RNA–Protein interactions for RNA: ENST00000413517.1

HERPUD2-203, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-203ENST00000413517 NKRFO15226 690 aaKnown RBP eCLIP9.84□□□□□ -0.83
HERPUD2-203ENST00000413517 SORBS3O60504 671 aa9.84□□□□□ -0.83
HERPUD2-203ENST00000413517 B4GALT4O60513 344 aa9.84□□□□□ -0.83
HERPUD2-203ENST00000413517 EIF3JO75822 258 aaKnown RBP9.84□□□□□ -0.83
HERPUD2-203ENST00000413517 MMP3P08254 477 aa9.84□□□□□ -0.83
HERPUD2-203ENST00000413517 MYL3P08590 195 aa9.84□□□□□ -0.83
HERPUD2-203ENST00000413517 HMGB1P09429 215 aaKnown RBP9.84□□□□□ -0.83
HERPUD2-203ENST00000413517 ADD1P35611 737 aaKnown RBP9.84□□□□□ -0.83
HERPUD2-203ENST00000413517 ITGA7Q13683 1181 aa9.84□□□□□ -0.83
HERPUD2-203ENST00000413517 TDHQ8IZJ6 230 aa9.84□□□□□ -0.83
HERPUD2-203ENST00000413517 FBXL16Q8N461 479 aa9.84□□□□□ -0.83
HERPUD2-203ENST00000413517 SAMD3Q8N6K7 520 aa9.84□□□□□ -0.83
HERPUD2-203ENST00000413517 AFG1LQ8WV93 481 aa9.84□□□□□ -0.83
HERPUD2-203ENST00000413517 KAT2BQ92831 832 aa9.84□□□□□ -0.83
HERPUD2-203ENST00000413517 VTI1AQ96AJ9 217 aa9.84□□□□□ -0.83
HERPUD2-203ENST00000413517 MPHOSPH6Q99547 160 aaKnown RBP9.84□□□□□ -0.83
HERPUD2-203ENST00000413517 UPF3BQ9BZI7 483 aaKnown RBP9.84□□□□□ -0.83
HERPUD2-203ENST00000413517 TRPV6Q9H1D0 765 aa9.84□□□□□ -0.83
HERPUD2-203ENST00000413517 ZSWIM6Q9HCJ5 1215 aa9.84□□□□□ -0.83
HERPUD2-203ENST00000413517 SEC63Q9UGP8 760 aaKnown RBP9.84□□□□□ -0.83
HERPUD2-203ENST00000413517 TELO2Q9Y4R8 837 aa9.84□□□□□ -0.83
HERPUD2-203ENST00000413517 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.83□□□□□ -0.84
HERPUD2-203ENST00000413517 DCDC2CA8MYV0 355 aa9.83□□□□□ -0.84
HERPUD2-203ENST00000413517 B4DLN1 442 aa9.83□□□□□ -0.84
HERPUD2-203ENST00000413517 EPB41L2O43491 1005 aaKnown RBP9.83□□□□□ -0.84
HERPUD2-203ENST00000413517 PPFIA3O75145 1194 aa9.83□□□□□ -0.84
HERPUD2-203ENST00000413517 CABYRO75952 493 aa9.83□□□□□ -0.84
HERPUD2-203ENST00000413517 GH1P01241 217 aa9.83□□□□□ -0.84
HERPUD2-203ENST00000413517 UBA1P22314 1058 aaKnown RBP9.83□□□□□ -0.84
HERPUD2-203ENST00000413517 CCND2P30279 289 aa9.83□□□□□ -0.84
HERPUD2-203ENST00000413517 MRPL12P52815 198 aaKnown RBP9.83□□□□□ -0.84
HERPUD2-203ENST00000413517 RCAN1P53805 252 aa9.83□□□□□ -0.84
HERPUD2-203ENST00000413517 EVCP57679 992 aa9.83□□□□□ -0.84
HERPUD2-203ENST00000413517 TRAF1Q13077 416 aa9.83□□□□□ -0.84
HERPUD2-203ENST00000413517 NTRK3Q16288 839 aa9.83□□□□□ -0.84
HERPUD2-203ENST00000413517 PADI6Q6TGC4 694 aa9.83□□□□□ -0.84
HERPUD2-203ENST00000413517 SYNE3Q6ZMZ3 975 aa9.83□□□□□ -0.84
HERPUD2-203ENST00000413517 HEATR3Q7Z4Q2 680 aa9.83□□□□□ -0.84
HERPUD2-203ENST00000413517 VWCEQ96DN2 955 aa9.83□□□□□ -0.84
HERPUD2-203ENST00000413517 INPP4AQ96PE3 977 aaPredicted RBP9.83□□□□□ -0.84
HERPUD2-203ENST00000413517 CTAGE1Q96RT6 745 aa9.83□□□□□ -0.84
HERPUD2-203ENST00000413517 PPP1R12CQ9BZL4 782 aa9.83□□□□□ -0.84
HERPUD2-203ENST00000413517 NCOA5Q9HCD5 579 aaKnown RBP9.83□□□□□ -0.84
HERPUD2-203ENST00000413517 TMEM39AQ9NV64 488 aa9.83□□□□□ -0.84
HERPUD2-203ENST00000413517 RBM28Q9NW13 759 aaKnown RBP9.83□□□□□ -0.84
HERPUD2-203ENST00000413517 PRKAG2Q9UGJ0 569 aa9.83□□□□□ -0.84
HERPUD2-203ENST00000413517 NAP1L2Q9ULW6 460 aaPredicted RBP9.83□□□□□ -0.84
HERPUD2-203ENST00000413517 MRVI1Q9Y6F6 885 aa9.83□□□□□ -0.84
HERPUD2-203ENST00000413517 V9GY48 417 aaPredicted RBP9.83□□□□□ -0.84
HERPUD2-203ENST00000413517 SIP14410 1827 aa9.83□□□□□ -0.84
HERPUD2-203ENST00000413517 LOXHD1Q8IVV2 1947 aa9.83□□□□□ -0.84
HERPUD2-203ENST00000413517 CHD9Q3L8U1 2897 aa9.83□□□□□ -0.84
HERPUD2-203ENST00000413517 MYH9P35579 1960 aaKnown RBP9.83□□□□□ -0.84
HERPUD2-203ENST00000413517 STXBP3O00186 592 aa9.82□□□□□ -0.84
HERPUD2-203ENST00000413517 SPTLC1O15269 473 aa9.82□□□□□ -0.84
HERPUD2-203ENST00000413517 SEC24BO95487 1268 aa9.82□□□□□ -0.84
HERPUD2-203ENST00000413517 HOXD8P13378 290 aaPredicted RBP9.82□□□□□ -0.84
HERPUD2-203ENST00000413517 RFX1P22670 979 aa9.82□□□□□ -0.84
HERPUD2-203ENST00000413517 CYP2C18P33260 490 aa9.82□□□□□ -0.84
HERPUD2-203ENST00000413517 CPT1AP50416 773 aa9.82□□□□□ -0.84
HERPUD2-203ENST00000413517 METAP2P50579 478 aaKnown RBP eCLIP9.82□□□□□ -0.84
HERPUD2-203ENST00000413517 SHHQ15465 462 aa9.82□□□□□ -0.84
HERPUD2-203ENST00000413517 PKN1Q16512 942 aa9.82□□□□□ -0.84
HERPUD2-203ENST00000413517 NBPF20Q3BBV1 942 aa9.82□□□□□ -0.84
HERPUD2-203ENST00000413517 RUFY3Q7L099 469 aa9.82□□□□□ -0.84
HERPUD2-203ENST00000413517 C16orf59Q7L2K0 433 aa9.82□□□□□ -0.84
HERPUD2-203ENST00000413517 SMARCC2Q8TAQ2 1214 aa9.82□□□□□ -0.84
HERPUD2-203ENST00000413517 SPIRE2Q8WWL2 714 aa9.82□□□□□ -0.84
HERPUD2-203ENST00000413517 EMID1Q96A84 441 aaPredicted RBP9.82□□□□□ -0.84
HERPUD2-203ENST00000413517 PGBD1Q96JS3 809 aa9.82□□□□□ -0.84
HERPUD2-203ENST00000413517 LBHD1Q9BQE6 289 aaPredicted RBP9.82□□□□□ -0.84
HERPUD2-203ENST00000413517 MTG1Q9BT17 334 aaPredicted RBP9.82□□□□□ -0.84
HERPUD2-203ENST00000413517 NOC4LQ9BVI4 516 aaKnown RBP9.82□□□□□ -0.84
HERPUD2-203ENST00000413517 WNT8AQ9H1J5 351 aa9.82□□□□□ -0.84
HERPUD2-203ENST00000413517 ALDH8A1Q9H2A2 487 aaPredicted RBP9.82□□□□□ -0.84
HERPUD2-203ENST00000413517 PSTPIP2Q9H939 334 aa9.82□□□□□ -0.84
HERPUD2-203ENST00000413517 TRMT13Q9NUP7 481 aaKnown RBP9.82□□□□□ -0.84
HERPUD2-203ENST00000413517 RTEL1Q9NZ71 1219 aa9.82□□□□□ -0.84
HERPUD2-203ENST00000413517 PCDHGA10Q9Y5H3 936 aa9.82□□□□□ -0.84
HERPUD2-203ENST00000413517 MROH7Q68CQ1 1323 aa9.82□□□□□ -0.84
HERPUD2-203ENST00000413517 ZEB2O60315 1214 aa9.81□□□□□ -0.84
HERPUD2-203ENST00000413517 DTNBO60941 627 aa9.81□□□□□ -0.84
HERPUD2-203ENST00000413517 GGPS1O95749 300 aa9.81□□□□□ -0.84
HERPUD2-203ENST00000413517 TIMP1P01033 207 aa9.81□□□□□ -0.84
HERPUD2-203ENST00000413517 ZNF286BP0CG31 522 aa9.81□□□□□ -0.84
HERPUD2-203ENST00000413517 CYP2C9P11712 490 aa9.81□□□□□ -0.84
HERPUD2-203ENST00000413517 RAG1P15918 1043 aa9.81□□□□□ -0.84
HERPUD2-203ENST00000413517 PSMA5P28066 241 aa9.81□□□□□ -0.84
HERPUD2-203ENST00000413517 PDIA3P30101 505 aaKnown RBP9.81□□□□□ -0.84
HERPUD2-203ENST00000413517 ICAM3P32942 547 aa9.81□□□□□ -0.84
HERPUD2-203ENST00000413517 CCT2P78371 535 aaKnown RBP9.81□□□□□ -0.84
HERPUD2-203ENST00000413517 FGD1P98174 961 aa9.81□□□□□ -0.84
HERPUD2-203ENST00000413517 HSDL1Q3SXM5 330 aa9.81□□□□□ -0.84
HERPUD2-203ENST00000413517 LRIT3Q3SXY7 679 aa9.81□□□□□ -0.84
HERPUD2-203ENST00000413517 CELF3Q5SZQ8 465 aaKnown RBP9.81□□□□□ -0.84
HERPUD2-203ENST00000413517 PCNX4Q63HM2 1172 aa9.81□□□□□ -0.84
HERPUD2-203ENST00000413517 PHKBQ93100 1093 aa9.81□□□□□ -0.84
HERPUD2-203ENST00000413517 TM6SF1Q9BZW5 370 aa9.81□□□□□ -0.84
HERPUD2-203ENST00000413517 TMEM260Q9NX78 707 aa9.81□□□□□ -0.84
HERPUD2-203ENST00000413517 BARHL2Q9NY43 387 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms