RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 ZMAT2Q96NC0 199 aaKnown RBP19.13■□□□□ 0.65
SMPD4-202ENST00000409031 ZBTB21Q9ULJ3 1066 aa19.13■□□□□ 0.65
SMPD4-202ENST00000409031 TRIM49BA6NDI0 452 aa19.13■□□□□ 0.65
SMPD4-202ENST00000409031 IL2RBP14784 551 aa19.13■□□□□ 0.65
SMPD4-202ENST00000409031 ATF7P17544 494 aaPredicted RBP19.13■□□□□ 0.65
SMPD4-202ENST00000409031 PLCG1P19174 1290 aa19.13■□□□□ 0.65
SMPD4-202ENST00000409031 SEC24CP53992 1094 aa19.13■□□□□ 0.65
SMPD4-202ENST00000409031 LRRC41Q15345 812 aa19.13■□□□□ 0.65
SMPD4-202ENST00000409031 AGBL2Q5U5Z8 902 aa19.13■□□□□ 0.65
SMPD4-202ENST00000409031 ZIM3Q96PE6 472 aa19.13■□□□□ 0.65
SMPD4-202ENST00000409031 SETDB2Q96T68 719 aa19.13■□□□□ 0.65
SMPD4-202ENST00000409031 TRIM55Q9BYV6 548 aa19.13■□□□□ 0.65
SMPD4-202ENST00000409031 DDX47Q9H0S4 455 aaKnown RBP19.13■□□□□ 0.65
SMPD4-202ENST00000409031 ARL2BPQ9Y2Y0 163 aa19.13■□□□□ 0.65
SMPD4-202ENST00000409031 FAM47EQ6ZV65 393 aa19.12■□□□□ 0.65
SMPD4-202ENST00000409031 FAM187AA6NFU0 413 aa19.12■□□□□ 0.65
SMPD4-202ENST00000409031 ZRANB2O95218 330 aaKnown RBP eCLIP19.12■□□□□ 0.65
SMPD4-202ENST00000409031 FMR1Q06787 632 aaKnown RBP eCLIP19.12■□□□□ 0.65
SMPD4-202ENST00000409031 CASC4Q6P4E1 433 aa19.12■□□□□ 0.65
SMPD4-202ENST00000409031 ZNF185O15231 689 aa19.12■□□□□ 0.65
SMPD4-202ENST00000409031 APLFQ8IW19 511 aaPredicted RBP19.12■□□□□ 0.65
SMPD4-202ENST00000409031 RHOT2Q8IXI1 618 aa19.12■□□□□ 0.65
SMPD4-202ENST00000409031 SLFN12Q8IYM2 578 aa19.12■□□□□ 0.65
SMPD4-202ENST00000409031 CCT8L1PA6NM43 557 aa19.12■□□□□ 0.65
SMPD4-202ENST00000409031 NYXQ9GZU5 481 aa19.12■□□□□ 0.65
SMPD4-202ENST00000409031 INTUQ9ULD6 942 aa19.12■□□□□ 0.65
SMPD4-202ENST00000409031 SYNGAP1Q96PV0 1343 aa19.11■□□□□ 0.65
SMPD4-202ENST00000409031 CDHR2Q9BYE9 1310 aa19.11■□□□□ 0.65
SMPD4-202ENST00000409031 FAM170AA1A519 330 aa19.11■□□□□ 0.65
SMPD4-202ENST00000409031 SPECC1L-ADORA2AF8WAN1 911 aa19.11■□□□□ 0.65
SMPD4-202ENST00000409031 CDR2Q01850 454 aa19.11■□□□□ 0.65
SMPD4-202ENST00000409031 GJA10Q969M2 543 aa19.11■□□□□ 0.65
SMPD4-202ENST00000409031 DYDC2Q96IM9 177 aa19.11■□□□□ 0.65
SMPD4-202ENST00000409031 NOD2Q9HC29 1040 aa19.11■□□□□ 0.65
SMPD4-202ENST00000409031 MT-ND3P03897 115 aa19.11■□□□□ 0.65
SMPD4-202ENST00000409031 GEN1Q17RS7 908 aa19.11■□□□□ 0.65
SMPD4-202ENST00000409031 DPH6Q7L8W6 267 aa19.11■□□□□ 0.65
SMPD4-202ENST00000409031 PUS3Q9BZE2 481 aaKnown RBP19.11■□□□□ 0.65
SMPD4-202ENST00000409031 ZFP69BQ9UJL9 534 aa19.11■□□□□ 0.65
SMPD4-202ENST00000409031 PDE8BO95263 885 aa19.11■□□□□ 0.65
SMPD4-202ENST00000409031 PCCAP05165 728 aaPredicted RBP19.11■□□□□ 0.65
SMPD4-202ENST00000409031 BRAFP15056 766 aa19.11■□□□□ 0.65
SMPD4-202ENST00000409031 GFPT1Q06210 699 aaPredicted RBP19.11■□□□□ 0.65
SMPD4-202ENST00000409031 KDM7AQ6ZMT4 941 aa19.11■□□□□ 0.65
SMPD4-202ENST00000409031 MB21D2Q8IYB1 491 aaPredicted RBP19.11■□□□□ 0.65
SMPD4-202ENST00000409031 XPO6Q96QU8 1125 aaKnown RBP19.11■□□□□ 0.65
SMPD4-202ENST00000409031 MOV10L1Q9BXT6 1211 aaKnown RBP19.11■□□□□ 0.65
SMPD4-202ENST00000409031 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.11■□□□□ 0.65
SMPD4-202ENST00000409031 PLEKHG2Q9H7P9 1386 aa19.11■□□□□ 0.65
SMPD4-202ENST00000409031 LRRIQ3A6PVS8 624 aaPredicted RBP19.11■□□□□ 0.65
SMPD4-202ENST00000409031 GFPT2O94808 682 aa19.11■□□□□ 0.65
SMPD4-202ENST00000409031 ZWINTO95229 277 aa19.11■□□□□ 0.65
SMPD4-202ENST00000409031 MYCNP04198 464 aaPredicted RBP19.11■□□□□ 0.65
SMPD4-202ENST00000409031 EXOSC10Q01780 885 aaKnown RBP19.11■□□□□ 0.65
SMPD4-202ENST00000409031 FAM178BQ8IXR5 827 aa19.11■□□□□ 0.65
SMPD4-202ENST00000409031 PPM1KQ8N3J5 372 aa19.11■□□□□ 0.65
SMPD4-202ENST00000409031 CEP70Q8NHQ1 597 aa19.11■□□□□ 0.65
SMPD4-202ENST00000409031 USP40Q9NVE5 1235 aa19.11■□□□□ 0.65
SMPD4-202ENST00000409031 CEBPAP49715 358 aaPredicted RBP19.1■□□□□ 0.65
SMPD4-202ENST00000409031 CTSWP56202 376 aa19.1■□□□□ 0.65
SMPD4-202ENST00000409031 GRAMD1BQ3KR37 738 aa19.1■□□□□ 0.65
SMPD4-202ENST00000409031 NSMCE1Q8WV22 266 aa19.1■□□□□ 0.65
SMPD4-202ENST00000409031 DRC3Q9H069 523 aa19.1■□□□□ 0.65
SMPD4-202ENST00000409031 RAB21Q9UL25 225 aa19.1■□□□□ 0.65
SMPD4-202ENST00000409031 KIF28PB7ZC32 967 aa19.1■□□□□ 0.65
SMPD4-202ENST00000409031 PHEXP78562 749 aa19.1■□□□□ 0.65
SMPD4-202ENST00000409031 SNX1Q13596 522 aa19.1■□□□□ 0.65
SMPD4-202ENST00000409031 TRPM8Q7Z2W7 1104 aa19.1■□□□□ 0.65
SMPD4-202ENST00000409031 RNPC3Q96LT9 517 aaKnown RBP19.1■□□□□ 0.65
SMPD4-202ENST00000409031 VCPKMTQ9H867 229 aa19.1■□□□□ 0.65
SMPD4-202ENST00000409031 EPS15L1Q9UBC2 864 aa19.1■□□□□ 0.65
SMPD4-202ENST00000409031 TBX22Q9Y458 520 aa19.1■□□□□ 0.65
SMPD4-202ENST00000409031 HMGB2P26583 209 aaKnown RBP19.1■□□□□ 0.65
SMPD4-202ENST00000409031 PSMC2P35998 433 aaKnown RBP19.1■□□□□ 0.65
SMPD4-202ENST00000409031 PPP4R3CPQ6ZMV5 832 aa19.1■□□□□ 0.65
SMPD4-202ENST00000409031 PROM2Q8N271 834 aa19.1■□□□□ 0.65
SMPD4-202ENST00000409031 TGS1Q96RS0 853 aaKnown RBP19.1■□□□□ 0.65
SMPD4-202ENST00000409031 DDX25Q9UHL0 483 aaKnown RBP19.1■□□□□ 0.65
SMPD4-202ENST00000409031 AGTP01019 485 aa19.09■□□□□ 0.65
SMPD4-202ENST00000409031 USPL1Q5W0Q7 1092 aa19.09■□□□□ 0.65
SMPD4-202ENST00000409031 STAG2Q8N3U4 1231 aa19.09■□□□□ 0.65
SMPD4-202ENST00000409031 MYCBPAPQ8TBZ2 947 aa19.09■□□□□ 0.65
SMPD4-202ENST00000409031 RASGRP4Q8TDF6 673 aa19.09■□□□□ 0.65
SMPD4-202ENST00000409031 PHF20L1A8MW92 1017 aa19.09■□□□□ 0.65
SMPD4-202ENST00000409031 RASA4BC9J798 803 aa19.09■□□□□ 0.65
SMPD4-202ENST00000409031 RASA4O43374 803 aa19.09■□□□□ 0.65
SMPD4-202ENST00000409031 PHKA1P46020 1223 aa19.09■□□□□ 0.65
SMPD4-202ENST00000409031 SPATA21Q7Z572 469 aa19.09■□□□□ 0.65
SMPD4-202ENST00000409031 ZNF653Q96CK0 615 aa19.09■□□□□ 0.65
SMPD4-202ENST00000409031 CYTH2Q99418 400 aa19.09■□□□□ 0.65
SMPD4-202ENST00000409031 IFT122Q9HBG6 1241 aa19.09■□□□□ 0.65
SMPD4-202ENST00000409031 JAG2Q9Y219 1238 aa19.09■□□□□ 0.65
SMPD4-202ENST00000409031 USP15Q9Y4E8 981 aaPredicted RBP19.09■□□□□ 0.65
SMPD4-202ENST00000409031 EIF4E1BA6NMX2 242 aaKnown RBP19.09■□□□□ 0.65
SMPD4-202ENST00000409031 HNRNPCL1O60812 293 aaKnown RBP19.09■□□□□ 0.65
SMPD4-202ENST00000409031 TRPA1O75762 1119 aa19.09■□□□□ 0.65
SMPD4-202ENST00000409031 KIAA1024Q9UPX6 916 aa19.09■□□□□ 0.65
SMPD4-202ENST00000409031 SSX2IPQ9Y2D8 614 aa19.09■□□□□ 0.65
SMPD4-202ENST00000409031 HAUS5O94927 633 aa19.09■□□□□ 0.65
SMPD4-202ENST00000409031 RCAN1P53805 252 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms