RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-205ENST00000405675 COL20A1Q9P218 1284 aa32.3■■■□□ 2.76
CSNK1E-205ENST00000405675 PAPPA2Q9BXP8 1791 aa32.3■■■□□ 2.76
CSNK1E-205ENST00000405675 NPHP3-ACAD11A0A0J9YXS1 232 aa32.3■■■□□ 2.76
CSNK1E-205ENST00000405675 EML1O00423 815 aa32.3■■■□□ 2.76
CSNK1E-205ENST00000405675 NRDCO43847 1150 aa32.3■■■□□ 2.76
CSNK1E-205ENST00000405675 KCNJ6P48051 423 aa32.3■■■□□ 2.76
CSNK1E-205ENST00000405675 TERF1P54274 439 aa32.3■■■□□ 2.76
CSNK1E-205ENST00000405675 PSMC6P62333 389 aa32.3■■■□□ 2.76
CSNK1E-205ENST00000405675 ERMNQ8TAM6 284 aa32.3■■■□□ 2.76
CSNK1E-205ENST00000405675 CLMNQ96JQ2 1002 aa32.3■■■□□ 2.76
CSNK1E-205ENST00000405675 PPP1R9AQ9ULJ8 1098 aa32.3■■■□□ 2.76
CSNK1E-205ENST00000405675 BICDL2A1A5D9 508 aa32.29■■■□□ 2.76
CSNK1E-205ENST00000405675 MEIS1O00470 390 aa32.29■■■□□ 2.76
CSNK1E-205ENST00000405675 PPP1R2P41236 205 aa32.29■■■□□ 2.76
CSNK1E-205ENST00000405675 RBL2Q08999 1139 aa32.29■■■□□ 2.76
CSNK1E-205ENST00000405675 COASYQ13057 564 aa32.29■■■□□ 2.76
CSNK1E-205ENST00000405675 MAP1SQ66K74 1059 aaPredicted RBP32.29■■■□□ 2.76
CSNK1E-205ENST00000405675 GPBP1Q86WP2 473 aa32.29■■■□□ 2.76
CSNK1E-205ENST00000405675 ELP3Q9H9T3 547 aa32.29■■■□□ 2.76
CSNK1E-205ENST00000405675 OTOFQ9HC10 1997 aa32.29■■■□□ 2.76
CSNK1E-205ENST00000405675 RPA1P27694 616 aa32.29■■■□□ 2.76
CSNK1E-205ENST00000405675 RRAGCQ9HB90 399 aa32.29■■■□□ 2.76
CSNK1E-205ENST00000405675 TNNT1P13805 278 aa32.28■■■□□ 2.76
CSNK1E-205ENST00000405675 SLC12A3P55017 1021 aa32.28■■■□□ 2.76
CSNK1E-205ENST00000405675 CENPPQ6IPU0 288 aa32.28■■■□□ 2.76
CSNK1E-205ENST00000405675 NOC3LQ8WTT2 800 aaKnown RBP32.28■■■□□ 2.76
CSNK1E-205ENST00000405675 EHMT1Q9H9B1 1298 aa32.28■■■□□ 2.76
CSNK1E-205ENST00000405675 ALAS1P13196 640 aa32.27■■■□□ 2.76
CSNK1E-205ENST00000405675 CYP11B2P19099 503 aa32.27■■■□□ 2.76
CSNK1E-205ENST00000405675 EEF1GP26641 437 aaKnown RBP32.27■■■□□ 2.76
CSNK1E-205ENST00000405675 LRRC41Q15345 812 aa32.27■■■□□ 2.76
CSNK1E-205ENST00000405675 NYAP1Q6ZVC0 841 aa32.27■■■□□ 2.76
CSNK1E-205ENST00000405675 SLC5A5Q92911 643 aa32.27■■■□□ 2.76
CSNK1E-205ENST00000405675 PANK4Q9NVE7 773 aa32.27■■■□□ 2.76
CSNK1E-205ENST00000405675 TMOD4Q9NZQ9 345 aa32.27■■■□□ 2.76
CSNK1E-205ENST00000405675 CACNB1Q02641 598 aaPredicted RBP32.27■■■□□ 2.76
CSNK1E-205ENST00000405675 CEP55Q53EZ4 464 aa32.27■■■□□ 2.76
CSNK1E-205ENST00000405675 ARSHQ5FYA8 562 aa32.27■■■□□ 2.76
CSNK1E-205ENST00000405675 ANKRD13AQ8IZ07 590 aa32.27■■■□□ 2.76
CSNK1E-205ENST00000405675 ITIH6Q6UXX5 1313 aa32.26■■■□□ 2.76
CSNK1E-205ENST00000405675 CYP4A11Q02928 519 aa32.26■■■□□ 2.76
CSNK1E-205ENST00000405675 MUM1L1Q5H9M0 696 aa32.26■■■□□ 2.76
CSNK1E-205ENST00000405675 CPLX3Q8WVH0 158 aa32.26■■■□□ 2.76
CSNK1E-205ENST00000405675 BAG1Q99933 345 aaPredicted RBP32.26■■■□□ 2.76
CSNK1E-205ENST00000405675 AKR1B15C9JRZ8 316 aaPredicted RBP32.26■■■□□ 2.75
CSNK1E-205ENST00000405675 TRAF5O00463 557 aa32.26■■■□□ 2.75
CSNK1E-205ENST00000405675 PSMD10O75832 226 aa32.26■■■□□ 2.75
CSNK1E-205ENST00000405675 PSMD2Q13200 908 aa32.26■■■□□ 2.75
CSNK1E-205ENST00000405675 OTOP1Q7RTM1 612 aa32.26■■■□□ 2.75
CSNK1E-205ENST00000405675 GUF1Q8N442 669 aaKnown RBP32.26■■■□□ 2.75
CSNK1E-205ENST00000405675 PPP1R13BQ96KQ4 1090 aa32.26■■■□□ 2.75
CSNK1E-205ENST00000405675 EIF2AK1Q9BQI3 630 aaKnown RBP32.26■■■□□ 2.75
CSNK1E-205ENST00000405675 HOMER2Q9NSB8 354 aa32.26■■■□□ 2.75
CSNK1E-205ENST00000405675 BMP2KQ9NSY1 1161 aaPredicted RBP32.26■■■□□ 2.75
CSNK1E-205ENST00000405675 ARP10275 920 aa32.25■■■□□ 2.75
CSNK1E-205ENST00000405675 RAD51AP2Q09MP3 1159 aa32.25■■■□□ 2.75
CSNK1E-205ENST00000405675 PPFIBP1Q86W92 1011 aa32.25■■■□□ 2.75
CSNK1E-205ENST00000405675 WNK4Q96J92 1243 aa32.25■■■□□ 2.75
CSNK1E-205ENST00000405675 FGFBP2Q9BYJ0 223 aa32.25■■■□□ 2.75
CSNK1E-205ENST00000405675 RGL1Q9NZL6 768 aa32.25■■■□□ 2.75
CSNK1E-205ENST00000405675 SH3D19Q5HYK7 790 aa32.24■■■□□ 2.75
CSNK1E-205ENST00000405675 LRCH2Q5VUJ6 765 aa32.24■■■□□ 2.75
CSNK1E-205ENST00000405675 RBM46Q8TBY0 533 aaKnown RBP32.24■■■□□ 2.75
CSNK1E-205ENST00000405675 ATG4CQ96DT6 458 aa32.24■■■□□ 2.75
CSNK1E-205ENST00000405675 MAGEC2Q9UBF1 373 aaPredicted RBP32.24■■■□□ 2.75
CSNK1E-205ENST00000405675 RPTORQ8N122 1335 aa32.24■■■□□ 2.75
CSNK1E-205ENST00000405675 GYPCP04921 128 aa32.24■■■□□ 2.75
CSNK1E-205ENST00000405675 UBXN1Q04323 297 aa32.24■■■□□ 2.75
CSNK1E-205ENST00000405675 PABPC4Q13310 644 aaKnown RBP eCLIP32.24■■■□□ 2.75
CSNK1E-205ENST00000405675 OTUD5Q96G74 571 aa32.24■■■□□ 2.75
CSNK1E-205ENST00000405675 POLR3CQ9BUI4 534 aaPredicted RBP32.24■■■□□ 2.75
CSNK1E-205ENST00000405675 LGALS16A8MUM7 142 aa32.23■■■□□ 2.75
CSNK1E-205ENST00000405675 IL31RAQ8NI17 732 aa32.23■■■□□ 2.75
CSNK1E-205ENST00000405675 CNOT6LQ96LI5 555 aaKnown RBP32.23■■■□□ 2.75
CSNK1E-205ENST00000405675 PRIMPOLQ96LW4 560 aa32.23■■■□□ 2.75
CSNK1E-205ENST00000405675 TBC1D7Q9P0N9 293 aa32.23■■■□□ 2.75
CSNK1E-205ENST00000405675 DNM3Q9UQ16 869 aa32.23■■■□□ 2.75
CSNK1E-205ENST00000405675 STK24Q9Y6E0 443 aa32.23■■■□□ 2.75
CSNK1E-205ENST00000405675 VWA5AO00534 786 aa32.23■■■□□ 2.75
CSNK1E-205ENST00000405675 CASP14P31944 242 aa32.23■■■□□ 2.75
CSNK1E-205ENST00000405675 GHRHRQ02643 423 aa32.23■■■□□ 2.75
CSNK1E-205ENST00000405675 ZNF507Q8TCN5 953 aa32.23■■■□□ 2.75
CSNK1E-205ENST00000405675 PCDHA2Q9Y5H9 948 aa32.23■■■□□ 2.75
CSNK1E-205ENST00000405675 NKRFO15226 690 aaKnown RBP eCLIP32.22■■■□□ 2.757e-9■■■□□ 16.7
CSNK1E-205ENST00000405675 CHMP2AO43633 222 aa32.22■■■□□ 2.75
CSNK1E-205ENST00000405675 FXR1P51114 621 aaKnown RBP eCLIP32.22■■■□□ 2.75
CSNK1E-205ENST00000405675 FAM26FQ5R3K3 315 aa32.22■■■□□ 2.75
CSNK1E-205ENST00000405675 CATSPERGQ6ZRH7 1159 aa32.22■■■□□ 2.75
CSNK1E-205ENST00000405675 UQCRHLA0A096LP55 91 aa32.21■■■□□ 2.75
CSNK1E-205ENST00000405675 IRF6O14896 467 aa32.21■■■□□ 2.75
CSNK1E-205ENST00000405675 ARHGAP6O43182 974 aa32.21■■■□□ 2.75
CSNK1E-205ENST00000405675 ZBED4O75132 1171 aa32.21■■■□□ 2.75
CSNK1E-205ENST00000405675 UQCRHP07919 91 aa32.21■■■□□ 2.75
CSNK1E-205ENST00000405675 PPP2R5CQ13362 524 aa32.21■■■□□ 2.75
CSNK1E-205ENST00000405675 PTPN14Q15678 1187 aa32.21■■■□□ 2.75
CSNK1E-205ENST00000405675 ARMC9Q7Z3E5 817 aa32.21■■■□□ 2.75
CSNK1E-205ENST00000405675 ERO1BQ86YB8 467 aa32.21■■■□□ 2.75
CSNK1E-205ENST00000405675 MCF2L2Q86YR7 1114 aa32.21■■■□□ 2.75
CSNK1E-205ENST00000405675 MB21D1Q8N884 522 aa32.21■■■□□ 2.75
CSNK1E-205ENST00000405675 SYT2Q8N9I0 419 aaPredicted RBP32.21■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms