RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 LGALS2P05162 132 aa16.69■□□□□ 0.26
MCF2L-210ENST00000409954 RSPH10BP0C881 870 aa16.69■□□□□ 0.26
MCF2L-210ENST00000409954 WDR5P61964 334 aaKnown RBP16.69■□□□□ 0.26
MCF2L-210ENST00000409954 MRPS5P82675 430 aaKnown RBP16.69■□□□□ 0.26
MCF2L-210ENST00000409954 CCDC85BQ15834 202 aaPredicted RBP16.69■□□□□ 0.26
MCF2L-210ENST00000409954 GPRASP2Q96D09 838 aa16.69■□□□□ 0.26
MCF2L-210ENST00000409954 RAD9AQ99638 391 aa16.69■□□□□ 0.26
MCF2L-210ENST00000409954 GPR20Q99678 358 aa16.69■□□□□ 0.26
MCF2L-210ENST00000409954 BCAS3Q9H6U6 928 aa16.69■□□□□ 0.26
MCF2L-210ENST00000409954 RBM28Q9NW13 759 aaKnown RBP16.69■□□□□ 0.26
MCF2L-210ENST00000409954 ZNF215Q9UL58 517 aaPredicted RBP16.69■□□□□ 0.26
MCF2L-210ENST00000409954 LGR5O75473 907 aa16.68■□□□□ 0.26
MCF2L-210ENST00000409954 SMIM10L2AP0DMW4 78 aa16.68■□□□□ 0.26
MCF2L-210ENST00000409954 SMIM10L2BP0DMW5 78 aa16.68■□□□□ 0.26
MCF2L-210ENST00000409954 HOXC8P31273 242 aa16.68■□□□□ 0.26
MCF2L-210ENST00000409954 THPOP40225 353 aa16.68■□□□□ 0.26
MCF2L-210ENST00000409954 TAP1Q03518 808 aa16.68■□□□□ 0.26
MCF2L-210ENST00000409954 SEMA3FQ13275 785 aa16.68■□□□□ 0.26
MCF2L-210ENST00000409954 TRAF7Q6Q0C0 670 aa16.68■□□□□ 0.26
MCF2L-210ENST00000409954 DHX32Q7L7V1 743 aaKnown RBP16.68■□□□□ 0.26
MCF2L-210ENST00000409954 CCDC82Q8N4S0 544 aa16.68■□□□□ 0.26
MCF2L-210ENST00000409954 ASB2Q96Q27 587 aa16.68■□□□□ 0.26
MCF2L-210ENST00000409954 THEGQ9P2T0 379 aa16.68■□□□□ 0.26
MCF2L-210ENST00000409954 SPDYE3A6NKU9 549 aa16.67■□□□□ 0.26
MCF2L-210ENST00000409954 RXRAP19793 462 aa16.67■□□□□ 0.26
MCF2L-210ENST00000409954 EXOSC10Q01780 885 aaKnown RBP16.67■□□□□ 0.26
MCF2L-210ENST00000409954 HIC1Q14526 733 aa16.67■□□□□ 0.26
MCF2L-210ENST00000409954 KRT32Q14532 448 aa16.67■□□□□ 0.26
MCF2L-210ENST00000409954 TMTC3Q6ZXV5 915 aa16.67■□□□□ 0.26
MCF2L-210ENST00000409954 CMTR1Q8N1G2 835 aaKnown RBP16.67■□□□□ 0.26
MCF2L-210ENST00000409954 SEPT1Q8WYJ6 367 aa16.67■□□□□ 0.26
MCF2L-210ENST00000409954 EHMT1Q9H9B1 1298 aa16.67■□□□□ 0.26
MCF2L-210ENST00000409954 BAZ2BQ9UIF8 2168 aaKnown RBP16.67■□□□□ 0.26
MCF2L-210ENST00000409954 KIAA1217Q5T5P2 1943 aa16.66■□□□□ 0.26
MCF2L-210ENST00000409954 TREHO43280 583 aa16.66■□□□□ 0.26
MCF2L-210ENST00000409954 GJB5O95377 273 aa16.66■□□□□ 0.26
MCF2L-210ENST00000409954 HMGB1P09429 215 aaKnown RBP16.66■□□□□ 0.26
MCF2L-210ENST00000409954 MYO9BQ13459 2157 aa16.66■□□□□ 0.26
MCF2L-210ENST00000409954 AAK1Q2M2I8 961 aa16.66■□□□□ 0.26
MCF2L-210ENST00000409954 ARNTL2Q8WYA1 636 aa16.66■□□□□ 0.26
MCF2L-210ENST00000409954 WNT8BQ93098 351 aa16.66■□□□□ 0.26
MCF2L-210ENST00000409954 LRRC2Q9BYS8 371 aa16.66■□□□□ 0.26
MCF2L-210ENST00000409954 PRDM6Q9NQX0 595 aa16.66■□□□□ 0.26
MCF2L-210ENST00000409954 SETD4Q9NVD3 440 aa16.66■□□□□ 0.26
MCF2L-210ENST00000409954 LMCD1Q9NZU5 365 aa16.66■□□□□ 0.26
MCF2L-210ENST00000409954 PCDHA6Q9UN73 950 aa16.66■□□□□ 0.26
MCF2L-210ENST00000409954 PCDHA8Q9Y5H6 950 aa16.66■□□□□ 0.26
MCF2L-210ENST00000409954 UBIAD1Q9Y5Z9 338 aa16.66■□□□□ 0.26
MCF2L-210ENST00000409954 MTCH2Q9Y6C9 303 aa16.66■□□□□ 0.26
MCF2L-210ENST00000409954 MYH6P13533 1939 aa16.66■□□□□ 0.26
MCF2L-210ENST00000409954 NRCAMQ92823 1304 aa16.66■□□□□ 0.26
MCF2L-210ENST00000409954 FOSP01100 380 aaPredicted RBP16.65■□□□□ 0.26
MCF2L-210ENST00000409954 ADAM17P78536 824 aa16.65■□□□□ 0.26
MCF2L-210ENST00000409954 PLEKHG4Q58EX7 1191 aa16.65■□□□□ 0.26
MCF2L-210ENST00000409954 UTP14CQ5TAP6 766 aaKnown RBP16.65■□□□□ 0.26
MCF2L-210ENST00000409954 APOA5Q6Q788 366 aa16.65■□□□□ 0.26
MCF2L-210ENST00000409954 DBF4BQ8NFT6 615 aa16.65■□□□□ 0.26
MCF2L-210ENST00000409954 TNPO1Q92973 898 aaKnown RBP16.65■□□□□ 0.26
MCF2L-210ENST00000409954 GLT8D2Q9H1C3 349 aa16.65■□□□□ 0.26
MCF2L-210ENST00000409954 CERS4Q9HA82 394 aa16.65■□□□□ 0.26
MCF2L-210ENST00000409954 INSL6Q9Y581 213 aa16.65■□□□□ 0.26
MCF2L-210ENST00000409954 hCG_1984214I3L0E3 225 aa16.64■□□□□ 0.25
MCF2L-210ENST00000409954 RFXAPO00287 272 aa16.64■□□□□ 0.25
MCF2L-210ENST00000409954 ZBTB43O43298 467 aa16.64■□□□□ 0.25
MCF2L-210ENST00000409954 ATP9AO75110 1047 aa16.64■□□□□ 0.25
MCF2L-210ENST00000409954 AMHP03971 560 aa16.64■□□□□ 0.25
MCF2L-210ENST00000409954 ITGB5P18084 799 aa16.64■□□□□ 0.25
MCF2L-210ENST00000409954 COL9A3Q14050 684 aaPredicted RBP16.64■□□□□ 0.25
MCF2L-210ENST00000409954 MBTPS1Q14703 1052 aa16.64■□□□□ 0.25
MCF2L-210ENST00000409954 HEATR3Q7Z4Q2 680 aa16.64■□□□□ 0.25
MCF2L-210ENST00000409954 RPAINQ86UA6 219 aa16.64■□□□□ 0.25
MCF2L-210ENST00000409954 MICU3Q86XE3 530 aa16.64■□□□□ 0.25
MCF2L-210ENST00000409954 ZNF713Q8N859 430 aaPredicted RBP16.64■□□□□ 0.25
MCF2L-210ENST00000409954 IL27Q8NEV9 243 aa16.64■□□□□ 0.25
MCF2L-210ENST00000409954 SEPT8Q92599 483 aa16.64■□□□□ 0.25
MCF2L-210ENST00000409954 JADE2Q9NQC1 790 aa16.64■□□□□ 0.25
MCF2L-210ENST00000409954 V9GY48 417 aaPredicted RBP16.64■□□□□ 0.25
MCF2L-210ENST00000409954 hCG_1642624A0A1W2PR95 340 aa16.63■□□□□ 0.25
MCF2L-210ENST00000409954 CDC45O75419 566 aa16.63■□□□□ 0.25
MCF2L-210ENST00000409954 KCNA2P16389 499 aa16.63■□□□□ 0.25
MCF2L-210ENST00000409954 TCF7P36402 384 aaPredicted RBP16.63■□□□□ 0.25
MCF2L-210ENST00000409954 RCAN1P53805 252 aa16.63■□□□□ 0.25
MCF2L-210ENST00000409954 DEFB103AP81534 67 aa16.63■□□□□ 0.25
MCF2L-210ENST00000409954 MTMR1Q13613 665 aa16.63■□□□□ 0.25
MCF2L-210ENST00000409954 FAM26DQ5JW98 314 aa16.63■□□□□ 0.25
MCF2L-210ENST00000409954 TGS1Q96RS0 853 aaKnown RBP16.63■□□□□ 0.25
MCF2L-210ENST00000409954 SMARCAD1Q9H4L7 1026 aa16.63■□□□□ 0.25
MCF2L-210ENST00000409954 RIC8AQ9NPQ8 531 aa16.63■□□□□ 0.25
MCF2L-210ENST00000409954 ERAP1Q9NZ08 941 aa16.63■□□□□ 0.25
MCF2L-210ENST00000409954 COG5Q9UP83 839 aa16.63■□□□□ 0.25
MCF2L-210ENST00000409954 CCDC196A0A1B0GTZ2 297 aa16.62■□□□□ 0.25
MCF2L-210ENST00000409954 GSTTP1A0A1W2PQM5 241 aa16.62■□□□□ 0.25
MCF2L-210ENST00000409954 RPLP2P05387 115 aaKnown RBP16.62■□□□□ 0.25
MCF2L-210ENST00000409954 ERVK-21P61565 698 aa16.62■□□□□ 0.25
MCF2L-210ENST00000409954 ARHGAP4P98171 946 aa16.62■□□□□ 0.25
MCF2L-210ENST00000409954 SP4Q02446 784 aa16.62■□□□□ 0.25
MCF2L-210ENST00000409954 UBE2SQ16763 222 aa16.62■□□□□ 0.25
MCF2L-210ENST00000409954 RTN1Q16799 776 aa16.62■□□□□ 0.25
MCF2L-210ENST00000409954 TCTN1Q2MV58 587 aa16.62■□□□□ 0.25
MCF2L-210ENST00000409954 PPP1R18Q6NYC8 613 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms