RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 OSMRQ99650 979 aa8.26□□□□□ -1.09
HMGN1-205ENST00000419378 ZKSCAN3Q9BRR0 538 aa8.26□□□□□ -1.09
HMGN1-205ENST00000419378 EPB41L4AQ9HCS5 686 aaPredicted RBP8.26□□□□□ -1.09
HMGN1-205ENST00000419378 CABP5Q9NP86 173 aa8.26□□□□□ -1.09
HMGN1-205ENST00000419378 TMOD4Q9NZQ9 345 aa8.26□□□□□ -1.09
HMGN1-205ENST00000419378 SWAP70Q9UH65 585 aa8.26□□□□□ -1.09
HMGN1-205ENST00000419378 PTPN22Q9Y2R2 807 aa8.26□□□□□ -1.09
HMGN1-205ENST00000419378 ROBO3Q96MS0 1386 aa8.25□□□□□ -1.09
HMGN1-205ENST00000419378 C19orf81C9J6K1 198 aa8.25□□□□□ -1.09
HMGN1-205ENST00000419378 MPHOSPH10O00566 681 aaKnown RBP8.25□□□□□ -1.09
HMGN1-205ENST00000419378 AKR1B1P15121 316 aa8.25□□□□□ -1.09
HMGN1-205ENST00000419378 GNAT2P19087 354 aa8.25□□□□□ -1.09
HMGN1-205ENST00000419378 CDK8P49336 464 aa8.25□□□□□ -1.09
HMGN1-205ENST00000419378 SEPT2Q15019 361 aa8.25□□□□□ -1.09
HMGN1-205ENST00000419378 ARHGEF6Q15052 776 aa8.25□□□□□ -1.09
HMGN1-205ENST00000419378 ZYXQ15942 572 aaKnown RBP8.25□□□□□ -1.09
HMGN1-205ENST00000419378 SBK1Q52WX2 424 aa8.25□□□□□ -1.09
HMGN1-205ENST00000419378 GIMAP6Q6P9H5 292 aa8.25□□□□□ -1.09
HMGN1-205ENST00000419378 TMEM179Q6ZVK1 233 aa8.25□□□□□ -1.09
HMGN1-205ENST00000419378 FCHSD1Q86WN1 690 aa8.25□□□□□ -1.09
HMGN1-205ENST00000419378 ACER1Q8TDN7 264 aa8.25□□□□□ -1.09
HMGN1-205ENST00000419378 TNFRSF25Q93038 417 aa8.25□□□□□ -1.09
HMGN1-205ENST00000419378 C12orf42Q96LP6 360 aa8.25□□□□□ -1.09
HMGN1-205ENST00000419378 CNTNAP3BQ96NU0 1288 aa8.25□□□□□ -1.09
HMGN1-205ENST00000419378 FEZ1Q99689 392 aa8.25□□□□□ -1.09
HMGN1-205ENST00000419378 CNTNAP3Q9BZ76 1288 aa8.25□□□□□ -1.09
HMGN1-205ENST00000419378 IGSF5Q9NSI5 407 aa8.25□□□□□ -1.09
HMGN1-205ENST00000419378 A0A1W2PRG0 241 aa8.24□□□□□ -1.09
HMGN1-205ENST00000419378 APPP05067 770 aa8.24□□□□□ -1.09
HMGN1-205ENST00000419378 CTSHP09668 335 aa8.24□□□□□ -1.09
HMGN1-205ENST00000419378 CPB1P15086 417 aa8.24□□□□□ -1.09
HMGN1-205ENST00000419378 EIF2AK2P19525 551 aaKnown RBP8.24□□□□□ -1.09
HMGN1-205ENST00000419378 HOXA7P31268 230 aaPredicted RBP8.24□□□□□ -1.09
HMGN1-205ENST00000419378 ADH7P40394 386 aa8.24□□□□□ -1.09
HMGN1-205ENST00000419378 PSMC4P43686 418 aa8.24□□□□□ -1.09
HMGN1-205ENST00000419378 TDO2P48775 406 aa8.24□□□□□ -1.09
HMGN1-205ENST00000419378 USP14P54578 494 aa8.24□□□□□ -1.09
HMGN1-205ENST00000419378 FCGRTP55899 365 aa8.24□□□□□ -1.09
HMGN1-205ENST00000419378 SOX10P56693 466 aa8.24□□□□□ -1.09
HMGN1-205ENST00000419378 IRX3P78415 501 aaPredicted RBP8.24□□□□□ -1.09
HMGN1-205ENST00000419378 KRT76Q01546 638 aa8.24□□□□□ -1.09
HMGN1-205ENST00000419378 PCSK7Q16549 785 aa8.24□□□□□ -1.09
HMGN1-205ENST00000419378 FAM110CQ1W6H9 321 aa8.24□□□□□ -1.09
HMGN1-205ENST00000419378 CCDC129Q6ZRS4 1044 aa8.24□□□□□ -1.09
HMGN1-205ENST00000419378 CLEC10AQ8IUN9 316 aa8.24□□□□□ -1.09
HMGN1-205ENST00000419378 TMEM87AQ8NBN3 555 aa8.24□□□□□ -1.09
HMGN1-205ENST00000419378 IRF7Q92985 503 aa8.24□□□□□ -1.09
HMGN1-205ENST00000419378 HHIPQ96QV1 700 aa8.24□□□□□ -1.09
HMGN1-205ENST00000419378 KIAA1683Q9H0B3 1180 aa8.24□□□□□ -1.09
HMGN1-205ENST00000419378 ASCC2Q9H1I8 757 aaPredicted RBP8.24□□□□□ -1.09
HMGN1-205ENST00000419378 LIN7BQ9HAP6 207 aa8.24□□□□□ -1.09
HMGN1-205ENST00000419378 DZANK1Q9NVP4 752 aa8.24□□□□□ -1.09
HMGN1-205ENST00000419378 SLC6A14Q9UN76 642 aa8.24□□□□□ -1.09
HMGN1-205ENST00000419378 PTCH2Q9Y6C5 1203 aa8.24□□□□□ -1.09
HMGN1-205ENST00000419378 GREB1LQ9C091 1923 aaPredicted RBP8.24□□□□□ -1.09
HMGN1-205ENST00000419378 MGAMO43451 1857 aa8.23□□□□□ -1.09
HMGN1-205ENST00000419378 A0A0D9SFI3 127 aa8.23□□□□□ -1.09
HMGN1-205ENST00000419378 ADARB2-AS1A8MUL3 147 aa8.23□□□□□ -1.09
HMGN1-205ENST00000419378 MINDY4BA8MYZ0 360 aa8.23□□□□□ -1.09
HMGN1-205ENST00000419378 FOXP2O15409 715 aa8.23□□□□□ -1.09
HMGN1-205ENST00000419378 GHRHP01286 108 aa8.23□□□□□ -1.09
HMGN1-205ENST00000419378 USP17L7P0C7H9 530 aa8.23□□□□□ -1.09
HMGN1-205ENST00000419378 TCF3P15923 654 aa8.23□□□□□ -1.09
HMGN1-205ENST00000419378 VCAM1P19320 739 aa8.23□□□□□ -1.09
HMGN1-205ENST00000419378 GCLCP48506 637 aaPredicted RBP8.23□□□□□ -1.09
HMGN1-205ENST00000419378 PRMT2P55345 433 aa8.23□□□□□ -1.09
HMGN1-205ENST00000419378 HERVK_113P62684 666 aa8.23□□□□□ -1.09
HMGN1-205ENST00000419378 ATP11AP98196 1134 aa8.23□□□□□ -1.09
HMGN1-205ENST00000419378 ICA1Q05084 483 aa8.23□□□□□ -1.09
HMGN1-205ENST00000419378 FAM35AQ86V20 835 aa8.23□□□□□ -1.09
HMGN1-205ENST00000419378 IFNL3Q8IZI9 196 aa8.23□□□□□ -1.09
HMGN1-205ENST00000419378 ANKRD13CQ8N6S4 541 aa8.23□□□□□ -1.09
HMGN1-205ENST00000419378 GLIS3Q8NEA6 775 aa8.23□□□□□ -1.09
HMGN1-205ENST00000419378 ARMC5Q96C12 935 aa8.23□□□□□ -1.09
HMGN1-205ENST00000419378 CCDC17Q96LX7 622 aa8.23□□□□□ -1.09
HMGN1-205ENST00000419378 FAM227BQ96M60 508 aa8.23□□□□□ -1.09
HMGN1-205ENST00000419378 TCF12Q99081 682 aa8.23□□□□□ -1.09
HMGN1-205ENST00000419378 NACAP1Q9BZK3 213 aa8.23□□□□□ -1.09
HMGN1-205ENST00000419378 NAPBQ9H115 298 aa8.23□□□□□ -1.09
HMGN1-205ENST00000419378 RASSF4Q9H2L5 321 aa8.23□□□□□ -1.09
HMGN1-205ENST00000419378 HELLSQ9NRZ9 838 aa8.23□□□□□ -1.09
HMGN1-205ENST00000419378 FAM8A1Q9UBU6 413 aa8.23□□□□□ -1.09
HMGN1-205ENST00000419378 SRRDQ9UH36 339 aa8.23□□□□□ -1.09
HMGN1-205ENST00000419378 MYPNQ86TC9 1320 aa8.23□□□□□ -1.09
HMGN1-205ENST00000419378 TNRC18O15417 2968 aaPredicted RBP8.22□□□□□ -1.09
HMGN1-205ENST00000419378 TNPO2O14787 897 aaKnown RBP8.22□□□□□ -1.09
HMGN1-205ENST00000419378 HOXD10P28358 340 aa8.22□□□□□ -1.09
HMGN1-205ENST00000419378 PRKCZQ05513 592 aa8.22□□□□□ -1.09
HMGN1-205ENST00000419378 NMIQ13287 307 aaPredicted RBP8.22□□□□□ -1.09
HMGN1-205ENST00000419378 SLC9C1Q4G0N8 1177 aa8.22□□□□□ -1.09
HMGN1-205ENST00000419378 VPS53Q5VIR6 699 aa8.22□□□□□ -1.09
HMGN1-205ENST00000419378 TICAM2Q86XR7 235 aa8.22□□□□□ -1.09
HMGN1-205ENST00000419378 SIAH1Q8IUQ4 282 aa8.22□□□□□ -1.09
HMGN1-205ENST00000419378 STK11IPQ8N1F8 1099 aa8.22□□□□□ -1.09
HMGN1-205ENST00000419378 RILPL2Q969X0 211 aa8.22□□□□□ -1.09
HMGN1-205ENST00000419378 CRELD1Q96HD1 420 aa8.22□□□□□ -1.09
HMGN1-205ENST00000419378 P2RX7Q99572 595 aaKnown RBP8.22□□□□□ -1.09
HMGN1-205ENST00000419378 MDFIQ99750 246 aa8.22□□□□□ -1.09
HMGN1-205ENST00000419378 OXCT2Q9BYC2 517 aaPredicted RBP8.22□□□□□ -1.09
HMGN1-205ENST00000419378 PBX4Q9BYU1 374 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms