RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 INO80BQ9C086 356 aaPredicted RBP3.55□□□□□ -1.84
KNL1-202ENST00000399668 KIF26BQ2KJY2 2108 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 SPATA31A3Q5VYP0 1347 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 CPSF1Q10570 1443 aaKnown RBP3.55□□□□□ -1.84
KNL1-202ENST00000399668 PTPRZ1P23471 2315 aaPredicted RBP3.55□□□□□ -1.84
KNL1-202ENST00000399668 LAD1O00515 517 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 KCNQ2O43526 872 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 GH2P01242 217 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 TFAMQ00059 246 aaKnown RBP3.55□□□□□ -1.84
KNL1-202ENST00000399668 KIF23Q02241 960 aaPredicted RBP3.55□□□□□ -1.84
KNL1-202ENST00000399668 TCP11X2Q5H9J9 407 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 CCDC62Q6P9F0 684 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 BRINP3Q76B58 766 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 KRT27Q7Z3Y8 459 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 DPP9Q86TI2 863 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 MCF2L2Q86YR7 1114 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 C7orf31Q8N865 590 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 ACRBPQ8NEB7 543 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 GOLGA5Q8TBA6 731 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 STAG1Q8WVM7 1258 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 PIGSQ96S52 555 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 DDX23Q9BUQ8 820 aaKnown RBP3.55□□□□□ -1.84
KNL1-202ENST00000399668 EPB41L5Q9HCM4 733 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 UBE2TQ9NPD8 197 aaPredicted RBP3.55□□□□□ -1.84
KNL1-202ENST00000399668 TSKSQ9UJT2 592 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 ATF5Q9Y2D1 282 aaPredicted RBP3.55□□□□□ -1.84
KNL1-202ENST00000399668 SCN9AQ15858 1988 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 PDCD11Q14690 1871 aaKnown RBP3.55□□□□□ -1.84
KNL1-202ENST00000399668 NCAPD2Q15021 1401 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 RGPD1P0DJD0 1748 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 MED14O60244 1454 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 PLA2G4BP0C869 781 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 IFNAR1P17181 557 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 CDC25BP30305 580 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 CUL4BQ13620 913 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 KMT5BQ4FZB7 885 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 RESP18Q5W5W9 173 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 PDXDC2PQ6P474 469 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 CCDC13Q8IYE1 715 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 NLGN1Q8N2Q7 840 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 CCDC51Q96ER9 411 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 CABS1Q96KC9 395 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 ADPGKQ9BRR6 497 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 PPP1R12CQ9BZL4 782 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 AS3MTQ9HBK9 375 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 SPC25Q9HBM1 224 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 KMT5AQ9NQR1 393 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 TBK1Q9UHD2 729 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 CPS1P31327 1500 aa3.55□□□□□ -1.84
KNL1-202ENST00000399668 MOCS3O95396 460 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 SSTR3P32745 418 aaPredicted RBP3.54□□□□□ -1.84
KNL1-202ENST00000399668 PSMC2P35998 433 aaKnown RBP3.54□□□□□ -1.84
KNL1-202ENST00000399668 PEX3P56589 373 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 SMAP1Q8IYB5 467 aaPredicted RBP3.54□□□□□ -1.84
KNL1-202ENST00000399668 FLAD1Q8NFF5 587 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 P2RX5Q93086 422 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 PAGE5Q96GU1 130 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 RASSF4Q9H2L5 321 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 TDRD3Q9H7E2 651 aaKnown RBP3.54□□□□□ -1.84
KNL1-202ENST00000399668 NHEJ1Q9H9Q4 299 aaPredicted RBP3.54□□□□□ -1.84
KNL1-202ENST00000399668 GPR108Q9NPR9 543 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 PFDN4Q9NQP4 134 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 PARP2Q9UGN5 583 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 ZNF148Q9UQR1 794 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 DLC1Q96QB1 1528 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 CEP170BQ9Y4F5 1589 aaPredicted RBP3.54□□□□□ -1.84
KNL1-202ENST00000399668 SYDE2Q5VT97 1194 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 HHATQ5VTY9 493 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 FYB2Q5VWT5 728 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 C4orf50Q6ZRC1 276 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 HACE1Q8IYU2 909 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 DCLK2Q8N568 766 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 CEP170P1Q96L14 293 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 KANSL2Q9H9L4 492 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 NXF1Q9UBU9 619 aaKnown RBP3.54□□□□□ -1.84
KNL1-202ENST00000399668 ATP8A1Q9Y2Q0 1164 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 ABCC12Q96J65 1359 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 FREM3P0C091 2139 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 POLEQ07864 2286 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.54□□□□□ -1.84
KNL1-202ENST00000399668 PNMA6FA0A0J9YX94 578 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 MYO1FO00160 1098 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 CLTAP09496 248 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 TMEM191BP0C7N4 346 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 LMNB1P20700 586 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 PCK1P35558 622 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 LIFRP42702 1097 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 BAG6P46379 1132 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 PTK2Q05397 1052 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 PNMA8AQ86V59 439 aaPredicted RBP3.54□□□□□ -1.84
KNL1-202ENST00000399668 CCDC117Q8IWD4 279 aaPredicted RBP3.54□□□□□ -1.84
KNL1-202ENST00000399668 BCAS4Q8TDM0 211 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 MRFAP1L1Q96HT8 127 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 DHTKD1Q96HY7 919 aaPredicted RBP3.54□□□□□ -1.84
KNL1-202ENST00000399668 ALPK2Q86TB3 2170 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 F5P12259 2224 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 K7ERI5 159 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 RNF8O76064 485 aa3.54□□□□□ -1.84
KNL1-202ENST00000399668 SEC31AO94979 1220 aaKnown RBP3.54□□□□□ -1.84
KNL1-202ENST00000399668 NDUFA10O95299 355 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms