RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 Q3C1V9 767 aa9.89□□□□□ -0.83
PBRM1-208ENST00000410007 RINT1Q6NUQ1 792 aa9.89□□□□□ -0.83
PBRM1-208ENST00000410007 CTAGE3PQ8IX95 158 aa9.89□□□□□ -0.83
PBRM1-208ENST00000410007 MB21D2Q8IYB1 491 aaPredicted RBP9.89□□□□□ -0.83
PBRM1-208ENST00000410007 SMYD4Q8IYR2 804 aaPredicted RBP9.89□□□□□ -0.83
PBRM1-208ENST00000410007 MCPH1Q8NEM0 835 aa9.89□□□□□ -0.83
PBRM1-208ENST00000410007 NSUN6Q8TEA1 469 aaKnown RBP9.89□□□□□ -0.83
PBRM1-208ENST00000410007 FAM20AQ96MK3 541 aa9.89□□□□□ -0.83
PBRM1-208ENST00000410007 TYW1Q9NV66 732 aaKnown RBP9.89□□□□□ -0.83
PBRM1-208ENST00000410007 DIP2CQ9Y2E4 1556 aa9.89□□□□□ -0.83
PBRM1-208ENST00000410007 AGLP35573 1532 aa9.89□□□□□ -0.83
PBRM1-208ENST00000410007 CEP152O94986 1710 aa9.89□□□□□ -0.83
PBRM1-208ENST00000410007 I3L4J1 428 aa9.89□□□□□ -0.83
PBRM1-208ENST00000410007 ORC4O43929 436 aa9.89□□□□□ -0.83
PBRM1-208ENST00000410007 GBP1P32455 592 aa9.89□□□□□ -0.83
PBRM1-208ENST00000410007 RNASELQ05823 741 aaKnown RBP9.89□□□□□ -0.83
PBRM1-208ENST00000410007 BRD3Q15059 726 aa9.89□□□□□ -0.83
PBRM1-208ENST00000410007 RSRC2Q7L4I2 434 aaKnown RBP9.89□□□□□ -0.83
PBRM1-208ENST00000410007 NEDD1Q8NHV4 660 aa9.89□□□□□ -0.83
PBRM1-208ENST00000410007 RUNDC3BQ96NL0 473 aa9.89□□□□□ -0.83
PBRM1-208ENST00000410007 IQCA1LA6NCM1 817 aa9.89□□□□□ -0.83
PBRM1-208ENST00000410007 NDUFAB1O14561 156 aa9.89□□□□□ -0.83
PBRM1-208ENST00000410007 THAP12O43422 761 aa9.89□□□□□ -0.83
PBRM1-208ENST00000410007 MED7O43513 233 aa9.89□□□□□ -0.83
PBRM1-208ENST00000410007 BIRC2Q13490 618 aa9.89□□□□□ -0.83
PBRM1-208ENST00000410007 MTMR1Q13613 665 aa9.89□□□□□ -0.83
PBRM1-208ENST00000410007 TOB2Q14106 344 aaPredicted RBP9.89□□□□□ -0.83
PBRM1-208ENST00000410007 GRAMD1CQ8IYS0 662 aa9.89□□□□□ -0.83
PBRM1-208ENST00000410007 ZNF34Q8IZ26 560 aa9.89□□□□□ -0.83
PBRM1-208ENST00000410007 PRPF38AQ8NAV1 312 aaKnown RBP9.89□□□□□ -0.83
PBRM1-208ENST00000410007 PAGE5Q96GU1 130 aa9.89□□□□□ -0.83
PBRM1-208ENST00000410007 CHAMP1Q96JM3 812 aa9.89□□□□□ -0.83
PBRM1-208ENST00000410007 KRT12Q99456 494 aa9.89□□□□□ -0.83
PBRM1-208ENST00000410007 PCIF1Q9H4Z3 704 aa9.89□□□□□ -0.83
PBRM1-208ENST00000410007 GSG1L2A8MUP6 293 aa9.88□□□□□ -0.83
PBRM1-208ENST00000410007 WDR64B1ANS9 1081 aa9.88□□□□□ -0.83
PBRM1-208ENST00000410007 COPB2P35606 906 aa9.88□□□□□ -0.83
PBRM1-208ENST00000410007 KRT76Q01546 638 aa9.88□□□□□ -0.83
PBRM1-208ENST00000410007 LMNB2Q03252 620 aa9.88□□□□□ -0.83
PBRM1-208ENST00000410007 SNRNP48Q6IEG0 339 aaKnown RBP9.88□□□□□ -0.83
PBRM1-208ENST00000410007 SPATA24Q86W54 205 aa9.88□□□□□ -0.83
PBRM1-208ENST00000410007 SLC44A5Q8NCS7 719 aa9.88□□□□□ -0.83
PBRM1-208ENST00000410007 TSC1Q92574 1164 aa9.88□□□□□ -0.83
PBRM1-208ENST00000410007 EPSTI1Q96J88 318 aa9.88□□□□□ -0.83
PBRM1-208ENST00000410007 ZFP91Q96JP5 570 aaPredicted RBP9.88□□□□□ -0.83
PBRM1-208ENST00000410007 ZNF233A6NK53 670 aa9.88□□□□□ -0.83
PBRM1-208ENST00000410007 F5H6K3 240 aa9.88□□□□□ -0.83
PBRM1-208ENST00000410007 PFDN6O15212 129 aa9.88□□□□□ -0.83
PBRM1-208ENST00000410007 LDHAP00338 332 aaKnown RBP9.88□□□□□ -0.83
PBRM1-208ENST00000410007 MAN1A1P33908 653 aa9.88□□□□□ -0.83
PBRM1-208ENST00000410007 KLRC3Q07444 240 aa9.88□□□□□ -0.83
PBRM1-208ENST00000410007 SPP2Q13103 211 aa9.88□□□□□ -0.83
PBRM1-208ENST00000410007 CTTNQ14247 550 aaKnown RBP9.88□□□□□ -0.83
PBRM1-208ENST00000410007 CYB5R4Q7L1T6 521 aa9.88□□□□□ -0.83
PBRM1-208ENST00000410007 NEK9Q8TD19 979 aa9.88□□□□□ -0.83
PBRM1-208ENST00000410007 ZBTB9Q96C00 473 aa9.88□□□□□ -0.83
PBRM1-208ENST00000410007 SPON1Q9HCB6 807 aa9.88□□□□□ -0.83
PBRM1-208ENST00000410007 RNF146Q9NTX7 359 aa9.88□□□□□ -0.83
PBRM1-208ENST00000410007 E9PCH4 1651 aa9.88□□□□□ -0.83
PBRM1-208ENST00000410007 SNAP25P60880 206 aa9.88□□□□□ -0.83
PBRM1-208ENST00000410007 BBS5Q8N3I7 341 aa9.88□□□□□ -0.83
PBRM1-208ENST00000410007 ZNF579Q8NAF0 562 aaKnown RBP9.88□□□□□ -0.83
PBRM1-208ENST00000410007 FAM149B1Q96BN6 582 aa9.88□□□□□ -0.83
PBRM1-208ENST00000410007 ZNRF3Q9ULT6 936 aa9.88□□□□□ -0.83
PBRM1-208ENST00000410007 ZNF148Q9UQR1 794 aa9.88□□□□□ -0.83
PBRM1-208ENST00000410007 TYW5A2RUC4 315 aaKnown RBP9.88□□□□□ -0.83
PBRM1-208ENST00000410007 EIF3CLB5ME19 914 aaKnown RBP9.88□□□□□ -0.83
PBRM1-208ENST00000410007 GNAT1P11488 350 aa9.88□□□□□ -0.83
PBRM1-208ENST00000410007 NME8Q8N427 588 aa9.88□□□□□ -0.83
PBRM1-208ENST00000410007 TBC1D16Q8TBP0 767 aa9.88□□□□□ -0.83
PBRM1-208ENST00000410007 ZNF653Q96CK0 615 aa9.88□□□□□ -0.83
PBRM1-208ENST00000410007 EIF3CQ99613 913 aaKnown RBP9.88□□□□□ -0.83
PBRM1-208ENST00000410007 RPF1Q9H9Y2 349 aaKnown RBP9.88□□□□□ -0.83
PBRM1-208ENST00000410007 LY9Q9HBG7 655 aa9.88□□□□□ -0.83
PBRM1-208ENST00000410007 RAVER2Q9HCJ3 691 aaKnown RBP9.88□□□□□ -0.83
PBRM1-208ENST00000410007 PFDN4Q9NQP4 134 aa9.88□□□□□ -0.83
PBRM1-208ENST00000410007 GCNT4Q9P109 453 aa9.88□□□□□ -0.83
PBRM1-208ENST00000410007 CD163L1Q9NR16 1453 aa9.88□□□□□ -0.83
PBRM1-208ENST00000410007 CIB2O75838 187 aa9.87□□□□□ -0.83
PBRM1-208ENST00000410007 CAMTA2O94983 1202 aa9.87□□□□□ -0.83
PBRM1-208ENST00000410007 PRELPP51888 382 aa9.87□□□□□ -0.83
PBRM1-208ENST00000410007 RASSF7Q02833 373 aa9.87□□□□□ -0.83
PBRM1-208ENST00000410007 NEDD9Q14511 834 aa9.87□□□□□ -0.83
PBRM1-208ENST00000410007 MESDQ14696 234 aa9.87□□□□□ -0.83
PBRM1-208ENST00000410007 STRIP1Q5VSL9 837 aa9.87□□□□□ -0.83
PBRM1-208ENST00000410007 PRR5LQ6MZQ0 368 aa9.87□□□□□ -0.83
PBRM1-208ENST00000410007 KIAA1841Q6NSI8 718 aa9.87□□□□□ -0.83
PBRM1-208ENST00000410007 MARCH10Q8NA82 808 aaPredicted RBP9.87□□□□□ -0.83
PBRM1-208ENST00000410007 MRPL47Q9HD33 250 aaKnown RBP9.87□□□□□ -0.83
PBRM1-208ENST00000410007 CLTCQ00610 1675 aaKnown RBP9.87□□□□□ -0.83
PBRM1-208ENST00000410007 ATP8B3O60423 1300 aa9.87□□□□□ -0.83
PBRM1-208ENST00000410007 FAM196BA6NMK8 535 aa9.87□□□□□ -0.83
PBRM1-208ENST00000410007 RGS16O15492 202 aaPredicted RBP9.87□□□□□ -0.83
PBRM1-208ENST00000410007 ZBED6P86452 979 aa9.87□□□□□ -0.83
PBRM1-208ENST00000410007 SLFNL1Q499Z3 407 aa9.87□□□□□ -0.83
PBRM1-208ENST00000410007 ATG9AQ7Z3C6 839 aa9.87□□□□□ -0.83
PBRM1-208ENST00000410007 ANKRD13CQ8N6S4 541 aa9.87□□□□□ -0.83
PBRM1-208ENST00000410007 PASKQ96RG2 1323 aa9.87□□□□□ -0.83
PBRM1-208ENST00000410007 FAM170AA1A519 330 aa9.87□□□□□ -0.83
PBRM1-208ENST00000410007 SRGAP2CP0DJJ0 459 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms