RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 KCNA2P16389 499 aa28.81■■■□□ 2.2
CPNE1-207ENST00000414664 CCDC83Q8IWF9 413 aa28.81■■■□□ 2.2
CPNE1-207ENST00000414664 CYP2W1Q8TAV3 490 aa28.81■■■□□ 2.2
CPNE1-207ENST00000414664 BCAS3Q9H6U6 928 aa28.81■■■□□ 2.2
CPNE1-207ENST00000414664 KCNJ14Q9UNX9 436 aa28.81■■■□□ 2.2
CPNE1-207ENST00000414664 SCN10AQ9Y5Y9 1956 aa28.81■■■□□ 2.2
CPNE1-207ENST00000414664 TRIM43BA6NCK2 446 aa28.8■■■□□ 2.2
CPNE1-207ENST00000414664 CD4P01730 458 aa28.8■■■□□ 2.2
CPNE1-207ENST00000414664 MAGEA10P43363 369 aaPredicted RBP28.8■■■□□ 2.2
CPNE1-207ENST00000414664 CHMP4BP1P59074 171 aa28.8■■■□□ 2.2
CPNE1-207ENST00000414664 FAM47CQ5HY64 1035 aa28.8■■■□□ 2.2
CPNE1-207ENST00000414664 SH3RF1Q7Z6J0 888 aa28.8■■■□□ 2.2
CPNE1-207ENST00000414664 TRIM43Q96BQ3 446 aaPredicted RBP28.8■■■□□ 2.2
CPNE1-207ENST00000414664 GPR20Q99678 358 aa28.8■■■□□ 2.2
CPNE1-207ENST00000414664 F2P00734 622 aa28.79■■■□□ 2.2
CPNE1-207ENST00000414664 SUPT20HL2P0C7V6 817 aa28.79■■■□□ 2.2
CPNE1-207ENST00000414664 USP11P51784 963 aa28.79■■■□□ 2.2
CPNE1-207ENST00000414664 PLA2G4DQ86XP0 818 aa28.79■■■□□ 2.2
CPNE1-207ENST00000414664 KAT2BQ92831 832 aa28.79■■■□□ 2.2
CPNE1-207ENST00000414664 GDF15Q99988 308 aa28.79■■■□□ 2.2
CPNE1-207ENST00000414664 SDF4Q9BRK5 362 aa28.79■■■□□ 2.2
CPNE1-207ENST00000414664 PKD2L1Q9P0L9 805 aa28.79■■■□□ 2.2
CPNE1-207ENST00000414664 COLQQ9Y215 455 aaPredicted RBP28.79■■■□□ 2.2
CPNE1-207ENST00000414664 NFASCO94856 1347 aa28.78■■■□□ 2.2
CPNE1-207ENST00000414664 M0R2N6 131 aa28.78■■■□□ 2.2
CPNE1-207ENST00000414664 JAK2O60674 1132 aa28.78■■■□□ 2.2
CPNE1-207ENST00000414664 DTNBO60941 627 aa28.78■■■□□ 2.2
CPNE1-207ENST00000414664 ARP10275 920 aa28.78■■■□□ 2.2
CPNE1-207ENST00000414664 RAG1P15918 1043 aa28.78■■■□□ 2.2
CPNE1-207ENST00000414664 CIITAP33076 1130 aa28.78■■■□□ 2.2
CPNE1-207ENST00000414664 MCM2P49736 904 aa28.78■■■□□ 2.2
CPNE1-207ENST00000414664 PSEN2P49810 448 aa28.78■■■□□ 2.2
CPNE1-207ENST00000414664 SETQ01105 290 aaPredicted RBP28.78■■■□□ 2.2
CPNE1-207ENST00000414664 ST3GAL1Q11201 340 aa28.78■■■□□ 2.2
CPNE1-207ENST00000414664 TRIM29Q14134 588 aa28.78■■■□□ 2.2
CPNE1-207ENST00000414664 NPY5RQ15761 445 aa28.78■■■□□ 2.2
CPNE1-207ENST00000414664 KRT25Q7Z3Z0 450 aa28.78■■■□□ 2.2
CPNE1-207ENST00000414664 AGO4Q9HCK5 861 aaKnown RBP28.78■■■□□ 2.2
CPNE1-207ENST00000414664 BRMS1Q9HCU9 246 aa28.78■■■□□ 2.2
CPNE1-207ENST00000414664 TBX21Q9UL17 535 aa28.78■■■□□ 2.2
CPNE1-207ENST00000414664 FAM86B1E9PN63 330 aa28.77■■■□□ 2.2
CPNE1-207ENST00000414664 FAM86B2P0C5J1 330 aa28.77■■■□□ 2.2
CPNE1-207ENST00000414664 ZNF286BP0CG31 522 aa28.77■■■□□ 2.2
CPNE1-207ENST00000414664 BMP8BP34820 402 aa28.77■■■□□ 2.2
CPNE1-207ENST00000414664 MDM2Q00987 491 aaPredicted RBP28.77■■■□□ 2.2
CPNE1-207ENST00000414664 SP4Q02446 784 aa28.77■■■□□ 2.2
CPNE1-207ENST00000414664 MFSD10Q14728 455 aa28.77■■■□□ 2.2
CPNE1-207ENST00000414664 TBCKQ8TEA7 893 aa28.77■■■□□ 2.2
CPNE1-207ENST00000414664 SEPT1Q8WYJ6 367 aa28.77■■■□□ 2.2
CPNE1-207ENST00000414664 B4GALT4O60513 344 aa28.76■■■□□ 2.19
CPNE1-207ENST00000414664 LGALS2P05162 132 aa28.76■■■□□ 2.19
CPNE1-207ENST00000414664 HMGN5P82970 282 aaKnown RBP28.76■■■□□ 2.19
CPNE1-207ENST00000414664 NONOQ15233 471 aaKnown RBP eCLIP28.76■■■□□ 2.19
CPNE1-207ENST00000414664 KIAA0753Q2KHM9 967 aa28.76■■■□□ 2.19
CPNE1-207ENST00000414664 SESTD1Q86VW0 696 aa28.76■■■□□ 2.19
CPNE1-207ENST00000414664 C7orf31Q8N865 590 aa28.76■■■□□ 2.19
CPNE1-207ENST00000414664 C16orf70Q9BSU1 422 aa28.76■■■□□ 2.19
CPNE1-207ENST00000414664 TRPV6Q9H1D0 765 aa28.76■■■□□ 2.19
CPNE1-207ENST00000414664 JPH1Q9HDC5 661 aaPredicted RBP28.76■■■□□ 2.19
CPNE1-207ENST00000414664 DOCK5Q9H7D0 1870 aa28.75■■■□□ 2.19
CPNE1-207ENST00000414664 IGLV3-22A0A075B6J6 115 aa28.75■■■□□ 2.19
CPNE1-207ENST00000414664 CCDC194A0A1B0GVG4 234 aa28.75■■■□□ 2.19
CPNE1-207ENST00000414664 H3BRB1 525 aa28.75■■■□□ 2.19
CPNE1-207ENST00000414664 HAS3O00219 553 aa28.75■■■□□ 2.19
CPNE1-207ENST00000414664 UBE2OQ9C0C9 1292 aaKnown RBP28.75■■■□□ 2.19
CPNE1-207ENST00000414664 TUT1Q9H6E5 874 aaKnown RBP28.75■■■□□ 2.19
CPNE1-207ENST00000414664 GJB4Q9NTQ9 266 aa28.75■■■□□ 2.19
CPNE1-207ENST00000414664 SLC9A2Q9UBY0 812 aa28.75■■■□□ 2.19
CPNE1-207ENST00000414664 ZNF215Q9UL58 517 aaPredicted RBP28.75■■■□□ 2.19
CPNE1-207ENST00000414664 TIMP1P01033 207 aa28.74■■■□□ 2.19
CPNE1-207ENST00000414664 PRR16Q569H4 304 aa28.74■■■□□ 2.19
CPNE1-207ENST00000414664 BADQ92934 168 aa28.74■■■□□ 2.19
CPNE1-207ENST00000414664 PRO3102Q9H379 93 aa28.74■■■□□ 2.19
CPNE1-207ENST00000414664 TRMT13Q9NUP7 481 aaKnown RBP28.74■■■□□ 2.19
CPNE1-207ENST00000414664 NOD1Q9Y239 953 aa28.74■■■□□ 2.19
CPNE1-207ENST00000414664 KRT2P35908 639 aa28.73■■■□□ 2.19
CPNE1-207ENST00000414664 TCF7P36402 384 aaPredicted RBP28.73■■■□□ 2.19
CPNE1-207ENST00000414664 UTP14CQ5TAP6 766 aaKnown RBP28.73■■■□□ 2.19
CPNE1-207ENST00000414664 ZNF577Q9BSK1 485 aa28.73■■■□□ 2.19
CPNE1-207ENST00000414664 TBC1D22BQ9NU19 505 aa28.73■■■□□ 2.19
CPNE1-207ENST00000414664 A0A1W2PPC1 479 aa28.72■■■□□ 2.19
CPNE1-207ENST00000414664 IPO5O00410 1097 aaKnown RBP28.72■■■□□ 2.19
CPNE1-207ENST00000414664 HDAC6Q9UBN7 1215 aa28.72■■■□□ 2.19
CPNE1-207ENST00000414664 GTF2IRD1Q9UHL9 959 aa28.72■■■□□ 2.19
CPNE1-207ENST00000414664 GSTTP1A0A1W2PQM5 241 aa28.71■■■□□ 2.19
CPNE1-207ENST00000414664 ITGB3BPQ13352 177 aaPredicted RBP28.71■■■□□ 2.19
CPNE1-207ENST00000414664 PTGISQ16647 500 aa28.71■■■□□ 2.19
CPNE1-207ENST00000414664 FAM184AQ8NB25 1140 aa28.71■■■□□ 2.19
CPNE1-207ENST00000414664 PPP1R13LQ8WUF5 828 aa28.71■■■□□ 2.19
CPNE1-207ENST00000414664 HIPK3Q9H422 1215 aa28.71■■■□□ 2.19
CPNE1-207ENST00000414664 TCEAL9Q9UHQ7 104 aa28.71■■■□□ 2.19
CPNE1-207ENST00000414664 LTBP2Q14767 1821 aa28.71■■■□□ 2.19
CPNE1-207ENST00000414664 MMP1P03956 469 aa28.7■■■□□ 2.18
CPNE1-207ENST00000414664 ITGB8P26012 769 aa28.7■■■□□ 2.18
CPNE1-207ENST00000414664 INF2Q27J81 1249 aa28.7■■■□□ 2.18
CPNE1-207ENST00000414664 KRT40Q6A162 431 aa28.7■■■□□ 2.18
CPNE1-207ENST00000414664 MFSD5Q6N075 450 aa28.7■■■□□ 2.18
CPNE1-207ENST00000414664 MOXD1Q6UVY6 613 aa28.7■■■□□ 2.18
CPNE1-207ENST00000414664 PPP1R12CQ9BZL4 782 aa28.7■■■□□ 2.18
CPNE1-207ENST00000414664 TELO2Q9Y4R8 837 aa28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms