RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 MYO1CO00159 1063 aa16.53■□□□□ 0.24
TTC39A-208ENST00000413473 ZBTB5O15062 677 aa16.53■□□□□ 0.24
TTC39A-208ENST00000413473 SRLQ86TD4 932 aa16.53■□□□□ 0.24
TTC39A-208ENST00000413473 RNF10Q8N5U6 811 aaKnown RBP16.53■□□□□ 0.24
TTC39A-208ENST00000413473 LSM14BQ9BX40 385 aaKnown RBP16.53■□□□□ 0.24
TTC39A-208ENST00000413473 NT5C3AQ9H0P0 336 aa16.53■□□□□ 0.24
TTC39A-208ENST00000413473 LRRC4BQ9NT99 713 aa16.53■□□□□ 0.24
TTC39A-208ENST00000413473 TAF1LQ8IZX4 1826 aa16.53■□□□□ 0.24
TTC39A-208ENST00000413473 USP17L15C9J2P7 530 aa16.53■□□□□ 0.24
TTC39A-208ENST00000413473 USP17L13C9JLJ4 530 aa16.53■□□□□ 0.24
TTC39A-208ENST00000413473 USP17L11C9JVI0 530 aa16.53■□□□□ 0.24
TTC39A-208ENST00000413473 USP17L18D6R9N7 530 aa16.53■□□□□ 0.24
TTC39A-208ENST00000413473 USP17L22D6RA61 530 aa16.53■□□□□ 0.24
TTC39A-208ENST00000413473 USP17L17D6RBQ6 530 aa16.53■□□□□ 0.24
TTC39A-208ENST00000413473 USP17L19D6RCP7 530 aa16.53■□□□□ 0.24
TTC39A-208ENST00000413473 USP17L20D6RJB6 530 aa16.53■□□□□ 0.24
TTC39A-208ENST00000413473 MPHOSPH10O00566 681 aaKnown RBP16.53■□□□□ 0.24
TTC39A-208ENST00000413473 PLA2G4BP0C869 781 aa16.53■□□□□ 0.24
TTC39A-208ENST00000413473 SLURP2P0DP57 97 aa16.53■□□□□ 0.24
TTC39A-208ENST00000413473 GYS1P13807 737 aa16.53■□□□□ 0.24
TTC39A-208ENST00000413473 USP17L24Q0WX57 530 aa16.53■□□□□ 0.24
TTC39A-208ENST00000413473 HERC4Q5GLZ8 1057 aaPredicted RBP16.53■□□□□ 0.24
TTC39A-208ENST00000413473 USP17L6PQ6QN14 398 aa16.53■□□□□ 0.24
TTC39A-208ENST00000413473 MS4A14Q96JA4 679 aa16.53■□□□□ 0.24
TTC39A-208ENST00000413473 SERPING1P05155 500 aa16.52■□□□□ 0.24
TTC39A-208ENST00000413473 GCFC2P16383 781 aaKnown RBP16.52■□□□□ 0.24
TTC39A-208ENST00000413473 SHMT1P34896 483 aa16.52■□□□□ 0.24
TTC39A-208ENST00000413473 HYIQ5T013 277 aa16.52■□□□□ 0.24
TTC39A-208ENST00000413473 CCDC65Q8IXS2 484 aa16.52■□□□□ 0.24
TTC39A-208ENST00000413473 USP40Q9NVE5 1235 aa16.52■□□□□ 0.24
TTC39A-208ENST00000413473 STIM2Q9P246 746 aa16.52■□□□□ 0.24
TTC39A-208ENST00000413473 RRP15Q9Y3B9 282 aaKnown RBP16.52■□□□□ 0.24
TTC39A-208ENST00000413473 PCDHA2Q9Y5H9 948 aa16.52■□□□□ 0.24
TTC39A-208ENST00000413473 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.52■□□□□ 0.24
TTC39A-208ENST00000413473 POTEB3A0JP26 581 aa16.52■□□□□ 0.23
TTC39A-208ENST00000413473 POTECB2RU33 542 aa16.52■□□□□ 0.23
TTC39A-208ENST00000413473 RBAK-RBAKDNI3L0D1 243 aa16.52■□□□□ 0.23
TTC39A-208ENST00000413473 TRIM66O15016 1216 aa16.52■□□□□ 0.23
TTC39A-208ENST00000413473 ARID5AQ03989 594 aa16.52■□□□□ 0.23
TTC39A-208ENST00000413473 GPATCH4Q5T3I0 446 aaKnown RBP16.52■□□□□ 0.23
TTC39A-208ENST00000413473 HAUS3Q68CZ6 603 aa16.52■□□□□ 0.23
TTC39A-208ENST00000413473 POTEBQ6S5H4 581 aa16.52■□□□□ 0.23
TTC39A-208ENST00000413473 ARHGAP27Q6ZUM4 889 aa16.52■□□□□ 0.23
TTC39A-208ENST00000413473 TRIM59Q8IWR1 403 aa16.52■□□□□ 0.23
TTC39A-208ENST00000413473 TBC1D5Q92609 795 aa16.52■□□□□ 0.23
TTC39A-208ENST00000413473 CEP63Q96MT8 703 aa16.52■□□□□ 0.23
TTC39A-208ENST00000413473 TRIM34Q9BYJ4 488 aa16.52■□□□□ 0.23
TTC39A-208ENST00000413473 NUCKS1Q9H1E3 243 aaKnown RBP16.52■□□□□ 0.23
TTC39A-208ENST00000413473 RBM12Q9NTZ6 932 aaKnown RBP16.52■□□□□ 0.23
TTC39A-208ENST00000413473 TMEM51Q9NW97 253 aa16.52■□□□□ 0.23
TTC39A-208ENST00000413473 GPBP1Q86WP2 473 aa16.51■□□□□ 0.23
TTC39A-208ENST00000413473 CERS5Q8N5B7 392 aa16.51■□□□□ 0.23
TTC39A-208ENST00000413473 SCFD1Q8WVM8 642 aa16.51■□□□□ 0.23
TTC39A-208ENST00000413473 SYN2Q92777 582 aaPredicted RBP16.51■□□□□ 0.23
TTC39A-208ENST00000413473 MXD3Q9BW11 206 aa16.51■□□□□ 0.23
TTC39A-208ENST00000413473 EMILIN3Q9NT22 766 aa16.51■□□□□ 0.23
TTC39A-208ENST00000413473 SWAP70Q9UH65 585 aa16.51■□□□□ 0.23
TTC39A-208ENST00000413473 ATF5Q9Y2D1 282 aaPredicted RBP16.51■□□□□ 0.23
TTC39A-208ENST00000413473 KDM3AQ9Y4C1 1321 aa16.51■□□□□ 0.23
TTC39A-208ENST00000413473 RAD21O60216 631 aa16.51■□□□□ 0.23
TTC39A-208ENST00000413473 ENOX2Q16206 610 aaKnown RBP16.51■□□□□ 0.23
TTC39A-208ENST00000413473 C10orf67Q8IYJ2 551 aa16.51■□□□□ 0.23
TTC39A-208ENST00000413473 PLEKHA4Q9H4M7 779 aa16.51■□□□□ 0.23
TTC39A-208ENST00000413473 RSPH14Q9UHP6 348 aa16.51■□□□□ 0.23
TTC39A-208ENST00000413473 ATP6V0A2Q9Y487 856 aa16.51■□□□□ 0.23
TTC39A-208ENST00000413473 NHSQ6T4R5 1651 aa16.5■□□□□ 0.23
TTC39A-208ENST00000413473 GNA14O95837 355 aa16.5■□□□□ 0.23
TTC39A-208ENST00000413473 CYP11B2P19099 503 aa16.5■□□□□ 0.23
TTC39A-208ENST00000413473 SCNN1DP51172 638 aa16.5■□□□□ 0.23
TTC39A-208ENST00000413473 DNA2P51530 1060 aa16.5■□□□□ 0.23
TTC39A-208ENST00000413473 ADAM9Q13443 819 aa16.5■□□□□ 0.23
TTC39A-208ENST00000413473 CFAP221Q4G0U5 840 aa16.5■□□□□ 0.23
TTC39A-208ENST00000413473 RUBCNQ92622 972 aa16.5■□□□□ 0.23
TTC39A-208ENST00000413473 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.5■□□□□ 0.23
TTC39A-208ENST00000413473 ZHX3Q9H4I2 956 aa16.5■□□□□ 0.23
TTC39A-208ENST00000413473 GOLGA6CA6NDK9 693 aa16.5■□□□□ 0.23
TTC39A-208ENST00000413473 PALMO75781 387 aa16.5■□□□□ 0.23
TTC39A-208ENST00000413473 GOLGA6DP0CG33 693 aa16.5■□□□□ 0.23
TTC39A-208ENST00000413473 HOXA10P31260 410 aaPredicted RBP16.5■□□□□ 0.23
TTC39A-208ENST00000413473 STAT3P40763 770 aa16.5■□□□□ 0.23
TTC39A-208ENST00000413473 RAPGEF1Q13905 1077 aa16.5■□□□□ 0.23
TTC39A-208ENST00000413473 C8orf74Q6P047 294 aa16.5■□□□□ 0.23
TTC39A-208ENST00000413473 FAM76AQ8TAV0 307 aa16.5■□□□□ 0.23
TTC39A-208ENST00000413473 TSPYL1Q9H0U9 437 aa16.5■□□□□ 0.23
TTC39A-208ENST00000413473 KCTD10Q9H3F6 313 aa16.5■□□□□ 0.23
TTC39A-208ENST00000413473 GOLGA6AQ9NYA3 693 aa16.5■□□□□ 0.23
TTC39A-208ENST00000413473 FOCADQ5VW36 1801 aa16.49■□□□□ 0.23
TTC39A-208ENST00000413473 KRT18P05783 430 aaKnown RBP16.49■□□□□ 0.23
TTC39A-208ENST00000413473 ADRA2BP18089 450 aa16.49■□□□□ 0.23
TTC39A-208ENST00000413473 KLRC1P26715 233 aa16.49■□□□□ 0.23
TTC39A-208ENST00000413473 ADAMTS1Q9UHI8 967 aa16.49■□□□□ 0.23
TTC39A-208ENST00000413473 TSKSQ9UJT2 592 aa16.49■□□□□ 0.23
TTC39A-208ENST00000413473 A0A087X0T9 212 aa16.49■□□□□ 0.23
TTC39A-208ENST00000413473 MED24O75448 989 aa16.49■□□□□ 0.23
TTC39A-208ENST00000413473 FTCDO95954 541 aa16.49■□□□□ 0.23
TTC39A-208ENST00000413473 FAM228BP0C875 321 aa16.49■□□□□ 0.23
TTC39A-208ENST00000413473 EPHB4P54760 987 aa16.49■□□□□ 0.23
TTC39A-208ENST00000413473 MARSP56192 900 aaKnown RBP16.49■□□□□ 0.23
TTC39A-208ENST00000413473 NAB2Q15742 525 aa16.49■□□□□ 0.23
TTC39A-208ENST00000413473 SLC18A3Q16572 532 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms