RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 STX18Q9P2W9 335 aaKnown RBP13.08□□□□□ -0.32
SHANK2-203ENST00000409161 GINS2Q9Y248 185 aa13.08□□□□□ -0.32
SHANK2-203ENST00000409161 ESRRBO95718 433 aa13.08□□□□□ -0.32
SHANK2-203ENST00000409161 POLGP54098 1239 aaPredicted RBP13.08□□□□□ -0.32
SHANK2-203ENST00000409161 ARMCX5Q6P1M9 558 aa13.08□□□□□ -0.32
SHANK2-203ENST00000409161 OTUB1Q96FW1 271 aaPredicted RBP13.08□□□□□ -0.32
SHANK2-203ENST00000409161 TEKT3Q9BXF9 490 aa13.08□□□□□ -0.32
SHANK2-203ENST00000409161 PITPNM3Q9BZ71 974 aa13.08□□□□□ -0.32
SHANK2-203ENST00000409161 WARS2Q9UGM6 360 aaKnown RBP13.08□□□□□ -0.32
SHANK2-203ENST00000409161 UFL1O94874 794 aa13.08□□□□□ -0.32
SHANK2-203ENST00000409161 PLS3P13797 630 aa13.08□□□□□ -0.32
SHANK2-203ENST00000409161 XPAP23025 273 aaPredicted RBP13.08□□□□□ -0.32
SHANK2-203ENST00000409161 PLTPP55058 493 aa13.08□□□□□ -0.32
SHANK2-203ENST00000409161 DCLK2Q8N568 766 aa13.08□□□□□ -0.32
SHANK2-203ENST00000409161 NAF1Q96HR8 494 aaKnown RBP13.08□□□□□ -0.32
SHANK2-203ENST00000409161 SEC24BO95487 1268 aa13.08□□□□□ -0.32
SHANK2-203ENST00000409161 MMEP08473 750 aa13.08□□□□□ -0.32
SHANK2-203ENST00000409161 GCFC2P16383 781 aaKnown RBP13.08□□□□□ -0.32
SHANK2-203ENST00000409161 CARMIL3Q8ND23 1372 aa13.08□□□□□ -0.32
SHANK2-203ENST00000409161 DLATP10515 647 aaKnown RBP13.08□□□□□ -0.32
SHANK2-203ENST00000409161 SMARCA1P28370 1054 aa13.08□□□□□ -0.32
SHANK2-203ENST00000409161 ZNF532Q9HCE3 1301 aa13.08□□□□□ -0.32
SHANK2-203ENST00000409161 PEG3Q9GZU2 1588 aa13.08□□□□□ -0.32
SHANK2-203ENST00000409161 KRT38O76015 456 aa13.08□□□□□ -0.32
SHANK2-203ENST00000409161 CASP14P31944 242 aa13.08□□□□□ -0.32
SHANK2-203ENST00000409161 FAM26FQ5R3K3 315 aa13.08□□□□□ -0.32
SHANK2-203ENST00000409161 CAPN12Q6ZSI9 719 aa13.08□□□□□ -0.32
SHANK2-203ENST00000409161 KIRREL3Q8IZU9 778 aa13.08□□□□□ -0.32
SHANK2-203ENST00000409161 FBXO18Q8NFZ0 1043 aa13.08□□□□□ -0.32
SHANK2-203ENST00000409161 TMEM206Q9H813 350 aa13.08□□□□□ -0.32
SHANK2-203ENST00000409161 ATP6V0A4Q9HBG4 840 aa13.08□□□□□ -0.32
SHANK2-203ENST00000409161 AS3MTQ9HBK9 375 aa13.08□□□□□ -0.32
SHANK2-203ENST00000409161 BAZ2BQ9UIF8 2168 aaKnown RBP13.08□□□□□ -0.32
SHANK2-203ENST00000409161 DEAF1O75398 565 aaPredicted RBP13.07□□□□□ -0.32
SHANK2-203ENST00000409161 CFBP00751 764 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 NDUFA8P51970 172 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 RHOT2Q8IXI1 618 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 PYROXD1Q8WU10 500 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 ZNF653Q96CK0 615 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 GRAMD1AQ96CP6 724 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 PGBD1Q96JS3 809 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 FAM227BQ96M60 508 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 MPP6Q9NZW5 540 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 E2F6O75461 281 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 ARL13BQ3SXY8 428 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 LZICQ8WZA0 190 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 LAMC1P11047 1609 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 SLFN14P0C7P3 912 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 SRGAP2CP0DJJ0 459 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 PPARAQ07869 468 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 TEX9Q8N6V9 391 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 KIF9Q9HAQ2 790 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 BATF3Q9NR55 127 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 MESDQ14696 234 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 SURF1Q15526 300 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 CPSF3Q9UKF6 684 aaKnown RBP13.07□□□□□ -0.32
SHANK2-203ENST00000409161 CLEC11AQ9Y240 323 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 KPNA7A9QM74 516 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 CPA1P15085 419 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 TFAP4Q01664 338 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 THAP9Q9H5L6 903 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 GOLGA8MH3BSY2 632 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 TECP42680 631 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 LRRC63Q05C16 580 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 IDI1Q13907 227 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 TRIM67Q6ZTA4 783 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 PATL1Q86TB9 770 aaKnown RBP13.07□□□□□ -0.32
SHANK2-203ENST00000409161 SPDYE1Q8NFV5 336 aaPredicted RBP13.07□□□□□ -0.32
SHANK2-203ENST00000409161 SYMPKQ92797 1274 aaKnown RBP13.07□□□□□ -0.32
SHANK2-203ENST00000409161 DACH2Q96NX9 599 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 ZSWIM6Q9HCJ5 1215 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 KCNJ14Q9UNX9 436 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 ANKRD12Q6UB98 2062 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 SPDYE2BA6NHP3 402 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 POLR2MP0CAP2 368 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 SPDYE6P0CI01 402 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 NR2F2P24468 414 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 MRPS15P82914 257 aaKnown RBP13.07□□□□□ -0.32
SHANK2-203ENST00000409161 AP1B1Q10567 949 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 KIF19Q2TAC6 998 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 C4orf50Q6ZRC1 276 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 HNRNPCP07910 306 aaKnown RBP eCLIP13.07□□□□□ -0.32
SHANK2-203ENST00000409161 SERPINB4P48594 390 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 C1orf146Q5VVC0 180 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 KLC2Q9H0B6 622 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 ZFP69BQ9UJL9 534 aa13.07□□□□□ -0.32
SHANK2-203ENST00000409161 ZNF658Q5TYW1 1059 aaPredicted RBP13.06□□□□□ -0.32
SHANK2-203ENST00000409161 CAPRIN2Q6IMN6 1127 aaKnown RBP13.06□□□□□ -0.32
SHANK2-203ENST00000409161 SEPT3Q9UH03 358 aa13.06□□□□□ -0.32
SHANK2-203ENST00000409161 CA4P22748 312 aa13.06□□□□□ -0.32
SHANK2-203ENST00000409161 ADAT2Q7Z6V5 191 aaKnown RBP13.06□□□□□ -0.32
SHANK2-203ENST00000409161 LARP4BQ92615 738 aaKnown RBP13.06□□□□□ -0.32
SHANK2-203ENST00000409161 COG4Q9H9E3 785 aa13.06□□□□□ -0.32
SHANK2-203ENST00000409161 PNMA6AP0CW24 399 aaPredicted RBP13.06□□□□□ -0.32
SHANK2-203ENST00000409161 MYO1EQ12965 1108 aa13.06□□□□□ -0.32
SHANK2-203ENST00000409161 SEMA3EO15041 775 aa13.06□□□□□ -0.32
SHANK2-203ENST00000409161 CYP4F22Q6NT55 531 aa13.06□□□□□ -0.32
SHANK2-203ENST00000409161 DNAJC24Q6P3W2 148 aa13.06□□□□□ -0.32
SHANK2-203ENST00000409161 KIAA2013Q8IYS2 634 aa13.06□□□□□ -0.32
SHANK2-203ENST00000409161 PLEKHA4Q9H4M7 779 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms