RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 MMP3P08254 477 aa18.71■□□□□ 0.59
LINC00398-201ENST00000414407 U2AF2P26368 475 aaKnown RBP eCLIP18.71■□□□□ 0.59
LINC00398-201ENST00000414407 DGKDQ16760 1214 aa18.71■□□□□ 0.59
LINC00398-201ENST00000414407 PRR16Q569H4 304 aa18.71■□□□□ 0.59
LINC00398-201ENST00000414407 EARS2Q5JPH6 523 aaKnown RBP18.71■□□□□ 0.59
LINC00398-201ENST00000414407 C1orf53Q5VUE5 145 aa18.71■□□□□ 0.59
LINC00398-201ENST00000414407 LARP1BQ659C4 914 aaKnown RBP18.71■□□□□ 0.59
LINC00398-201ENST00000414407 CYFIP1Q7L576 1253 aa18.71■□□□□ 0.59
LINC00398-201ENST00000414407 LENG9Q96B70 501 aa18.71■□□□□ 0.59
LINC00398-201ENST00000414407 GLT1D1Q96MS3 346 aa18.71■□□□□ 0.59
LINC00398-201ENST00000414407 HTATIP2Q9BUP3 242 aa18.71■□□□□ 0.59
LINC00398-201ENST00000414407 SEZ6LQ9BYH1 1024 aa18.71■□□□□ 0.59
LINC00398-201ENST00000414407 H3BQV1 296 aa18.7■□□□□ 0.58
LINC00398-201ENST00000414407 PURAQ00577 322 aaKnown RBP18.7■□□□□ 0.58
LINC00398-201ENST00000414407 LETM2Q2VYF4 491 aa18.7■□□□□ 0.58
LINC00398-201ENST00000414407 HSDL1Q3SXM5 330 aa18.7■□□□□ 0.58
LINC00398-201ENST00000414407 NOSTRINQ8IVI9 506 aa18.7■□□□□ 0.58
LINC00398-201ENST00000414407 SDF4Q9BRK5 362 aa18.7■□□□□ 0.58
LINC00398-201ENST00000414407 TBC1D22BQ9NU19 505 aa18.7■□□□□ 0.58
LINC00398-201ENST00000414407 IPO5O00410 1097 aaKnown RBP18.69■□□□□ 0.58
LINC00398-201ENST00000414407 ITGB3BPQ13352 177 aaPredicted RBP18.69■□□□□ 0.58
LINC00398-201ENST00000414407 GNL2Q13823 731 aaKnown RBP18.69■□□□□ 0.58
LINC00398-201ENST00000414407 CXCL17Q6UXB2 119 aa18.69■□□□□ 0.58
LINC00398-201ENST00000414407 FERMT2Q96AC1 680 aa18.69■□□□□ 0.58
LINC00398-201ENST00000414407 GPR20Q99678 358 aa18.69■□□□□ 0.58
LINC00398-201ENST00000414407 ZNF577Q9BSK1 485 aa18.69■□□□□ 0.58
LINC00398-201ENST00000414407 MTG1Q9BT17 334 aaPredicted RBP18.69■□□□□ 0.58
LINC00398-201ENST00000414407 BCAS3Q9H6U6 928 aa18.69■□□□□ 0.58
LINC00398-201ENST00000414407 JPH1Q9HDC5 661 aaPredicted RBP18.69■□□□□ 0.58
LINC00398-201ENST00000414407 STARD7Q9NQZ5 370 aa18.69■□□□□ 0.58
LINC00398-201ENST00000414407 FAM205CA6NFA0 338 aa18.68■□□□□ 0.58
LINC00398-201ENST00000414407 NOP56O00567 594 aaKnown RBP18.68■□□□□ 0.58
LINC00398-201ENST00000414407 DHX15O43143 795 aaKnown RBP18.68■□□□□ 0.58
LINC00398-201ENST00000414407 TDP2O95551 362 aa18.68■□□□□ 0.58
LINC00398-201ENST00000414407 TRAPPC10P48553 1259 aa18.68■□□□□ 0.58
LINC00398-201ENST00000414407 SNX17Q15036 470 aa18.68■□□□□ 0.58
LINC00398-201ENST00000414407 SLC39A5Q6ZMH5 540 aa18.68■□□□□ 0.58
LINC00398-201ENST00000414407 RIT2Q99578 217 aa18.68■□□□□ 0.58
LINC00398-201ENST00000414407 SLC9A2Q9UBY0 812 aa18.68■□□□□ 0.58
LINC00398-201ENST00000414407 DDX25Q9UHL0 483 aaKnown RBP18.68■□□□□ 0.58
LINC00398-201ENST00000414407 MKI67P46013 3256 aaKnown RBP18.68■□□□□ 0.58
LINC00398-201ENST00000414407 A0A0U1RQG5 324 aaPredicted RBP18.67■□□□□ 0.58
LINC00398-201ENST00000414407 TBX3O15119 743 aa18.67■□□□□ 0.58
LINC00398-201ENST00000414407 MSH4O15457 936 aa18.67■□□□□ 0.58
LINC00398-201ENST00000414407 CCNT1O60563 726 aaKnown RBP18.67■□□□□ 0.58
LINC00398-201ENST00000414407 MYL3P08590 195 aa18.67■□□□□ 0.58
LINC00398-201ENST00000414407 ORC2Q13416 577 aaPredicted RBP18.67■□□□□ 0.58
LINC00398-201ENST00000414407 SEPT1Q8WYJ6 367 aa18.67■□□□□ 0.58
LINC00398-201ENST00000414407 SLC5A5Q92911 643 aa18.67■□□□□ 0.58
LINC00398-201ENST00000414407 PKD2L1Q9P0L9 805 aa18.67■□□□□ 0.58
LINC00398-201ENST00000414407 KIF28PB7ZC32 967 aa18.66■□□□□ 0.58
LINC00398-201ENST00000414407 SORBS3O60504 671 aa18.66■□□□□ 0.58
LINC00398-201ENST00000414407 HSP90AA1P07900 732 aaKnown RBP18.66■□□□□ 0.58
LINC00398-201ENST00000414407 PDIA4P13667 645 aaKnown RBP18.66■□□□□ 0.58
LINC00398-201ENST00000414407 MLLT1Q03111 559 aaPredicted RBP18.66■□□□□ 0.58
LINC00398-201ENST00000414407 SLC43A3Q8NBI5 491 aa18.66■□□□□ 0.58
LINC00398-201ENST00000414407 ETNPPLQ8TBG4 499 aa18.66■□□□□ 0.58
LINC00398-201ENST00000414407 VTI1AQ96AJ9 217 aa18.66■□□□□ 0.58
LINC00398-201ENST00000414407 FAM20AQ96MK3 541 aa18.66■□□□□ 0.58
LINC00398-201ENST00000414407 KATNAL1Q9BW62 490 aa18.66■□□□□ 0.58
LINC00398-201ENST00000414407 NOL7Q9UMY1 257 aaKnown RBP18.66■□□□□ 0.58
LINC00398-201ENST00000414407 ARVCFO00192 962 aa18.65■□□□□ 0.58
LINC00398-201ENST00000414407 SLC37A4O43826 429 aa18.65■□□□□ 0.58
LINC00398-201ENST00000414407 ATG7O95352 703 aa18.65■□□□□ 0.58
LINC00398-201ENST00000414407 F2P00734 622 aa18.65■□□□□ 0.58
LINC00398-201ENST00000414407 SYT1P21579 422 aa18.65■□□□□ 0.58
LINC00398-201ENST00000414407 CDK7P50613 346 aa18.65■□□□□ 0.58
LINC00398-201ENST00000414407 KRT76Q01546 638 aa18.65■□□□□ 0.58
LINC00398-201ENST00000414407 ITGA7Q13683 1181 aa18.65■□□□□ 0.58
LINC00398-201ENST00000414407 LRRC26Q2I0M4 334 aa18.65■□□□□ 0.58
LINC00398-201ENST00000414407 ZNF746Q6NUN9 644 aaPredicted RBP18.65■□□□□ 0.58
LINC00398-201ENST00000414407 KAT2BQ92831 832 aa18.65■□□□□ 0.58
LINC00398-201ENST00000414407 KCNMB3Q9NPA1 279 aa18.65■□□□□ 0.58
LINC00398-201ENST00000414407 TCEAL9Q9UHQ7 104 aa18.65■□□□□ 0.58
LINC00398-201ENST00000414407 GSTTP1A0A1W2PQM5 241 aa18.64■□□□□ 0.57
LINC00398-201ENST00000414407 PSMD10O75832 226 aa18.64■□□□□ 0.57
LINC00398-201ENST00000414407 LGALS2P05162 132 aa18.64■□□□□ 0.57
LINC00398-201ENST00000414407 TCF7P36402 384 aaPredicted RBP18.64■□□□□ 0.57
LINC00398-201ENST00000414407 ATN1P54259 1190 aaPredicted RBP18.64■□□□□ 0.57
LINC00398-201ENST00000414407 ACTR2P61160 394 aa18.64■□□□□ 0.57
LINC00398-201ENST00000414407 BECN1Q14457 450 aa18.64■□□□□ 0.57
LINC00398-201ENST00000414407 MCTP1Q6DN14 999 aa18.64■□□□□ 0.57
LINC00398-201ENST00000414407 ANKRD33Q7Z3H0 272 aa18.64■□□□□ 0.57
LINC00398-201ENST00000414407 SMAP1Q8IYB5 467 aaPredicted RBP18.64■□□□□ 0.57
LINC00398-201ENST00000414407 TOX2Q96NM4 488 aa18.64■□□□□ 0.57
LINC00398-201ENST00000414407 C16orf70Q9BSU1 422 aa18.64■□□□□ 0.57
LINC00398-201ENST00000414407 FOXD4L1Q9NU39 408 aa18.64■□□□□ 0.57
LINC00398-201ENST00000414407 MROH7Q68CQ1 1323 aa18.64■□□□□ 0.57
LINC00398-201ENST00000414407 HAS3O00219 553 aa18.63■□□□□ 0.57
LINC00398-201ENST00000414407 GAS7O60861 476 aa18.63■□□□□ 0.57
LINC00398-201ENST00000414407 BAG4O95429 457 aaKnown RBP18.63■□□□□ 0.57
LINC00398-201ENST00000414407 CCNE2O96020 404 aa18.63■□□□□ 0.57
LINC00398-201ENST00000414407 RTP1P59025 263 aa18.63■□□□□ 0.57
LINC00398-201ENST00000414407 SP4Q02446 784 aa18.63■□□□□ 0.57
LINC00398-201ENST00000414407 PTPN11Q06124 597 aaPredicted RBP18.63■□□□□ 0.57
LINC00398-201ENST00000414407 RILPL1Q5EBL4 403 aa18.63■□□□□ 0.57
LINC00398-201ENST00000414407 LRCH2Q5VUJ6 765 aa18.63■□□□□ 0.57
LINC00398-201ENST00000414407 NFRKBQ6P4R8 1299 aa18.63■□□□□ 0.57
LINC00398-201ENST00000414407 BRAPQ7Z569 592 aa18.63■□□□□ 0.57
LINC00398-201ENST00000414407 SLFN12Q8IYM2 578 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms