RNA–Protein interactions for RNA: ENST00000412568.6

PTPRF-204, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 4,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-204ENST00000412568 MAN2A1Q16706 1144 aa12.26□□□□□ -0.45
PTPRF-204ENST00000412568 SLC30A10Q6XR72 485 aa12.26□□□□□ -0.45
PTPRF-204ENST00000412568 FAM160B2Q86V87 743 aa12.26□□□□□ -0.45
PTPRF-204ENST00000412568 LDHDQ86WU2 507 aa12.26□□□□□ -0.45
PTPRF-204ENST00000412568 HAUS4Q9H6D7 363 aa12.26□□□□□ -0.45
PTPRF-204ENST00000412568 GNA14O95837 355 aa12.26□□□□□ -0.45
PTPRF-204ENST00000412568 USP14P54578 494 aa12.26□□□□□ -0.45
PTPRF-204ENST00000412568 PEX3P56589 373 aa12.26□□□□□ -0.45
PTPRF-204ENST00000412568 EHHADHQ08426 723 aa12.26□□□□□ -0.45
PTPRF-204ENST00000412568 MTMR2Q13614 643 aa12.26□□□□□ -0.45
PTPRF-204ENST00000412568 HHIPL2Q6UWX4 724 aa12.26□□□□□ -0.45
PTPRF-204ENST00000412568 TOGARAM2Q6ZUX3 1019 aa12.26□□□□□ -0.45
PTPRF-204ENST00000412568 PHLDB2Q86SQ0 1253 aa12.26□□□□□ -0.45
PTPRF-204ENST00000412568 CCDC114Q96M63 670 aa12.26□□□□□ -0.45
PTPRF-204ENST00000412568 MAGEF1Q9HAY2 307 aa12.26□□□□□ -0.45
PTPRF-204ENST00000412568 PARVGQ9HBI0 331 aa12.26□□□□□ -0.45
PTPRF-204ENST00000412568 FAM217BQ9NTX9 383 aaPredicted RBP12.26□□□□□ -0.45
PTPRF-204ENST00000412568 CEP83Q9Y592 693 aa12.26□□□□□ -0.45
PTPRF-204ENST00000412568 STK24Q9Y6E0 443 aa12.26□□□□□ -0.45
PTPRF-204ENST00000412568 ANKRD26Q9UPS8 1709 aa12.26□□□□□ -0.45
PTPRF-204ENST00000412568 SEC31AO94979 1220 aaKnown RBP12.26□□□□□ -0.45
PTPRF-204ENST00000412568 MAP2K1Q02750 393 aaPredicted RBP12.26□□□□□ -0.45
PTPRF-204ENST00000412568 Q3C1V9 767 aa12.26□□□□□ -0.45
PTPRF-204ENST00000412568 ZFPM1Q8IX07 1006 aa12.26□□□□□ -0.45
PTPRF-204ENST00000412568 ATRIPQ8WXE1 791 aa12.26□□□□□ -0.45
PTPRF-204ENST00000412568 OTUD5Q96G74 571 aa12.26□□□□□ -0.45
PTPRF-204ENST00000412568 NBPF3Q9H094 633 aa12.26□□□□□ -0.45
PTPRF-204ENST00000412568 IL17RBQ9NRM6 502 aa12.26□□□□□ -0.45
PTPRF-204ENST00000412568 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.26□□□□□ -0.45
PTPRF-204ENST00000412568 ADAMTS1Q9UHI8 967 aa12.26□□□□□ -0.45
PTPRF-204ENST00000412568 KCNK3O14649 394 aa12.26□□□□□ -0.45
PTPRF-204ENST00000412568 PTPAQ15257 358 aa12.26□□□□□ -0.45
PTPRF-204ENST00000412568 RPS6KA1Q15418 735 aa12.26□□□□□ -0.45
PTPRF-204ENST00000412568 GRIPAP1Q4V328 841 aa12.26□□□□□ -0.45
PTPRF-204ENST00000412568 MICALCLQ6ZW33 695 aa12.26□□□□□ -0.45
PTPRF-204ENST00000412568 DAAM2Q86T65 1068 aa12.26□□□□□ -0.45
PTPRF-204ENST00000412568 AGXT2Q9BYV1 514 aa12.26□□□□□ -0.45
PTPRF-204ENST00000412568 RASSF4Q9H2L5 321 aa12.26□□□□□ -0.45
PTPRF-204ENST00000412568 DDX4Q9NQI0 724 aaKnown RBP12.26□□□□□ -0.45
PTPRF-204ENST00000412568 RNF146Q9NTX7 359 aa12.26□□□□□ -0.45
PTPRF-204ENST00000412568 ZEB2O60315 1214 aa12.25□□□□□ -0.45
PTPRF-204ENST00000412568 GABPB1Q06547 395 aaPredicted RBP12.25□□□□□ -0.45
PTPRF-204ENST00000412568 STK4Q13043 487 aa12.25□□□□□ -0.45
PTPRF-204ENST00000412568 MTMR1Q13613 665 aa12.25□□□□□ -0.45
PTPRF-204ENST00000412568 RSBN1LQ6PCB5 846 aaPredicted RBP12.25□□□□□ -0.45
PTPRF-204ENST00000412568 ST7Q9NRC1 585 aa12.25□□□□□ -0.45
PTPRF-204ENST00000412568 CDC23Q9UJX2 597 aa12.25□□□□□ -0.45
PTPRF-204ENST00000412568 PRR12Q9ULL5 1215 aa12.25□□□□□ -0.45
PTPRF-204ENST00000412568 SUGT1Q9Y2Z0 365 aa12.25□□□□□ -0.45
PTPRF-204ENST00000412568 MYO3BQ8WXR4 1341 aa12.25□□□□□ -0.45
PTPRF-204ENST00000412568 INO80B-WBP1J3KQ70 363 aa12.25□□□□□ -0.45
PTPRF-204ENST00000412568 OAS2P29728 719 aaKnown RBP12.25□□□□□ -0.45
PTPRF-204ENST00000412568 EIF4A3P38919 411 aaKnown RBP12.25□□□□□ -0.45
PTPRF-204ENST00000412568 SF3A3Q12874 501 aaKnown RBP eCLIP12.25□□□□□ -0.455e-9■■□□□ 12.7
PTPRF-204ENST00000412568 FAM47CQ5HY64 1035 aa12.25□□□□□ -0.45
PTPRF-204ENST00000412568 PDXDC2PQ6P474 469 aa12.25□□□□□ -0.45
PTPRF-204ENST00000412568 DPP9Q86TI2 863 aa12.25□□□□□ -0.45
PTPRF-204ENST00000412568 PRPF38AQ8NAV1 312 aaKnown RBP12.25□□□□□ -0.45
PTPRF-204ENST00000412568 RNF169Q8NCN4 708 aa12.25□□□□□ -0.45
PTPRF-204ENST00000412568 IRX2Q9BZI1 471 aaPredicted RBP12.25□□□□□ -0.45
PTPRF-204ENST00000412568 INO80BQ9C086 356 aaPredicted RBP12.25□□□□□ -0.45
PTPRF-204ENST00000412568 NOD1Q9Y239 953 aa12.25□□□□□ -0.45
PTPRF-204ENST00000412568 GFPT2O94808 682 aa12.25□□□□□ -0.45
PTPRF-204ENST00000412568 CNGA1P29973 690 aa12.25□□□□□ -0.45
PTPRF-204ENST00000412568 ACTN2P35609 894 aa12.25□□□□□ -0.45
PTPRF-204ENST00000412568 PPP1R7Q15435 360 aa12.25□□□□□ -0.45
PTPRF-204ENST00000412568 UNC13DQ70J99 1090 aa12.25□□□□□ -0.45
PTPRF-204ENST00000412568 KIFAP3Q92845 792 aa12.25□□□□□ -0.45
PTPRF-204ENST00000412568 MRRFQ96E11 262 aaKnown RBP12.25□□□□□ -0.45
PTPRF-204ENST00000412568 IPO5O00410 1097 aaKnown RBP12.24□□□□□ -0.45
PTPRF-204ENST00000412568 TNNC1P63316 161 aa12.24□□□□□ -0.45
PTPRF-204ENST00000412568 ANGEL2Q5VTE6 544 aaKnown RBP12.24□□□□□ -0.45
PTPRF-204ENST00000412568 FBXO38Q6PIJ6 1188 aa12.24□□□□□ -0.45
PTPRF-204ENST00000412568 MB21D1Q8N884 522 aa12.24□□□□□ -0.45
PTPRF-204ENST00000412568 SLC7A3Q8WY07 619 aa12.24□□□□□ -0.45
PTPRF-204ENST00000412568 TRIM9Q9C026 710 aa12.24□□□□□ -0.45
PTPRF-204ENST00000412568 KMT5AQ9NQR1 393 aa12.24□□□□□ -0.45
PTPRF-204ENST00000412568 HERC5Q9UII4 1024 aaKnown RBP12.24□□□□□ -0.45
PTPRF-204ENST00000412568 FAM205AQ6ZU69 1335 aa12.24□□□□□ -0.45
PTPRF-204ENST00000412568 COASYQ13057 564 aa12.24□□□□□ -0.45
PTPRF-204ENST00000412568 AP3B2Q13367 1082 aa12.24□□□□□ -0.45
PTPRF-204ENST00000412568 ILDR1Q86SU0 546 aaPredicted RBP12.24□□□□□ -0.45
PTPRF-204ENST00000412568 RAD54LQ92698 747 aa12.24□□□□□ -0.45
PTPRF-204ENST00000412568 RIC8AQ9NPQ8 531 aa12.24□□□□□ -0.45
PTPRF-204ENST00000412568 MON2Q7Z3U7 1717 aa12.24□□□□□ -0.45
PTPRF-204ENST00000412568 CA8P35219 290 aa12.24□□□□□ -0.45
PTPRF-204ENST00000412568 CCZ1BP86790 482 aa12.24□□□□□ -0.45
PTPRF-204ENST00000412568 CCZ1P86791 482 aaPredicted RBP12.24□□□□□ -0.45
PTPRF-204ENST00000412568 PKN1Q16512 942 aa12.24□□□□□ -0.45
PTPRF-204ENST00000412568 NBPF9Q3BBW0 867 aa12.24□□□□□ -0.45
PTPRF-204ENST00000412568 ATP6V0A1Q93050 837 aa12.24□□□□□ -0.45
PTPRF-204ENST00000412568 METTL14Q9HCE5 456 aaKnown RBP12.24□□□□□ -0.45
PTPRF-204ENST00000412568 TUBE1Q9UJT0 475 aa12.24□□□□□ -0.45
PTPRF-204ENST00000412568 KIF13AQ9H1H9 1805 aa12.24□□□□□ -0.45
PTPRF-204ENST00000412568 EBAG9O00559 213 aa12.23□□□□□ -0.45
PTPRF-204ENST00000412568 MFAP3LO75121 409 aa12.23□□□□□ -0.45
PTPRF-204ENST00000412568 MYCP01106 439 aaPredicted RBP12.23□□□□□ -0.45
PTPRF-204ENST00000412568 SRGAP2CP0DJJ0 459 aa12.23□□□□□ -0.45
PTPRF-204ENST00000412568 GBP2P32456 591 aaPredicted RBP12.23□□□□□ -0.45
PTPRF-204ENST00000412568 PRPHP41219 470 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms