RNA–Protein interactions for RNA: ENST00000418646.5

GPCPD1-202, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 4,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-202ENST00000418646 MAGEA9P43362 315 aa4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 KIF11P52732 1056 aa4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 KRT83P78385 493 aa4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 APBA1Q02410 837 aa4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 NFIXQ14938 502 aa4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 ZSCAN26Q16670 478 aa4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 WLSQ5T9L3 541 aa4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 PRR5LQ6MZQ0 368 aa4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 FRMD5Q7Z6J6 570 aa4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 AKT1S1Q96B36 256 aa4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 HSD17B14Q9BPX1 270 aa4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 UBAC1Q9BSL1 405 aa4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 POLR3CQ9BUI4 534 aaPredicted RBP4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 TAB2Q9NYJ8 693 aa4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 TSKSQ9UJT2 592 aa4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 MYH9P35579 1960 aaKnown RBP4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 FRMPD3Q5JV73 1810 aa4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 B4DLN1 442 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 TGFB1I1O43294 461 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 MAPTP10636 758 aaKnown RBP4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 GYS1P13807 737 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 FOSBP53539 338 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 GPSM2P81274 684 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 MAPK7Q13164 816 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 PPP2R5CQ13362 524 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 KIF22Q14807 665 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 DDB1Q16531 1140 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 CDC37Q16543 378 aaPredicted RBP4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 CLEC16AQ2KHT3 1053 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 ZNF569Q5MCW4 686 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 SPTY2D1Q68D10 685 aaPredicted RBP4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 APOBEC3HQ6NTF7 200 aaKnown RBP4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 PACS2Q86VP3 889 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 ZDHHC14Q8IZN3 488 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 SYT2Q8N9I0 419 aaPredicted RBP4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 ZNF317Q96PQ6 595 aaPredicted RBP4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 ISCUQ9H1K1 167 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 CD209Q9NNX6 404 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 POLLQ9UGP5 575 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 TFR2Q9UP52 801 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 FAN1Q9Y2M0 1017 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 ATP6V0A2Q9Y487 856 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 ZNF638Q14966 1978 aaKnown RBP4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 TRPM7Q96QT4 1865 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 ZBTB7CA1YPR0 619 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 NUTM2BA6NNL0 878 aaPredicted RBP4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 NUTM2EB1AL46 878 aaPredicted RBP4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 C21orf2O43822 256 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 TCEA3O75764 348 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 TCP1P17987 556 aaKnown RBP4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 EPHB4P54760 987 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 EZH2Q15910 746 aaKnown RBP4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 CABP7Q86V35 215 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 USP38Q8NB14 1042 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 ARHGEF1Q92888 912 aaKnown RBP4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 JAKMIP2Q96AA8 810 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 CEP95Q96GE4 821 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 MXD3Q9BW11 206 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 FAM129AQ9BZQ8 928 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 GBP3Q9H0R5 595 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 KCNQ5Q9NR82 932 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 USP17L3A6NCW0 530 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 USP17L4A6NCW7 530 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 A6NNZ2 444 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 ZNF185O15231 689 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 GRIN3BO60391 1043 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 RNF40O75150 1001 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 SERPING1P05155 500 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 GLI1P08151 1106 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 CTNNA2P26232 953 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 PTGIRP43119 386 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 IRAK1P51617 712 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 COASYQ13057 564 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 GIT2Q14161 759 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 TUBB8Q3ZCM7 444 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 ZDHHC24Q6UX98 284 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 DTHD1Q6ZMT9 781 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 USP17L1Q7RTZ2 530 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 TAX1BP1Q86VP1 789 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 NEK11Q8NG66 645 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 ZDHHC15Q96MV8 337 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 MKNK1Q9BUB5 465 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 TMBIM4Q9HC24 238 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 LRRC4CQ9HCJ2 640 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 NYAP2Q9P242 653 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 STIM2Q9P246 746 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 DAGLAQ9Y4D2 1042 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 GBF1Q92538 1859 aa4.95□□□□□ -1.62
GPCPD1-202ENST00000418646 PNMA6FA0A0J9YX94 578 aa4.94□□□□□ -1.62
GPCPD1-202ENST00000418646 LRRC53A6NM62 1247 aa4.94□□□□□ -1.62
GPCPD1-202ENST00000418646 LYPLA2O95372 231 aa4.94□□□□□ -1.62
GPCPD1-202ENST00000418646 CKAP4Q07065 602 aaKnown RBP4.94□□□□□ -1.62
GPCPD1-202ENST00000418646 KLRC3Q07444 240 aa4.94□□□□□ -1.62
GPCPD1-202ENST00000418646 C15orf39Q6ZRI6 1047 aa4.94□□□□□ -1.62
GPCPD1-202ENST00000418646 LARGE2Q8N3Y3 721 aa4.94□□□□□ -1.62
GPCPD1-202ENST00000418646 LARP4BQ92615 738 aaKnown RBP4.94□□□□□ -1.62
GPCPD1-202ENST00000418646 GPKOWQ92917 476 aaPredicted RBP eCLIP4.94□□□□□ -1.624e-7■■■■□ 21.3
GPCPD1-202ENST00000418646 SLC35C1Q96A29 364 aa4.94□□□□□ -1.62
GPCPD1-202ENST00000418646 RRP36Q96EU6 259 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms