RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 USP17L18D6R9N7 530 aa8.4□□□□□ -1.07
CXCR4-202ENST00000409817 USP17L22D6RA61 530 aa8.4□□□□□ -1.07
CXCR4-202ENST00000409817 USP17L17D6RBQ6 530 aa8.4□□□□□ -1.07
CXCR4-202ENST00000409817 USP17L19D6RCP7 530 aa8.4□□□□□ -1.07
CXCR4-202ENST00000409817 USP17L20D6RJB6 530 aa8.4□□□□□ -1.07
CXCR4-202ENST00000409817 H7C1D1 291 aa8.4□□□□□ -1.07
CXCR4-202ENST00000409817 GDF11O95390 407 aa8.4□□□□□ -1.07
CXCR4-202ENST00000409817 CYP3A7P24462 503 aa8.4□□□□□ -1.07
CXCR4-202ENST00000409817 SLC16A2P36021 539 aa8.4□□□□□ -1.07
CXCR4-202ENST00000409817 TECP42680 631 aa8.4□□□□□ -1.07
CXCR4-202ENST00000409817 PTPN5P54829 565 aa8.4□□□□□ -1.07
CXCR4-202ENST00000409817 MCCD1P59942 119 aaPredicted RBP8.4□□□□□ -1.07
CXCR4-202ENST00000409817 MAP3K10Q02779 954 aa8.4□□□□□ -1.07
CXCR4-202ENST00000409817 USP17L24Q0WX57 530 aa8.4□□□□□ -1.07
CXCR4-202ENST00000409817 TNFAIP1Q13829 316 aa8.4□□□□□ -1.07
CXCR4-202ENST00000409817 TPD52L1Q16890 204 aaPredicted RBP8.4□□□□□ -1.07
CXCR4-202ENST00000409817 KRT79Q5XKE5 535 aa8.4□□□□□ -1.07
CXCR4-202ENST00000409817 SPECC1LQ69YQ0 1117 aa8.4□□□□□ -1.07
CXCR4-202ENST00000409817 CIAPIN1Q6FI81 312 aa8.4□□□□□ -1.07
CXCR4-202ENST00000409817 CNNM4Q6P4Q7 775 aa8.4□□□□□ -1.07
CXCR4-202ENST00000409817 FCHSD1Q86WN1 690 aa8.4□□□□□ -1.07
CXCR4-202ENST00000409817 FBXO11Q86XK2 927 aa8.4□□□□□ -1.07
CXCR4-202ENST00000409817 NOC3LQ8WTT2 800 aaKnown RBP8.4□□□□□ -1.07
CXCR4-202ENST00000409817 MBOAT7Q96N66 472 aa8.4□□□□□ -1.07
CXCR4-202ENST00000409817 TAOK3Q9H2K8 898 aa8.4□□□□□ -1.07
CXCR4-202ENST00000409817 TMEM260Q9NX78 707 aa8.4□□□□□ -1.07
CXCR4-202ENST00000409817 DDX25Q9UHL0 483 aaKnown RBP8.4□□□□□ -1.07
CXCR4-202ENST00000409817 TMX2Q9Y320 296 aa8.4□□□□□ -1.07
CXCR4-202ENST00000409817 R3HCC1Q9Y3T6 440 aaKnown RBP8.4□□□□□ -1.07
CXCR4-202ENST00000409817 KDM3AQ9Y4C1 1321 aa8.4□□□□□ -1.07
CXCR4-202ENST00000409817 CNTNAP1P78357 1384 aa8.39□□□□□ -1.07
CXCR4-202ENST00000409817 PVALEFA0A1B0GWK0 134 aa8.39□□□□□ -1.07
CXCR4-202ENST00000409817 TCP10L2B9ZVM9 353 aa8.39□□□□□ -1.07
CXCR4-202ENST00000409817 PSMA7O14818 248 aa8.39□□□□□ -1.07
CXCR4-202ENST00000409817 TBX3O15119 743 aa8.39□□□□□ -1.07
CXCR4-202ENST00000409817 S1PR4O95977 384 aa8.39□□□□□ -1.07
CXCR4-202ENST00000409817 PLCG1P19174 1290 aa8.39□□□□□ -1.07
CXCR4-202ENST00000409817 CDC25AP30304 524 aa8.39□□□□□ -1.07
CXCR4-202ENST00000409817 TXKP42681 527 aa8.39□□□□□ -1.07
CXCR4-202ENST00000409817 STAT2P52630 851 aa8.39□□□□□ -1.07
CXCR4-202ENST00000409817 NR1I3Q14994 352 aa8.39□□□□□ -1.07
CXCR4-202ENST00000409817 SLFN12Q8IYM2 578 aa8.39□□□□□ -1.07
CXCR4-202ENST00000409817 ADSSL1Q8N142 457 aa8.39□□□□□ -1.07
CXCR4-202ENST00000409817 GIMAP8Q8ND71 665 aaPredicted RBP8.39□□□□□ -1.07
CXCR4-202ENST00000409817 FOXJ1Q92949 421 aa8.39□□□□□ -1.07
CXCR4-202ENST00000409817 DHTKD1Q96HY7 919 aaPredicted RBP8.39□□□□□ -1.07
CXCR4-202ENST00000409817 CDK5RAP3Q96JB5 506 aa8.39□□□□□ -1.07
CXCR4-202ENST00000409817 MED15Q96RN5 788 aa8.39□□□□□ -1.07
CXCR4-202ENST00000409817 TRIM9Q9C026 710 aa8.39□□□□□ -1.07
CXCR4-202ENST00000409817 NT5C3AQ9H0P0 336 aa8.39□□□□□ -1.07
CXCR4-202ENST00000409817 BLZF1Q9H2G9 400 aa8.39□□□□□ -1.07
CXCR4-202ENST00000409817 ZBTB21Q9ULJ3 1066 aa8.39□□□□□ -1.07
CXCR4-202ENST00000409817 LTBP3Q9NS15 1303 aa8.39□□□□□ -1.07
CXCR4-202ENST00000409817 FER1L6Q2WGJ9 1857 aa8.39□□□□□ -1.07
CXCR4-202ENST00000409817 COL4A5P29400 1685 aa8.39□□□□□ -1.07
CXCR4-202ENST00000409817 CLRN2A0PK11 232 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 BICDL2A1A5D9 508 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 PP2D1A8MPX8 630 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 TMEM232C9JQI7 657 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 SLC37A4O43826 429 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 KLRC4O43908 158 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 TDP2O95551 362 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 ASNSP08243 561 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 CXCL9Q07325 125 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 TBX2Q13207 712 aaPredicted RBP8.38□□□□□ -1.07
CXCR4-202ENST00000409817 HYIQ5T013 277 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 KLHL10Q6JEL2 608 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 ARMCX5Q6P1M9 558 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 FOXR2Q6PJQ5 311 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 SV2BQ7L1I2 683 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 FAM160B2Q86V87 743 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 TRMT44Q8IYL2 757 aaKnown RBP8.38□□□□□ -1.07
CXCR4-202ENST00000409817 CHURC1Q8WUH1 139 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 BAP1Q92560 729 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 STAMQ92783 540 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 DPF2Q92785 391 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 MMTAG2Q9BU76 263 aaKnown RBP8.38□□□□□ -1.07
CXCR4-202ENST00000409817 ANO3Q9BYT9 981 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 TMX1Q9H3N1 280 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 SAMSN1Q9NSI8 373 aaKnown RBP8.38□□□□□ -1.07
CXCR4-202ENST00000409817 LIMA1Q9UHB6 759 aaKnown RBP8.38□□□□□ -1.07
CXCR4-202ENST00000409817 PAXBP1Q9Y5B6 917 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 CD2APQ9Y5K6 639 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 IVNS1ABPQ9Y6Y0 642 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 ITIH6Q6UXX5 1313 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 BRCA1P38398 1863 aaKnown RBP8.38□□□□□ -1.07
CXCR4-202ENST00000409817 SPDYE3A6NKU9 549 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 MEIS2O14770 477 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 EDIL3O43854 480 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 MARCH6O60337 910 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 EEF1GP26641 437 aaKnown RBP8.38□□□□□ -1.07
CXCR4-202ENST00000409817 CASP1P29466 404 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 ZNF280AP59817 542 aaPredicted RBP8.38□□□□□ -1.07
CXCR4-202ENST00000409817 CLDN10P78369 228 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 IKQ13123 557 aaPredicted RBP8.38□□□□□ -1.07
CXCR4-202ENST00000409817 UBE2SQ16763 222 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 APTXQ7Z2E3 356 aaKnown RBP8.38□□□□□ -1.07
CXCR4-202ENST00000409817 ZBTB33Q86T24 672 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 CCAR2Q8N163 923 aaKnown RBP8.38□□□□□ -1.07
CXCR4-202ENST00000409817 C17orf53Q8N3J3 647 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms