RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 ZNHIT6Q9NWK9 470 aaKnown RBP4.16□□□□□ -1.74
SF3B1-203ENST00000414174 PIH1D1Q9NWS0 290 aaKnown RBP4.16□□□□□ -1.74
SF3B1-203ENST00000414174 CACNA2D2Q9NY47 1150 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 SNTG2Q9NY99 539 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 DKK3Q9UBP4 350 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 TTLL3Q9Y4R7 772 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 IPPQ9Y573 584 aa4.16□□□□□ -1.74
SF3B1-203ENST00000414174 C2orf81A6NN90 581 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 NFIBO00712 420 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 TOR1BO14657 336 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 NEMFO60524 1076 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 TMCC2O75069 709 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 PRPF40AO75400 957 aaKnown RBP4.15□□□□□ -1.75
SF3B1-203ENST00000414174 PAGE1O75459 146 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 TRIM27P14373 513 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 RPS2P15880 293 aaKnown RBP4.15□□□□□ -1.75
SF3B1-203ENST00000414174 ATF4P18848 351 aaPredicted RBP4.15□□□□□ -1.75
SF3B1-203ENST00000414174 PRPHP41219 470 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 GJA8P48165 433 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 CSE1LP55060 971 aaKnown RBP4.15□□□□□ -1.75
SF3B1-203ENST00000414174 TPD52P55327 224 aaPredicted RBP4.15□□□□□ -1.75
SF3B1-203ENST00000414174 HSD17B7P56937 341 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 RACK1P63244 317 aaKnown RBP4.15□□□□□ -1.75
SF3B1-203ENST00000414174 DAB2P98082 770 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 ZNF252P-AS1Q0IIN9 211 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 MRPL28Q13084 256 aaKnown RBP4.15□□□□□ -1.75
SF3B1-203ENST00000414174 TBX2Q13207 712 aaPredicted RBP4.15□□□□□ -1.75
SF3B1-203ENST00000414174 CDK5R2Q13319 367 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 MOGSQ13724 837 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 IFI16Q16666 785 aaKnown RBP4.15□□□□□ -1.75
SF3B1-203ENST00000414174 TKFCQ3LXA3 575 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 SPDYCQ5MJ68 293 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 HP1BP3Q5SSJ5 553 aaPredicted RBP4.15□□□□□ -1.75
SF3B1-203ENST00000414174 CCDC122Q5T0U0 273 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 NXNQ6DKJ4 435 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 FAAH2Q6GMR7 532 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 DTHD1Q6ZMT9 781 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 MILR1Q7Z6M3 343 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 TRIM74Q86UV6 250 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 TRIM73Q86UV7 250 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 MORC1Q86VD1 984 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 DGKHQ86XP1 1220 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 LILRB2Q8N423 598 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 TRIML1Q8N9V2 468 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 IL17REQ8NFR9 667 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 GSDMBQ8TAX9 411 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 IPCEF1Q8WWN9 437 aaPredicted RBP4.15□□□□□ -1.75
SF3B1-203ENST00000414174 USP6NLQ92738 828 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 HVCN1Q96D96 273 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 LIN37Q96GY3 246 aaPredicted RBP4.15□□□□□ -1.75
SF3B1-203ENST00000414174 C20orf173Q96LM9 149 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 FAM161BQ96MY7 647 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 SCLT1Q96NL6 688 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 SLC39A3Q9BRY0 314 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 CENPOQ9BU64 300 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 UNC45AQ9H3U1 944 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 DEF6Q9H4E7 631 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 KANSL2Q9H9L4 492 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 ZFYVE1Q9HBF4 777 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 VEZTQ9HBM0 779 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 TCF7L2Q9NQB0 619 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 RAD18Q9NS91 495 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 KRT82Q9NSB4 513 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 KCTD5Q9NXV2 234 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 GPN3Q9UHW5 284 aaPredicted RBP4.15□□□□□ -1.75
SF3B1-203ENST00000414174 CTNNA3Q9UI47 895 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 BLOC1S6Q9UL45 172 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 DAGLAQ9Y4D2 1042 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 RNF123Q5XPI4 1314 aa4.15□□□□□ -1.75
SF3B1-203ENST00000414174 BRD4O60885 1362 aaPredicted RBP4.14□□□□□ -1.75
SF3B1-203ENST00000414174 KAT6BQ8WYB5 2073 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 ESYT3A0FGR9 886 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 TRIM64A6NGJ6 449 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 TRIM64BA6NI03 449 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 ENC1O14682 589 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 MUSKO15146 869 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 KINO60870 393 aaKnown RBP4.14□□□□□ -1.75
SF3B1-203ENST00000414174 INMTO95050 263 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 CNOT4O95628 575 aaKnown RBP4.14□□□□□ -1.75
SF3B1-203ENST00000414174 HSPA5P11021 654 aaKnown RBP4.14□□□□□ -1.75
SF3B1-203ENST00000414174 IMPDH2P12268 514 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 MYCLP1P12525 358 aaPredicted RBP4.14□□□□□ -1.75
SF3B1-203ENST00000414174 HOXA5P20719 270 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 GRK2P25098 689 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 HPDP32754 393 aaPredicted RBP4.14□□□□□ -1.75
SF3B1-203ENST00000414174 NTF4P34130 210 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 HSPA4P34932 840 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 CTNNA1P35221 906 aaKnown RBP4.14□□□□□ -1.75
SF3B1-203ENST00000414174 AFMP43652 599 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 RAB27AP51159 221 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 PLIN5Q00G26 463 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 PLCB3Q01970 1234 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 APBA1Q02410 837 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 ID3Q02535 119 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 LRRC74AQ0VAA2 488 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 TRAF1Q13077 416 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 PRPF4BQ13523 1007 aaKnown RBP4.14□□□□□ -1.75
SF3B1-203ENST00000414174 TTLL4Q14679 1199 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 TNIP1Q15025 636 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 AOC3Q16853 763 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms