RNA–Protein interactions for RNA: ENST00000409454.5

HMGN2P46-204, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 46, human

TSL 2 BASIC

Gene HMGN2P46, Length 1,923 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN2P46-204	ENST00000409454	HNRNPH3	P31942	346 aa	Known RBP	7.61	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	ZNF76	P36508	570 aa		7.61	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	VAV2	P52735	878 aa		7.61	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	KLRC3	Q07444	240 aa		7.61	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	COASY	Q13057	564 aa		7.61	□□□□□ -1.19
HMGN2P46-204	ENST00000409454		Q4G0T1	1027 aa		7.61	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	MIIP	Q5JXC2	388 aa		7.61	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	SYDE2	Q5VT97	1194 aa		7.61	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	CLEC10A	Q8IUN9	316 aa		7.61	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	HAS1	Q92839	578 aa		7.61	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	SECISBP2L	Q93073	1101 aa	Known RBP	7.61	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	CHP1	Q99653	195 aa		7.61	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	MXD3	Q9BW11	206 aa		7.61	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	IRX2	Q9BZI1	471 aa	Predicted RBP	7.61	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	SEMA6B	Q9H3T3	888 aa		7.61	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	MMRN2	Q9H8L6	949 aa		7.61	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	GOPC	Q9HD26	462 aa		7.61	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	FAM53C	Q9NYF3	392 aa		7.61	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	KIAA1024	Q9UPX6	916 aa		7.61	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	ATRNL1	Q5VV63	1379 aa		7.61	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	GLTPD2	A6NH11	291 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	USP17L15	C9J2P7	530 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	USP17L13	C9JLJ4	530 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	USP17L11	C9JVI0	530 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	USP17L18	D6R9N7	530 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	USP17L22	D6RA61	530 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	USP17L17	D6RBQ6	530 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	USP17L19	D6RCP7	530 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	USP17L20	D6RJB6	530 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	TRAF5	O00463	557 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	CETN3	O15182	167 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	AKR1B10	O60218	316 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	ZRANB2	O95218	330 aa	Known RBP eCLIP	7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	ZSCAN20	P17040	1043 aa	Predicted RBP	7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	ARHGAP25	P42331	645 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	STAT2	P52630	851 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	ARHGAP4	P98171	946 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	EHHADH	Q08426	723 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	USP17L24	Q0WX57	530 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	EDRF1	Q3B7T1	1238 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	HERC4	Q5GLZ8	1057 aa	Predicted RBP	7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	CC2D1A	Q6P1N0	951 aa	Predicted RBP	7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	WDR59	Q6PJI9	974 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	USP17L6P	Q6QN14	398 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	ZNF771	Q7L3S4	317 aa	Predicted RBP	7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	GPBP1	Q86WP2	473 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	OGFOD1	Q8N543	542 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	LRRN4CL	Q8ND94	238 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	CAGE1	Q8TC20	777 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	LRRC15	Q8TF66	581 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	MBOAT7	Q96N66	472 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	CSRNP1	Q96S65	589 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	PARD6B	Q9BYG5	372 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	IFIH1	Q9BYX4	1025 aa	Known RBP	7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	AGPAT5	Q9NUQ2	364 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	FAM198A	Q9UFP1	575 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	PUF60	Q9UHX1	559 aa	Known RBP	7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	ANKRD31	Q8N7Z5	1873 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	DDTL	A6NHG4	134 aa	Predicted RBP	7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	CALU	O43852	315 aa	Predicted RBP	7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	PPP1R12B	O60237	982 aa	Predicted RBP	7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	TBCA	O75347	108 aa	Known RBP	7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	RPA1	P27694	616 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	SREBF1	P36956	1147 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	CTCF	P49711	727 aa	Predicted RBP	7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	SLC9C1	Q4G0N8	1177 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	PRR16	Q569H4	304 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	DPY19L2	Q6NUT2	758 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	HDX	Q7Z353	690 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	MSANTD4	Q8NCY6	345 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	SYN2	Q92777	582 aa	Predicted RBP	7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	DNAJC18	Q9H819	358 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	CREBZF	Q9NS37	354 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	FAM207A	Q9NSI2	230 aa	Predicted RBP	7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	EMILIN3	Q9NT22	766 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	ZNF446	Q9NWS9	450 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	CEP72	Q9P209	647 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	TSKS	Q9UJT2	592 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	JRKL	Q9Y4A0	524 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	FHOD1	Q9Y613	1164 aa		7.6	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	BAZ2B	Q9UIF8	2168 aa	Known RBP	7.59	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	GREB1L	Q9C091	1923 aa	Predicted RBP	7.59	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	SSU72P8	A0A1W2PR75	194 aa		7.59	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	RNF225	M0QZC1	329 aa	Predicted RBP	7.59	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	PIK3CD	O00329	1044 aa		7.59	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	PPIP5K2	O43314	1243 aa		7.59	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	NDUFB10	O96000	172 aa		7.59	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	LMNB1	P20700	586 aa		7.59	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	RPL13	P26373	211 aa	Known RBP	7.59	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	KIF11	P52732	1056 aa		7.59	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	CACNB3	P54284	484 aa		7.59	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	MARS	P56192	900 aa	Known RBP	7.59	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	USH1G	Q495M9	461 aa		7.59	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	PAPD7	Q5XG87	772 aa	Known RBP	7.59	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	NCAPH2	Q6IBW4	605 aa		7.59	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	BTNL9	Q6UXG8	535 aa		7.59	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	LRRC55	Q6ZSA7	311 aa		7.59	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	STXBP4	Q6ZWJ1	553 aa		7.59	□□□□□ -1.19
HMGN2P46-204	ENST00000409454	TRAPPC11	Q7Z392	1133 aa		7.59	□□□□□ -1.19

Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms