RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-208ENST00000403461 SHISA4Q96DD7 197 aa8.37□□□□□ -1.07
CEACAM1-208ENST00000403461 SUCLG2Q96I99 432 aa8.37□□□□□ -1.07
CEACAM1-208ENST00000403461 RSRP1Q9BUV0 290 aa8.37□□□□□ -1.07
CEACAM1-208ENST00000403461 TMPRSS13Q9BYE2 586 aa8.37□□□□□ -1.07
CEACAM1-208ENST00000403461 PUS3Q9BZE2 481 aaKnown RBP8.37□□□□□ -1.07
CEACAM1-208ENST00000403461 CBX8Q9HC52 389 aa8.37□□□□□ -1.07
CEACAM1-208ENST00000403461 KRT82Q9NSB4 513 aa8.37□□□□□ -1.07
CEACAM1-208ENST00000403461 GNL3LQ9NVN8 582 aaKnown RBP8.37□□□□□ -1.07
CEACAM1-208ENST00000403461 TNPO2O14787 897 aaKnown RBP8.36□□□□□ -1.07
CEACAM1-208ENST00000403461 ALX3O95076 343 aa8.36□□□□□ -1.07
CEACAM1-208ENST00000403461 NBPF7P0C2Y1 421 aaPredicted RBP8.36□□□□□ -1.07
CEACAM1-208ENST00000403461 ZNF76P36508 570 aa8.36□□□□□ -1.07
CEACAM1-208ENST00000403461 TCP10Q12799 353 aa8.36□□□□□ -1.07
CEACAM1-208ENST00000403461 PWP1Q13610 501 aa8.36□□□□□ -1.07
CEACAM1-208ENST00000403461 RABL6Q3YEC7 729 aaPredicted RBP8.36□□□□□ -1.07
CEACAM1-208ENST00000403461 SCARA3Q6AZY7 606 aa8.36□□□□□ -1.07
CEACAM1-208ENST00000403461 HS2ST1Q7LGA3 356 aa8.36□□□□□ -1.07
CEACAM1-208ENST00000403461 GRIN3AQ8TCU5 1115 aa8.36□□□□□ -1.07
CEACAM1-208ENST00000403461 LPIN2Q92539 896 aa8.36□□□□□ -1.07
CEACAM1-208ENST00000403461 KCNB2Q92953 911 aa8.36□□□□□ -1.07
CEACAM1-208ENST00000403461 BICC1Q9H694 974 aaKnown RBP8.36□□□□□ -1.07
CEACAM1-208ENST00000403461 ADCY3O60266 1144 aa8.35□□□□□ -1.07
CEACAM1-208ENST00000403461 SGPL1O95470 568 aa8.35□□□□□ -1.07
CEACAM1-208ENST00000403461 TFRCP02786 760 aaKnown RBP8.35□□□□□ -1.07
CEACAM1-208ENST00000403461 CYP2C8P10632 490 aa8.35□□□□□ -1.07
CEACAM1-208ENST00000403461 NOS3P29474 1203 aa8.35□□□□□ -1.07
CEACAM1-208ENST00000403461 FANCCQ00597 558 aa8.35□□□□□ -1.07
CEACAM1-208ENST00000403461 HNRNPUQ00839 825 aaKnown RBP eCLIP8.35□□□□□ -1.07
CEACAM1-208ENST00000403461 PDE3AQ14432 1141 aa8.35□□□□□ -1.07
CEACAM1-208ENST00000403461 LRRC24Q50LG9 513 aa8.35□□□□□ -1.07
CEACAM1-208ENST00000403461 RASIP1Q5U651 963 aa8.35□□□□□ -1.07
CEACAM1-208ENST00000403461 LLGL2Q6P1M3 1020 aa8.35□□□□□ -1.07
CEACAM1-208ENST00000403461 AGMOQ6ZNB7 445 aa8.35□□□□□ -1.07
CEACAM1-208ENST00000403461 Q6ZS46 218 aa8.35□□□□□ -1.07
CEACAM1-208ENST00000403461 ERMP1Q7Z2K6 904 aa8.35□□□□□ -1.07
CEACAM1-208ENST00000403461 RELL1Q8IUW5 271 aa8.35□□□□□ -1.07
CEACAM1-208ENST00000403461 SCYL3Q8IZE3 742 aa8.35□□□□□ -1.07
CEACAM1-208ENST00000403461 AGGF1Q8N302 714 aaeCLIP8.35□□□□□ -1.07
CEACAM1-208ENST00000403461 COA7Q96BR5 231 aa8.35□□□□□ -1.07
CEACAM1-208ENST00000403461 CCDC86Q9H6F5 360 aaKnown RBP8.35□□□□□ -1.07
CEACAM1-208ENST00000403461 SUGCTQ9HAC7 445 aa8.35□□□□□ -1.07
CEACAM1-208ENST00000403461 TPSG1Q9NRR2 321 aa8.35□□□□□ -1.07
CEACAM1-208ENST00000403461 USP40Q9NVE5 1235 aa8.35□□□□□ -1.07
CEACAM1-208ENST00000403461 ZNF112Q9UJU3 913 aa8.35□□□□□ -1.07
CEACAM1-208ENST00000403461 SLC45A1Q9Y2W3 748 aa8.35□□□□□ -1.07
CEACAM1-208ENST00000403461 LRRFIP2Q9Y608 721 aaKnown RBP8.35□□□□□ -1.07
CEACAM1-208ENST00000403461 HTTP42858 3142 aa8.35□□□□□ -1.07
CEACAM1-208ENST00000403461 KIAA0100Q14667 2235 aaKnown RBP8.34□□□□□ -1.07
CEACAM1-208ENST00000403461 UTYO14607 1347 aa8.34□□□□□ -1.07
CEACAM1-208ENST00000403461 ADGRA2Q96PE1 1338 aa8.34□□□□□ -1.07
CEACAM1-208ENST00000403461 FLT3LGP49771 235 aa8.34□□□□□ -1.07
CEACAM1-208ENST00000403461 RSPO4Q2I0M5 234 aaPredicted RBP8.34□□□□□ -1.07
CEACAM1-208ENST00000403461 GADL1Q6ZQY3 521 aa8.34□□□□□ -1.07
CEACAM1-208ENST00000403461 UBE2Q1Q7Z7E8 422 aa8.34□□□□□ -1.07
CEACAM1-208ENST00000403461 ZGPATQ8N5A5 531 aaKnown RBP8.34□□□□□ -1.07
CEACAM1-208ENST00000403461 SMG8Q8ND04 991 aaKnown RBP8.34□□□□□ -1.07
CEACAM1-208ENST00000403461 RNF34Q969K3 372 aa8.34□□□□□ -1.07
CEACAM1-208ENST00000403461 PSMG3-AS1Q96PY0 264 aa8.34□□□□□ -1.07
CEACAM1-208ENST00000403461 KRTAP4-8Q9BYQ9 185 aa8.34□□□□□ -1.07
CEACAM1-208ENST00000403461 CYP4F12Q9HCS2 524 aa8.34□□□□□ -1.07
CEACAM1-208ENST00000403461 CACNA2D2Q9NY47 1150 aa8.34□□□□□ -1.07
CEACAM1-208ENST00000403461 GGT7Q9UJ14 662 aa8.34□□□□□ -1.07
CEACAM1-208ENST00000403461 DAGLAQ9Y4D2 1042 aa8.34□□□□□ -1.07
CEACAM1-208ENST00000403461 ZHX2Q9Y6X8 837 aa8.34□□□□□ -1.07
CEACAM1-208ENST00000403461 RBBP6Q7Z6E9 1792 aaKnown RBP8.34□□□□□ -1.07
CEACAM1-208ENST00000403461 ZNF646O15015 1829 aaPredicted RBP8.33□□□□□ -1.08
CEACAM1-208ENST00000403461 SPEF2Q9C093 1822 aa8.33□□□□□ -1.08
CEACAM1-208ENST00000403461 PTPRCP08575 1304 aa8.33□□□□□ -1.08
CEACAM1-208ENST00000403461 SYNGAP1Q96PV0 1343 aa8.33□□□□□ -1.08
CEACAM1-208ENST00000403461 EYA2O00167 538 aa8.33□□□□□ -1.08
CEACAM1-208ENST00000403461 ENTPD3O75355 529 aa8.33□□□□□ -1.08
CEACAM1-208ENST00000403461 CTGFP29279 349 aa8.33□□□□□ -1.08
CEACAM1-208ENST00000403461 NFIAQ12857 509 aa8.33□□□□□ -1.08
CEACAM1-208ENST00000403461 ANKRD34AQ69YU3 496 aa8.33□□□□□ -1.08
CEACAM1-208ENST00000403461 CDC42EP5Q6NZY7 148 aa8.33□□□□□ -1.08
CEACAM1-208ENST00000403461 DZIP1Q86YF9 867 aaKnown RBP8.33□□□□□ -1.08
CEACAM1-208ENST00000403461 ANKRD44Q8N8A2 993 aa8.33□□□□□ -1.08
CEACAM1-208ENST00000403461 VGLL2Q8N8G2 317 aa8.33□□□□□ -1.08
CEACAM1-208ENST00000403461 PHC3Q8NDX5 983 aa8.33□□□□□ -1.08
CEACAM1-208ENST00000403461 KAZALD1Q96I82 304 aa8.33□□□□□ -1.08
CEACAM1-208ENST00000403461 TMEM74Q96NL1 305 aa8.33□□□□□ -1.08
CEACAM1-208ENST00000403461 CEP41Q9BYV8 373 aa8.33□□□□□ -1.08
CEACAM1-208ENST00000403461 RAD18Q9NS91 495 aa8.33□□□□□ -1.08
CEACAM1-208ENST00000403461 DENND2AQ9ULE3 1009 aa8.33□□□□□ -1.08
CEACAM1-208ENST00000403461 HDAC5Q9UQL6 1122 aa8.33□□□□□ -1.08
CEACAM1-208ENST00000403461 MYH3P11055 1940 aa8.33□□□□□ -1.08
CEACAM1-208ENST00000403461 A0A0G2JLL6 359 aaPredicted RBP8.32□□□□□ -1.08
CEACAM1-208ENST00000403461 ZNF862O60290 1169 aa8.32□□□□□ -1.08
CEACAM1-208ENST00000403461 GLB1P16278 677 aa8.32□□□□□ -1.08
CEACAM1-208ENST00000403461 LIG1P18858 919 aa8.32□□□□□ -1.08
CEACAM1-208ENST00000403461 FGFR2P21802 821 aa8.32□□□□□ -1.08
CEACAM1-208ENST00000403461 PRDX5P30044 214 aa8.32□□□□□ -1.08
CEACAM1-208ENST00000403461 GBP2P32456 591 aaPredicted RBP8.32□□□□□ -1.08
CEACAM1-208ENST00000403461 PABPC4Q13310 644 aaKnown RBP eCLIP8.32□□□□□ -1.08
CEACAM1-208ENST00000403461 MOGSQ13724 837 aa8.32□□□□□ -1.08
CEACAM1-208ENST00000403461 ATP2B3Q16720 1220 aa8.32□□□□□ -1.08
CEACAM1-208ENST00000403461 FDX2Q6P4F2 183 aa8.32□□□□□ -1.08
CEACAM1-208ENST00000403461 NECAB2Q7Z6G3 386 aa8.32□□□□□ -1.08
CEACAM1-208ENST00000403461 PRRT2Q7Z6L0 340 aaPredicted RBP8.32□□□□□ -1.08
CEACAM1-208ENST00000403461 KLHDC4Q8TBB5 520 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms