RNA–Protein interactions for RNA: ENST00000409776.6

RGPD1-202, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 6,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-202ENST00000409776 UBXN1Q04323 297 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 NCAPHQ15003 741 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 LRRC36Q1X8D7 754 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 C4orf46Q504U0 113 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 TCP11X2Q5H9J9 407 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 TMEM67Q5HYA8 995 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 ARMC3Q5W041 872 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 BSPRYQ5W0U4 402 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 NEK10Q6ZWH5 1172 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.43□□□□□ -1.7
RGPD1-202ENST00000409776 PLCZ1Q86YW0 608 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 PPHLN1Q8NEY8 458 aaKnown RBP4.43□□□□□ -1.7
RGPD1-202ENST00000409776 BCAS4Q8TDM0 211 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 ARHGAP45Q92619 1136 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 DHX38Q92620 1227 aaKnown RBP4.43□□□□□ -1.7
RGPD1-202ENST00000409776 CCDC127Q96BQ5 260 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 TBATAQ96M53 351 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 HAUS7Q99871 368 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 CAPS2Q9BXY5 557 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 LRRC27Q9C0I9 530 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 UBN1Q9NPG3 1134 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 MCM8Q9UJA3 840 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 RRP15Q9Y3B9 282 aaKnown RBP4.43□□□□□ -1.7
RGPD1-202ENST00000409776 DCAF1Q9Y4B6 1507 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 SCAPERQ9BY12 1400 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 RAD50Q92878 1312 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 A6NJR5 290 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 SPDYE16A6NNV3 312 aaPredicted RBP4.43□□□□□ -1.7
RGPD1-202ENST00000409776 HMBSP08397 361 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 XPAP23025 273 aaPredicted RBP4.43□□□□□ -1.7
RGPD1-202ENST00000409776 AKAP5P24588 427 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 GSDMDP57764 484 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 EPS8Q12929 822 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 PABPC4Q13310 644 aaKnown RBP eCLIP4.43□□□□□ -1.7
RGPD1-202ENST00000409776 SNAP47Q5SQN1 464 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 TMTC4Q5T4D3 741 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 C16orf62Q7Z3J2 963 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 CPXCR1Q8N123 301 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 COMMD1Q8N668 190 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 MINDY2Q8NBR6 621 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 STKLD1Q8NE28 680 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 PBXIP1Q96AQ6 731 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 KIFC1Q9BW19 673 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 SRCIN1Q9C0H9 1055 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 TMEM168Q9H0V1 697 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 NEUROD4Q9HD90 331 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 RGL1Q9NZL6 768 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 ANGPTL2Q9UKU9 493 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.43□□□□□ -1.7
RGPD1-202ENST00000409776 SERPINB3P29508 390 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 SERPINB4P48594 390 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 GNG11P61952 73 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 LGALS3BPQ08380 585 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 TAF5Q15542 800 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 CCNG2Q16589 344 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 CDO1Q16878 200 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 TMC6Q7Z403 805 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 DNAJB7Q7Z6W7 309 aaPredicted RBP4.43□□□□□ -1.7
RGPD1-202ENST00000409776 MYRIPQ8NFW9 859 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 CHMP7Q8WUX9 453 aaPredicted RBP4.43□□□□□ -1.7
RGPD1-202ENST00000409776 TBC1D14Q9P2M4 693 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 RCAN3Q9UKA8 241 aa4.43□□□□□ -1.7
RGPD1-202ENST00000409776 TBC1D4O60343 1298 aa4.42□□□□□ -1.7
RGPD1-202ENST00000409776 SNX2O60749 519 aa4.42□□□□□ -1.7
RGPD1-202ENST00000409776 CCDC22O60826 627 aa4.42□□□□□ -1.7
RGPD1-202ENST00000409776 PDHA2P29803 388 aa4.42□□□□□ -1.7
RGPD1-202ENST00000409776 CYTH1Q15438 398 aa4.42□□□□□ -1.7
RGPD1-202ENST00000409776 RABL6Q3YEC7 729 aaPredicted RBP4.42□□□□□ -1.7
RGPD1-202ENST00000409776 HERC4Q5GLZ8 1057 aaPredicted RBP4.42□□□□□ -1.7
RGPD1-202ENST00000409776 CCDC42Q96M95 316 aa4.42□□□□□ -1.7
RGPD1-202ENST00000409776 CREBZFQ9NS37 354 aa4.42□□□□□ -1.7
RGPD1-202ENST00000409776 MLXQ9UH92 298 aa4.42□□□□□ -1.7
RGPD1-202ENST00000409776 P4HBP07237 508 aaKnown RBP4.42□□□□□ -1.7
RGPD1-202ENST00000409776 P4HA1P13674 534 aa4.42□□□□□ -1.7
RGPD1-202ENST00000409776 TUFMP49411 452 aaKnown RBP4.42□□□□□ -1.7
RGPD1-202ENST00000409776 PMPCAQ10713 525 aa4.42□□□□□ -1.7
RGPD1-202ENST00000409776 MMRN1Q13201 1228 aa4.42□□□□□ -1.7
RGPD1-202ENST00000409776 DHX34Q14147 1143 aaKnown RBP4.42□□□□□ -1.7
RGPD1-202ENST00000409776 TCEAL5Q5H9L2 206 aa4.42□□□□□ -1.7
RGPD1-202ENST00000409776 LLGL2Q6P1M3 1020 aa4.42□□□□□ -1.7
RGPD1-202ENST00000409776 BLOC1S2Q6QNY1 142 aa4.42□□□□□ -1.7
RGPD1-202ENST00000409776 CCDC185Q8N715 623 aa4.42□□□□□ -1.7
RGPD1-202ENST00000409776 THRSPQ92748 146 aa4.42□□□□□ -1.7
RGPD1-202ENST00000409776 CITED2Q99967 270 aaPredicted RBP4.42□□□□□ -1.7
RGPD1-202ENST00000409776 STOML1Q9UBI4 398 aa4.42□□□□□ -1.7
RGPD1-202ENST00000409776 SEC63Q9UGP8 760 aaKnown RBP4.42□□□□□ -1.7
RGPD1-202ENST00000409776 ACAD8Q9UKU7 415 aa4.42□□□□□ -1.7
RGPD1-202ENST00000409776 AKAP2Q9Y2D5 859 aa4.42□□□□□ -1.7
RGPD1-202ENST00000409776 A8MV72 311 aaPredicted RBP4.42□□□□□ -1.7
RGPD1-202ENST00000409776 ZNF879B4DU55 563 aa4.42□□□□□ -1.7
RGPD1-202ENST00000409776 PPIP5K2O43314 1243 aa4.42□□□□□ -1.7
RGPD1-202ENST00000409776 MTTPP55157 894 aa4.42□□□□□ -1.7
RGPD1-202ENST00000409776 C3orf33Q6P1S2 294 aa4.42□□□□□ -1.7
RGPD1-202ENST00000409776 SYCE2Q6PIF2 218 aa4.42□□□□□ -1.7
RGPD1-202ENST00000409776 POTEAQ6S8J7 498 aa4.42□□□□□ -1.7
RGPD1-202ENST00000409776 SPATA6LQ8N4H0 392 aa4.42□□□□□ -1.7
RGPD1-202ENST00000409776 TMIEQ8NEW7 156 aa4.42□□□□□ -1.7
RGPD1-202ENST00000409776 KCTD4Q8WVF5 259 aa4.42□□□□□ -1.7
RGPD1-202ENST00000409776 HINFPQ9BQA5 517 aa4.42□□□□□ -1.7
RGPD1-202ENST00000409776 USP40Q9NVE5 1235 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms