RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 TRADDQ15628 312 aa16.72■□□□□ 0.27
SEMA3B-203ENST00000419007 ALS2CLQ60I27 953 aa16.72■□□□□ 0.27
SEMA3B-203ENST00000419007 ZNF804AQ7Z570 1209 aa16.72■□□□□ 0.27
SEMA3B-203ENST00000419007 CERS3Q8IU89 383 aa16.72■□□□□ 0.27
SEMA3B-203ENST00000419007 PACSIN1Q9BY11 444 aa16.72■□□□□ 0.27
SEMA3B-203ENST00000419007 FGFBP2Q9BYJ0 223 aa16.72■□□□□ 0.27
SEMA3B-203ENST00000419007 TLR2O60603 784 aa16.71■□□□□ 0.27
SEMA3B-203ENST00000419007 KRT18P05783 430 aaKnown RBP16.71■□□□□ 0.27
SEMA3B-203ENST00000419007 KLHL30Q0D2K2 578 aa16.71■□□□□ 0.27
SEMA3B-203ENST00000419007 GBP6Q6ZN66 633 aa16.71■□□□□ 0.27
SEMA3B-203ENST00000419007 DNAAF5Q86Y56 855 aa16.71■□□□□ 0.27
SEMA3B-203ENST00000419007 GOLPH3Q9H4A6 298 aa16.71■□□□□ 0.27
SEMA3B-203ENST00000419007 CCDC88AQ3V6T2 1871 aa16.71■□□□□ 0.27
SEMA3B-203ENST00000419007 A0A087WUV0 522 aaPredicted RBP16.71■□□□□ 0.27
SEMA3B-203ENST00000419007 NPHP3-ACAD11A0A0J9YXS1 232 aa16.71■□□□□ 0.27
SEMA3B-203ENST00000419007 FXR2P51116 673 aaKnown RBP eCLIP16.71■□□□□ 0.27
SEMA3B-203ENST00000419007 HERC4Q5GLZ8 1057 aaPredicted RBP16.71■□□□□ 0.27
SEMA3B-203ENST00000419007 C16orf86Q6ZW13 317 aa16.71■□□□□ 0.27
SEMA3B-203ENST00000419007 MAATS1Q7Z4T9 603 aa16.71■□□□□ 0.27
SEMA3B-203ENST00000419007 RTFDC1Q9BY42 306 aaPredicted RBP16.71■□□□□ 0.27
SEMA3B-203ENST00000419007 FAM107BQ9H098 131 aa16.71■□□□□ 0.27
SEMA3B-203ENST00000419007 RIC8AQ9NPQ8 531 aa16.71■□□□□ 0.27
SEMA3B-203ENST00000419007 A0A087X0T9 212 aa16.71■□□□□ 0.26
SEMA3B-203ENST00000419007 SSU72P8A0A1W2PR75 194 aa16.71■□□□□ 0.26
SEMA3B-203ENST00000419007 PJA2O43164 708 aa16.71■□□□□ 0.26
SEMA3B-203ENST00000419007 ERLIN2O94905 339 aa16.71■□□□□ 0.26
SEMA3B-203ENST00000419007 SERPING1P05155 500 aa16.71■□□□□ 0.26
SEMA3B-203ENST00000419007 FAM228BP0C875 321 aa16.71■□□□□ 0.26
SEMA3B-203ENST00000419007 PAK2Q13177 524 aa16.71■□□□□ 0.26
SEMA3B-203ENST00000419007 ASTE1Q2TB18 679 aaPredicted RBP16.71■□□□□ 0.26
SEMA3B-203ENST00000419007 COBLL1Q53SF7 1204 aa16.71■□□□□ 0.26
SEMA3B-203ENST00000419007 ZNF572Q7Z3I7 529 aaPredicted RBP16.71■□□□□ 0.26
SEMA3B-203ENST00000419007 PROCA1Q8NCQ7 364 aaPredicted RBP16.71■□□□□ 0.26
SEMA3B-203ENST00000419007 SH3GL2Q99962 352 aa16.71■□□□□ 0.26
SEMA3B-203ENST00000419007 CEP72Q9P209 647 aa16.71■□□□□ 0.26
SEMA3B-203ENST00000419007 DDX25Q9UHL0 483 aaKnown RBP16.71■□□□□ 0.26
SEMA3B-203ENST00000419007 ROBO3Q96MS0 1386 aa16.7■□□□□ 0.26
SEMA3B-203ENST00000419007 FAM170AA1A519 330 aa16.7■□□□□ 0.26
SEMA3B-203ENST00000419007 E9PMD0 336 aa16.7■□□□□ 0.26
SEMA3B-203ENST00000419007 PPP4CP60510 307 aa16.7■□□□□ 0.26
SEMA3B-203ENST00000419007 RNF10Q8N5U6 811 aaKnown RBP16.7■□□□□ 0.26
SEMA3B-203ENST00000419007 NARFQ9UHQ1 456 aa16.7■□□□□ 0.26
SEMA3B-203ENST00000419007 GRIN2DO15399 1336 aa16.7■□□□□ 0.26
SEMA3B-203ENST00000419007 LAMB2P55268 1798 aa16.7■□□□□ 0.26
SEMA3B-203ENST00000419007 PDHBP11177 359 aa16.7■□□□□ 0.26
SEMA3B-203ENST00000419007 SLC16A2P36021 539 aa16.7■□□□□ 0.26
SEMA3B-203ENST00000419007 TSKSQ9UJT2 592 aa16.7■□□□□ 0.26
SEMA3B-203ENST00000419007 PCDHA12Q9UN75 941 aa16.7■□□□□ 0.26
SEMA3B-203ENST00000419007 KIAA1024Q9UPX6 916 aa16.7■□□□□ 0.26
SEMA3B-203ENST00000419007 ATP6V0A2Q9Y487 856 aa16.7■□□□□ 0.26
SEMA3B-203ENST00000419007 NOL4O94818 638 aa16.69■□□□□ 0.26
SEMA3B-203ENST00000419007 TM4SF1P30408 202 aa16.69■□□□□ 0.26
SEMA3B-203ENST00000419007 GTF2A1P52655 376 aaPredicted RBP16.69■□□□□ 0.26
SEMA3B-203ENST00000419007 GUCY1A3Q02108 690 aa16.69■□□□□ 0.26
SEMA3B-203ENST00000419007 TAF4BQ92750 862 aa16.69■□□□□ 0.26
SEMA3B-203ENST00000419007 LRRC27Q9C0I9 530 aa16.69■□□□□ 0.26
SEMA3B-203ENST00000419007 KCNK3O14649 394 aa16.69■□□□□ 0.26
SEMA3B-203ENST00000419007 CAVIN3Q969G5 261 aa16.69■□□□□ 0.26
SEMA3B-203ENST00000419007 HPDP32754 393 aaPredicted RBP16.69■□□□□ 0.26
SEMA3B-203ENST00000419007 UFL1O94874 794 aa16.68■□□□□ 0.26
SEMA3B-203ENST00000419007 PSMD2Q13200 908 aa16.68■□□□□ 0.26
SEMA3B-203ENST00000419007 PDIA5Q14554 519 aa16.68■□□□□ 0.26
SEMA3B-203ENST00000419007 ICE2Q659A1 982 aa16.68■□□□□ 0.26
SEMA3B-203ENST00000419007 RUBCNQ92622 972 aa16.68■□□□□ 0.26
SEMA3B-203ENST00000419007 ZNF233A6NK53 670 aa16.68■□□□□ 0.26
SEMA3B-203ENST00000419007 F8W031 263 aaPredicted RBP16.68■□□□□ 0.26
SEMA3B-203ENST00000419007 ABCB11O95342 1321 aa16.68■□□□□ 0.26
SEMA3B-203ENST00000419007 INPP5BP32019 993 aa16.68■□□□□ 0.26
SEMA3B-203ENST00000419007 ADAM9Q13443 819 aa16.68■□□□□ 0.26
SEMA3B-203ENST00000419007 NAB2Q15742 525 aa16.68■□□□□ 0.26
SEMA3B-203ENST00000419007 ASIC2Q16515 512 aa16.68■□□□□ 0.26
SEMA3B-203ENST00000419007 GLE1Q53GS7 698 aaKnown RBP16.68■□□□□ 0.26
SEMA3B-203ENST00000419007 MFSD14BQ5SR56 506 aa16.68■□□□□ 0.26
SEMA3B-203ENST00000419007 PROM2Q8N271 834 aa16.68■□□□□ 0.26
SEMA3B-203ENST00000419007 SNED1Q8TER0 1413 aa16.68■□□□□ 0.26
SEMA3B-203ENST00000419007 CASKIN2Q8WXE0 1202 aa16.68■□□□□ 0.26
SEMA3B-203ENST00000419007 DNAJC19Q96DA6 116 aa16.68■□□□□ 0.26
SEMA3B-203ENST00000419007 RNPC3Q96LT9 517 aaKnown RBP16.68■□□□□ 0.26
SEMA3B-203ENST00000419007 RREB1Q92766 1687 aa16.68■□□□□ 0.26
SEMA3B-203ENST00000419007 EDIL3O43854 480 aa16.67■□□□□ 0.26
SEMA3B-203ENST00000419007 ACTN1P12814 892 aa16.67■□□□□ 0.26
SEMA3B-203ENST00000419007 SLC18A3Q16572 532 aa16.67■□□□□ 0.26
SEMA3B-203ENST00000419007 TTBK2Q6IQ55 1244 aa16.67■□□□□ 0.26
SEMA3B-203ENST00000419007 DPP8Q6V1X1 898 aaPredicted RBP16.67■□□□□ 0.26
SEMA3B-203ENST00000419007 GPBP1Q86WP2 473 aa16.67■□□□□ 0.26
SEMA3B-203ENST00000419007 SPAG5Q96R06 1193 aa16.67■□□□□ 0.26
SEMA3B-203ENST00000419007 RIOX1Q9H6W3 641 aa16.67■□□□□ 0.26
SEMA3B-203ENST00000419007 POTEB3A0JP26 581 aa16.67■□□□□ 0.26
SEMA3B-203ENST00000419007 POTECB2RU33 542 aa16.67■□□□□ 0.26
SEMA3B-203ENST00000419007 NT5C2P49902 561 aa16.67■□□□□ 0.26
SEMA3B-203ENST00000419007 POTEBQ6S5H4 581 aa16.67■□□□□ 0.26
SEMA3B-203ENST00000419007 CCDC65Q8IXS2 484 aa16.67■□□□□ 0.26
SEMA3B-203ENST00000419007 NUCKS1Q9H1E3 243 aaKnown RBP16.67■□□□□ 0.26
SEMA3B-203ENST00000419007 LEMD3Q9Y2U8 911 aa16.67■□□□□ 0.26
SEMA3B-203ENST00000419007 GOLGB1Q14789 3259 aaKnown RBP16.67■□□□□ 0.26
SEMA3B-203ENST00000419007 ESYT2A0FGR8 921 aa16.67■□□□□ 0.26
SEMA3B-203ENST00000419007 TMCO5BA8MYB1 307 aa16.67■□□□□ 0.26
SEMA3B-203ENST00000419007 H0YHG0 523 aa16.67■□□□□ 0.26
SEMA3B-203ENST00000419007 RAD51CO43502 376 aa16.67■□□□□ 0.26
SEMA3B-203ENST00000419007 CEP104O60308 925 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms