RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 ARHGAP20Q9P2F6 1191 aa12.72□□□□□ -0.37
TRAFD1-202ENST00000412615 EPHB6O15197 1021 aa12.71□□□□□ -0.37
TRAFD1-202ENST00000412615 RHOXF2BP0C7M4 288 aa12.71□□□□□ -0.37
TRAFD1-202ENST00000412615 BMP3P12645 472 aa12.71□□□□□ -0.37
TRAFD1-202ENST00000412615 CKAP4Q07065 602 aaKnown RBP12.71□□□□□ -0.37
TRAFD1-202ENST00000412615 PRR16Q569H4 304 aa12.71□□□□□ -0.37
TRAFD1-202ENST00000412615 SECISBP2LQ93073 1101 aaKnown RBP12.71□□□□□ -0.37
TRAFD1-202ENST00000412615 PNKPQ96T60 521 aa12.71□□□□□ -0.37
TRAFD1-202ENST00000412615 RHOXF2Q9BQY4 288 aa12.71□□□□□ -0.37
TRAFD1-202ENST00000412615 TDRD3Q9H7E2 651 aaKnown RBP12.71□□□□□ -0.37
TRAFD1-202ENST00000412615 PCDHA2Q9Y5H9 948 aa12.71□□□□□ -0.37
TRAFD1-202ENST00000412615 AKR1B10O60218 316 aa12.71□□□□□ -0.38
TRAFD1-202ENST00000412615 MED24O75448 989 aa12.71□□□□□ -0.38
TRAFD1-202ENST00000412615 MMP14P50281 582 aa12.71□□□□□ -0.38
TRAFD1-202ENST00000412615 KIF11P52732 1056 aa12.71□□□□□ -0.38
TRAFD1-202ENST00000412615 SMC1AQ14683 1233 aaKnown RBP12.71□□□□□ -0.38
TRAFD1-202ENST00000412615 BEND6Q5SZJ8 279 aaPredicted RBP12.71□□□□□ -0.38
TRAFD1-202ENST00000412615 ETNPPLQ8TBG4 499 aa12.71□□□□□ -0.38
TRAFD1-202ENST00000412615 UIMC1Q96RL1 719 aa12.71□□□□□ -0.38
TRAFD1-202ENST00000412615 IFIH1Q9BYX4 1025 aaKnown RBP12.71□□□□□ -0.38
TRAFD1-202ENST00000412615 NUCKS1Q9H1E3 243 aaKnown RBP12.71□□□□□ -0.38
TRAFD1-202ENST00000412615 EMILIN3Q9NT22 766 aa12.71□□□□□ -0.38
TRAFD1-202ENST00000412615 TBC1D7Q9P0N9 293 aa12.71□□□□□ -0.38
TRAFD1-202ENST00000412615 ZNF219Q9P2Y4 722 aaPredicted RBP12.71□□□□□ -0.38
TRAFD1-202ENST00000412615 HDAC6Q9UBN7 1215 aa12.71□□□□□ -0.38
TRAFD1-202ENST00000412615 SYNPO2Q9UMS6 1093 aa12.71□□□□□ -0.38
TRAFD1-202ENST00000412615 PCDHA13Q9Y5I0 950 aa12.71□□□□□ -0.38
TRAFD1-202ENST00000412615 ATRNL1Q5VV63 1379 aa12.71□□□□□ -0.38
TRAFD1-202ENST00000412615 SIPA1L1O43166 1804 aa12.7□□□□□ -0.38
TRAFD1-202ENST00000412615 LRRC53A6NM62 1247 aa12.7□□□□□ -0.38
TRAFD1-202ENST00000412615 ZNF263O14978 683 aa12.7□□□□□ -0.38
TRAFD1-202ENST00000412615 LCA5LO95447 670 aa12.7□□□□□ -0.38
TRAFD1-202ENST00000412615 PLEKP08567 350 aaPredicted RBP12.7□□□□□ -0.38
TRAFD1-202ENST00000412615 SREBF1P36956 1147 aa12.7□□□□□ -0.38
TRAFD1-202ENST00000412615 STAT3P40763 770 aa12.7□□□□□ -0.38
TRAFD1-202ENST00000412615 SLC12A3P55017 1021 aa12.7□□□□□ -0.38
TRAFD1-202ENST00000412615 MARSP56192 900 aaKnown RBP12.7□□□□□ -0.38
TRAFD1-202ENST00000412615 USH1GQ495M9 461 aa12.7□□□□□ -0.38
TRAFD1-202ENST00000412615 BTNL9Q6UXG8 535 aa12.7□□□□□ -0.38
TRAFD1-202ENST00000412615 HDXQ7Z353 690 aa12.7□□□□□ -0.38
TRAFD1-202ENST00000412615 CATSPER3Q86XQ3 398 aa12.7□□□□□ -0.38
TRAFD1-202ENST00000412615 TRIM58Q8NG06 486 aa12.7□□□□□ -0.38
TRAFD1-202ENST00000412615 BAP1Q92560 729 aa12.7□□□□□ -0.38
TRAFD1-202ENST00000412615 FAM20AQ96MK3 541 aa12.7□□□□□ -0.38
TRAFD1-202ENST00000412615 DNM3Q9UQ16 869 aa12.7□□□□□ -0.38
TRAFD1-202ENST00000412615 MACROD2A1Z1Q3 448 aa12.7□□□□□ -0.38
TRAFD1-202ENST00000412615 FRMD3A2A2Y4 597 aa12.7□□□□□ -0.38
TRAFD1-202ENST00000412615 MAP2K7O14733 419 aa12.7□□□□□ -0.38
TRAFD1-202ENST00000412615 TACC1O75410 805 aa12.7□□□□□ -0.38
TRAFD1-202ENST00000412615 GH2P01242 217 aa12.7□□□□□ -0.38
TRAFD1-202ENST00000412615 RPA1P27694 616 aa12.7□□□□□ -0.38
TRAFD1-202ENST00000412615 EIF4A3P38919 411 aaKnown RBP12.7□□□□□ -0.38
TRAFD1-202ENST00000412615 SNAP25P60880 206 aa12.7□□□□□ -0.38
TRAFD1-202ENST00000412615 SPIRE1Q08AE8 756 aa12.7□□□□□ -0.38
TRAFD1-202ENST00000412615 KCNMA1Q12791 1236 aa12.7□□□□□ -0.38
TRAFD1-202ENST00000412615 TRAF1Q13077 416 aa12.7□□□□□ -0.38
TRAFD1-202ENST00000412615 AOC3Q16853 763 aa12.7□□□□□ -0.38
TRAFD1-202ENST00000412615 CC2D2BQ6DHV5 1058 aa12.7□□□□□ -0.38
TRAFD1-202ENST00000412615 PPP4R3CPQ6ZMV5 832 aa12.7□□□□□ -0.38
TRAFD1-202ENST00000412615 NELFCDQ8IXH7 590 aa12.7□□□□□ -0.38
TRAFD1-202ENST00000412615 TXLNBQ8N3L3 684 aa12.7□□□□□ -0.38
TRAFD1-202ENST00000412615 NOA1Q8NC60 698 aaKnown RBP12.7□□□□□ -0.38
TRAFD1-202ENST00000412615 DUSP10Q9Y6W6 482 aa12.7□□□□□ -0.38
TRAFD1-202ENST00000412615 MCM3P25205 808 aa12.69□□□□□ -0.38
TRAFD1-202ENST00000412615 CIITAP33076 1130 aa12.69□□□□□ -0.38
TRAFD1-202ENST00000412615 WDR93Q6P2C0 686 aa12.69□□□□□ -0.38
TRAFD1-202ENST00000412615 PDXDC1Q6P996 788 aa12.69□□□□□ -0.38
TRAFD1-202ENST00000412615 KRT26Q7Z3Y9 468 aa12.69□□□□□ -0.38
TRAFD1-202ENST00000412615 SUPT20HQ8NEM7 779 aa12.69□□□□□ -0.38
TRAFD1-202ENST00000412615 SCFD1Q8WVM8 642 aa12.69□□□□□ -0.38
TRAFD1-202ENST00000412615 P2RX7Q99572 595 aaKnown RBP12.69□□□□□ -0.38
TRAFD1-202ENST00000412615 KCTD10Q9H3F6 313 aa12.69□□□□□ -0.38
TRAFD1-202ENST00000412615 FAM184BQ9ULE4 1060 aa12.69□□□□□ -0.38
TRAFD1-202ENST00000412615 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.69□□□□□ -0.38
TRAFD1-202ENST00000412615 NPHP3-ACAD11A0A0J9YXS1 232 aa12.69□□□□□ -0.38
TRAFD1-202ENST00000412615 SSU72P8A0A1W2PR75 194 aa12.69□□□□□ -0.38
TRAFD1-202ENST00000412615 POTEFA5A3E0 1075 aa12.69□□□□□ -0.38
TRAFD1-202ENST00000412615 POTEIP0CG38 1075 aa12.69□□□□□ -0.38
TRAFD1-202ENST00000412615 ERCC3P19447 782 aa12.69□□□□□ -0.38
TRAFD1-202ENST00000412615 VSNL1P62760 191 aa12.69□□□□□ -0.38
TRAFD1-202ENST00000412615 EDRF1Q3B7T1 1238 aa12.69□□□□□ -0.38
TRAFD1-202ENST00000412615 ARSHQ5FYA8 562 aa12.69□□□□□ -0.38
TRAFD1-202ENST00000412615 POTEGQ6S5H5 508 aa12.69□□□□□ -0.38
TRAFD1-202ENST00000412615 POTEEQ6S8J3 1075 aa12.69□□□□□ -0.38
TRAFD1-202ENST00000412615 TEX2Q8IWB9 1127 aa12.69□□□□□ -0.38
TRAFD1-202ENST00000412615 TRIM59Q8IWR1 403 aa12.69□□□□□ -0.38
TRAFD1-202ENST00000412615 MSL3Q8N5Y2 521 aaKnown RBP12.69□□□□□ -0.38
TRAFD1-202ENST00000412615 SYT2Q8N9I0 419 aaPredicted RBP12.69□□□□□ -0.38
TRAFD1-202ENST00000412615 SYN2Q92777 582 aaPredicted RBP12.69□□□□□ -0.38
TRAFD1-202ENST00000412615 PRMT6Q96LA8 375 aaPredicted RBP12.69□□□□□ -0.38
TRAFD1-202ENST00000412615 MMS19Q96T76 1030 aa12.69□□□□□ -0.38
TRAFD1-202ENST00000412615 FGFBP2Q9BYJ0 223 aa12.69□□□□□ -0.38
TRAFD1-202ENST00000412615 ZHX3Q9H4I2 956 aa12.69□□□□□ -0.38
TRAFD1-202ENST00000412615 SH2D4AQ9H788 454 aa12.69□□□□□ -0.38
TRAFD1-202ENST00000412615 ABCB6Q9NP58 842 aa12.69□□□□□ -0.38
TRAFD1-202ENST00000412615 CEP72Q9P209 647 aa12.69□□□□□ -0.38
TRAFD1-202ENST00000412615 L1RE1Q9UN81 338 aa12.69□□□□□ -0.38
TRAFD1-202ENST00000412615 JRKLQ9Y4A0 524 aa12.69□□□□□ -0.38
TRAFD1-202ENST00000412615 CETN3O15182 167 aa12.68□□□□□ -0.38
TRAFD1-202ENST00000412615 SRGAP2O75044 1071 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms