RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 TMEM119Q4V9L6 283 aa13.96□□□□□ -0.17
CHMP3-204ENST00000409727 CATSPER3Q86XQ3 398 aa13.96□□□□□ -0.17
CHMP3-204ENST00000409727 GPRC5AQ8NFJ5 357 aa13.96□□□□□ -0.17
CHMP3-204ENST00000409727 LARP4BQ92615 738 aaKnown RBP13.96□□□□□ -0.17
CHMP3-204ENST00000409727 MMP19Q99542 508 aa13.96□□□□□ -0.17
CHMP3-204ENST00000409727 EIF2AK1Q9BQI3 630 aaKnown RBP13.96□□□□□ -0.17
CHMP3-204ENST00000409727 CUEDC2Q9H467 287 aa13.96□□□□□ -0.17
CHMP3-204ENST00000409727 KBTBD4Q9NVX7 518 aa13.96□□□□□ -0.17
CHMP3-204ENST00000409727 RGL1Q9NZL6 768 aa13.96□□□□□ -0.17
CHMP3-204ENST00000409727 SLC45A1Q9Y2W3 748 aa13.96□□□□□ -0.17
CHMP3-204ENST00000409727 E9PMD0 336 aa13.95□□□□□ -0.18
CHMP3-204ENST00000409727 ATP9AO75110 1047 aa13.95□□□□□ -0.18
CHMP3-204ENST00000409727 RPN1P04843 607 aaKnown RBP13.95□□□□□ -0.18
CHMP3-204ENST00000409727 BCRP11274 1271 aa13.95□□□□□ -0.18
CHMP3-204ENST00000409727 ITGB3BPQ13352 177 aaPredicted RBP13.95□□□□□ -0.18
CHMP3-204ENST00000409727 PPP2R5CQ13362 524 aa13.95□□□□□ -0.18
CHMP3-204ENST00000409727 MORC3Q14149 939 aa13.95□□□□□ -0.18
CHMP3-204ENST00000409727 CTTNQ14247 550 aaKnown RBP13.95□□□□□ -0.18
CHMP3-204ENST00000409727 KCTD2Q14681 263 aa13.95□□□□□ -0.18
CHMP3-204ENST00000409727 SV2BQ7L1I2 683 aa13.95□□□□□ -0.18
CHMP3-204ENST00000409727 NIPA1Q7RTP0 329 aa13.95□□□□□ -0.18
CHMP3-204ENST00000409727 SMYD4Q8IYR2 804 aaPredicted RBP13.95□□□□□ -0.18
CHMP3-204ENST00000409727 AOPEPQ8N6M6 819 aa13.95□□□□□ -0.18
CHMP3-204ENST00000409727 SMC1BQ8NDV3 1235 aa13.95□□□□□ -0.18
CHMP3-204ENST00000409727 SPATA20Q8TB22 786 aa13.95□□□□□ -0.18
CHMP3-204ENST00000409727 RAD54LQ92698 747 aa13.95□□□□□ -0.18
CHMP3-204ENST00000409727 NT5C3AQ9H0P0 336 aa13.95□□□□□ -0.18
CHMP3-204ENST00000409727 STK17AQ9UEE5 414 aa13.95□□□□□ -0.18
CHMP3-204ENST00000409727 LCTP09848 1927 aa13.95□□□□□ -0.18
CHMP3-204ENST00000409727 SOWAHBA6NEL2 793 aa13.95□□□□□ -0.18
CHMP3-204ENST00000409727 BECN2A8MW95 431 aa13.95□□□□□ -0.18
CHMP3-204ENST00000409727 SORBS3O60504 671 aa13.95□□□□□ -0.18
CHMP3-204ENST00000409727 SPATA31C1P0DKV0 1188 aa13.95□□□□□ -0.18
CHMP3-204ENST00000409727 ALDH5A1P51649 535 aaPredicted RBP13.95□□□□□ -0.18
CHMP3-204ENST00000409727 PAXIP1Q6ZW49 1069 aaPredicted RBP13.95□□□□□ -0.18
CHMP3-204ENST00000409727 DYMQ7RTS9 669 aa13.95□□□□□ -0.18
CHMP3-204ENST00000409727 TPH2Q8IWU9 490 aa13.95□□□□□ -0.18
CHMP3-204ENST00000409727 DNERQ8NFT8 737 aa13.95□□□□□ -0.18
CHMP3-204ENST00000409727 ANP32BQ92688 251 aaKnown RBP13.95□□□□□ -0.18
CHMP3-204ENST00000409727 GSDMAQ96QA5 445 aa13.95□□□□□ -0.18
CHMP3-204ENST00000409727 PARK7Q99497 189 aaKnown RBP13.95□□□□□ -0.18
CHMP3-204ENST00000409727 MAGEF1Q9HAY2 307 aa13.95□□□□□ -0.18
CHMP3-204ENST00000409727 SAMM50Q9Y512 469 aa13.95□□□□□ -0.18
CHMP3-204ENST00000409727 GOLGA6L19H0YKK7 550 aa13.94□□□□□ -0.18
CHMP3-204ENST00000409727 RGS20O76081 388 aa13.94□□□□□ -0.18
CHMP3-204ENST00000409727 CAVIN2O95810 425 aa13.94□□□□□ -0.18
CHMP3-204ENST00000409727 FCER1AP12319 257 aa13.94□□□□□ -0.18
CHMP3-204ENST00000409727 RPA1P27694 616 aa13.94□□□□□ -0.18
CHMP3-204ENST00000409727 COPB2P35606 906 aa13.94□□□□□ -0.18
CHMP3-204ENST00000409727 PSMC6P62333 389 aa13.94□□□□□ -0.18
CHMP3-204ENST00000409727 ASIC1P78348 528 aa13.94□□□□□ -0.18
CHMP3-204ENST00000409727 IQCB1Q15051 598 aa13.94□□□□□ -0.18
CHMP3-204ENST00000409727 XRRA1Q6P2D8 792 aa13.94□□□□□ -0.18
CHMP3-204ENST00000409727 NLRX1Q86UT6 975 aa13.94□□□□□ -0.18
CHMP3-204ENST00000409727 DHX40Q8IX18 779 aaKnown RBP13.94□□□□□ -0.18
CHMP3-204ENST00000409727 GTF3C2Q8WUA4 911 aaPredicted RBP13.94□□□□□ -0.18
CHMP3-204ENST00000409727 DYDC2Q96IM9 177 aa13.94□□□□□ -0.18
CHMP3-204ENST00000409727 RIT2Q99578 217 aa13.94□□□□□ -0.18
CHMP3-204ENST00000409727 MROH8Q9H579 483 aa13.94□□□□□ -0.18
CHMP3-204ENST00000409727 MYMKA6NI61 221 aa13.93□□□□□ -0.18
CHMP3-204ENST00000409727 IGF2BP3O00425 579 aaKnown RBP eCLIP13.93□□□□□ -0.18
CHMP3-204ENST00000409727 DHX15O43143 795 aaKnown RBP13.93□□□□□ -0.18
CHMP3-204ENST00000409727 CCNA1P78396 465 aa13.93□□□□□ -0.18
CHMP3-204ENST00000409727 AMPD3Q01432 767 aa13.93□□□□□ -0.18
CHMP3-204ENST00000409727 STXBP2Q15833 593 aa13.93□□□□□ -0.18
CHMP3-204ENST00000409727 HYIQ5T013 277 aa13.93□□□□□ -0.18
CHMP3-204ENST00000409727 SEPT14Q6ZU15 432 aa13.93□□□□□ -0.18
CHMP3-204ENST00000409727 EEPD1Q7L9B9 569 aa13.93□□□□□ -0.18
CHMP3-204ENST00000409727 MIER3Q7Z3K6 550 aa13.93□□□□□ -0.18
CHMP3-204ENST00000409727 TRIML1Q8N9V2 468 aa13.93□□□□□ -0.18
CHMP3-204ENST00000409727 BANK1Q8NDB2 785 aa13.93□□□□□ -0.18
CHMP3-204ENST00000409727 TRIM9Q9C026 710 aa13.93□□□□□ -0.18
CHMP3-204ENST00000409727 ADD3Q9UEY8 706 aaKnown RBP13.93□□□□□ -0.18
CHMP3-204ENST00000409727 TLL2Q9Y6L7 1015 aa13.93□□□□□ -0.18
CHMP3-204ENST00000409727 MANSC4A6NHS7 340 aaPredicted RBP13.93□□□□□ -0.18
CHMP3-204ENST00000409727 PLA2G4BP0C869 781 aa13.93□□□□□ -0.18
CHMP3-204ENST00000409727 GCLCP48506 637 aaPredicted RBP13.93□□□□□ -0.18
CHMP3-204ENST00000409727 SP4Q02446 784 aa13.93□□□□□ -0.18
CHMP3-204ENST00000409727 PDE4DQ08499 809 aa13.93□□□□□ -0.18
CHMP3-204ENST00000409727 SEMA3FQ13275 785 aa13.93□□□□□ -0.18
CHMP3-204ENST00000409727 UVSSAQ2YD98 709 aa13.93□□□□□ -0.18
CHMP3-204ENST00000409727 KMT5BQ4FZB7 885 aa13.93□□□□□ -0.18
CHMP3-204ENST00000409727 KLHL10Q6JEL2 608 aa13.93□□□□□ -0.18
CHMP3-204ENST00000409727 FAM133AQ8N9E0 248 aa13.93□□□□□ -0.18
CHMP3-204ENST00000409727 GPRASP2Q96D09 838 aa13.93□□□□□ -0.18
CHMP3-204ENST00000409727 INPP4AQ96PE3 977 aaPredicted RBP13.93□□□□□ -0.18
CHMP3-204ENST00000409727 IWS1Q96ST2 819 aa13.93□□□□□ -0.18
CHMP3-204ENST00000409727 MAF1Q9H063 256 aa13.93□□□□□ -0.18
CHMP3-204ENST00000409727 TCEAL9Q9UHQ7 104 aa13.93□□□□□ -0.18
CHMP3-204ENST00000409727 CPA4Q9UI42 421 aa13.93□□□□□ -0.18
CHMP3-204ENST00000409727 SLITRK3O94933 977 aa13.92□□□□□ -0.18
CHMP3-204ENST00000409727 SLC10A3P09131 477 aa13.92□□□□□ -0.18
CHMP3-204ENST00000409727 RAD51AP2Q09MP3 1159 aa13.92□□□□□ -0.18
CHMP3-204ENST00000409727 GNPTABQ3T906 1256 aa13.92□□□□□ -0.18
CHMP3-204ENST00000409727 TRMT1LQ7Z2T5 733 aaKnown RBP13.92□□□□□ -0.18
CHMP3-204ENST00000409727 PIGOQ8TEQ8 1089 aa13.92□□□□□ -0.18
CHMP3-204ENST00000409727 DDX12PQ92771 950 aa13.92□□□□□ -0.18
CHMP3-204ENST00000409727 HSD17B14Q9BPX1 270 aa13.92□□□□□ -0.18
CHMP3-204ENST00000409727 C7orf25Q9BPX7 421 aa13.92□□□□□ -0.18
CHMP3-204ENST00000409727 POLR3CQ9BUI4 534 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms