974 PDXDC2PQ6P474 469 aa16.03■□□□□ 0.16
SHMT1P1-201ENST00000419974 CNNM4Q6P4Q7 775 aa16.03■□□□□ 0.16
SHMT1P1-201ENST00000419974 GIMAP8Q8ND71 665 aaPredicted RBP16.03■□□□□ 0.16
SHMT1P1-201ENST00000419974 CNNM3Q8NE01 707 aa16.03■□□□□ 0.16
SHMT1P1-201ENST00000419974 USP6NLQ92738 828 aa16.03■□□□□ 0.16
SHMT1P1-201ENST00000419974 CALML4Q96GE6 196 aa16.03■□□□□ 0.16
SHMT1P1-201ENST00000419974 PURBQ96QR8 312 aaKnown RBP16.03■□□□□ 0.16
SHMT1P1-201ENST00000419974 HSD17B14Q9BPX1 270 aa16.03■□□□□ 0.16
SHMT1P1-201ENST00000419974 SDF4Q9BRK5 362 aa16.03■□□□□ 0.16
SHMT1P1-201ENST00000419974 KBTBD4Q9NVX7 518 aa16.03■□□□□ 0.16
SHMT1P1-201ENST00000419974 SLC5A4Q9NY91 659 aa16.03■□□□□ 0.16
SHMT1P1-201ENST00000419974 LCTP09848 1927 aa16.03■□□□□ 0.16
SHMT1P1-201ENST00000419974 GAS7O60861 476 aa16.02■□□□□ 0.16
SHMT1P1-201ENST00000419974 IGHA2P01877 340 aa16.02■□□□□ 0.16
SHMT1P1-201ENST00000419974 MYCLP12524 364 aaPredicted RBP16.02■□□□□ 0.16
SHMT1P1-201ENST00000419974 SFNP31947 248 aa16.02■□□□□ 0.16
SHMT1P1-201ENST00000419974 KRT76Q01546 638 aa16.02■□□□□ 0.16
SHMT1P1-201ENST00000419974 EPHA7Q15375 998 aa16.02■□□□□ 0.16
SHMT1P1-201ENST00000419974 ZNF746Q6NUN9 644 aaPredicted RBP16.02■□□□□ 0.16
SHMT1P1-201ENST00000419974 FUCA2Q9BTY2 467 aa16.02■□□□□ 0.16
SHMT1P1-201ENST00000419974 TEKT3Q9BXF9 490 aa16.02■□□□□ 0.16
SHMT1P1-201ENST00000419974 TUFT1Q9NNX1 390 aa16.02■□□□□ 0.16
SHMT1P1-201ENST00000419974 TUBE1Q9UJT0 475 aa16.02■□□□□ 0.16
SHMT1P1-201ENST00000419974 RBM47A0AV96 593 aaKnown RBP16.01■□□□□ 0.15
SHMT1P1-201ENST00000419974 POTEMA6NI47 508 aa16.01■□□□□ 0.15
SHMT1P1-201ENST00000419974 COBLO75128 1261 aa16.01■□□□□ 0.15
SHMT1P1-201ENST00000419974 CAVIN2O95810 425 aa16.01■□□□□ 0.15
SHMT1P1-201ENST00000419974 KCNA2P16389 499 aa16.01■□□□□ 0.15
SHMT1P1-201ENST00000419974 MLLT1Q03111 559 aaPredicted RBP16.01■□□□□ 0.15
SHMT1P1-201ENST00000419974 PDE4DQ08499 809 aa16.01■□□□□ 0.15
SHMT1P1-201ENST00000419974 ITGB3BPQ13352 177 aaPredicted RBP16.01■□□□□ 0.15
SHMT1P1-201ENST00000419974 RRAGBQ5VZM2 374 aa16.01■□□□□ 0.15
SHMT1P1-201ENST00000419974 LRSAM1Q6UWE0 723 aa16.01■□□□□ 0.15
SHMT1P1-201ENST00000419974 SMAP1Q8IYB5 467 aaPredicted RBP16.01■□□□□ 0.15
SHMT1P1-201ENST00000419974 CEP57L1Q8IYX8 460 aa16.01■□□□□ 0.15
SHMT1P1-201ENST00000419974 SOCS4Q8WXH5 440 aa16.01■□□□□ 0.15
SHMT1P1-201ENST00000419974 KIAA1468Q9P260 1216 aa16.01■□□□□ 0.15
SHMT1P1-201ENST00000419974 CPA4Q9UI42 421 aa16.01■□□□□ 0.15
SHMT1P1-201ENST00000419974 TRIM17Q9Y577 477 aa16.01■□□□□ 0.15
SHMT1P1-201ENST00000419974 SYNGAP1Q96PV0 1343 aa16.01■□□□□ 0.15
SHMT1P1-201ENST00000419974 PP2D1A8MPX8 630 aa16■□□□□ 0.15
SHMT1P1-201ENST00000419974 LYPLA2O95372 231 aa16■□□□□ 0.15
SHMT1P1-201ENST00000419974 PGK2P07205 417 aa16■□□□□ 0.15
SHMT1P1-201ENST00000419974 SPATA31C1P0DKV0 1188 aa16■□□□□ 0.15
SHMT1P1-201ENST00000419974 CDC25AP30304 524 aa16■□□□□ 0.15
SHMT1P1-201ENST00000419974 SARSP49591 514 aaKnown RBP16■□□□□ 0.15
SHMT1P1-201ENST00000419974 GRB10Q13322 594 aa16■□□□□ 0.15
SHMT1P1-201ENST00000419974 KARSQ15046 597 aaKnown RBP16■□□□□ 0.15
SHMT1P1-201ENST00000419974 SNX29Q8TEQ0 813 aa16■□□□□ 0.15
SHMT1P1-201ENST00000419974 PNMA5Q96PV4 448 aa16■□□□□ 0.15
SHMT1P1-201ENST00000419974 LRRC27Q9C0I9 530 aa16■□□□□ 0.15
SHMT1P1-201ENST00000419974 SERTAD1Q9UHV2 236 aa16■□□□□ 0.15
SHMT1P1-201ENST00000419974 ATP9AO75110 1047 aa15.99■□□□□ 0.15
SHMT1P1-201ENST00000419974 XRCC6P12956 609 aaKnown RBP eCLIP15.99■□□□□ 0.15
SHMT1P1-201ENST00000419974 XRCC5P13010 732 aaKnown RBP15.99■□□□□ 0.15
SHMT1P1-201ENST00000419974 STAT6P42226 847 aa15.99■□□□□ 0.15
SHMT1P1-201ENST00000419974 JAK3P52333 1124 aa15.99■□□□□ 0.15
SHMT1P1-201ENST00000419974 AMPD3Q01432 767 aa15.99■□□□□ 0.15
SHMT1P1-201ENST00000419974 MAP2K5Q13163 448 aa15.99■□□□□ 0.15
SHMT1P1-201ENST00000419974 POSTNQ15063 836 aa15.99■□□□□ 0.15
SHMT1P1-201ENST00000419974 CATSPER3Q86XQ3 398 aa15.99■□□□□ 0.15
SHMT1P1-201ENST00000419974 TRIML1Q8N9V2 468 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms