RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 CCDC144BQ3MJ40 725 aa12.02□□□□□ -0.49
CACNA1C-217ENST00000399641 ATG16L1Q676U5 607 aa12.02□□□□□ -0.49
CACNA1C-217ENST00000399641 FRA10AC1Q70Z53 315 aa12.02□□□□□ -0.49
CACNA1C-217ENST00000399641 ARHGAP18Q8N392 663 aa12.02□□□□□ -0.49
CACNA1C-217ENST00000399641 LSM14BQ9BX40 385 aaKnown RBP12.02□□□□□ -0.49
CACNA1C-217ENST00000399641 SMYD3Q9H7B4 428 aa12.02□□□□□ -0.49
CACNA1C-217ENST00000399641 CTSWP56202 376 aa12.02□□□□□ -0.49
CACNA1C-217ENST00000399641 CTDSPL2Q05D32 466 aa12.02□□□□□ -0.49
CACNA1C-217ENST00000399641 DMP1Q13316 513 aaPredicted RBP12.02□□□□□ -0.49
CACNA1C-217ENST00000399641 DCAF4L1Q3SXM0 396 aa12.02□□□□□ -0.49
CACNA1C-217ENST00000399641 OLFML2BQ68BL8 750 aa12.02□□□□□ -0.49
CACNA1C-217ENST00000399641 SLFN13Q68D06 897 aa12.02□□□□□ -0.49
CACNA1C-217ENST00000399641 CCNYQ8ND76 341 aa12.02□□□□□ -0.49
CACNA1C-217ENST00000399641 ARPP21Q9UBL0 812 aaPredicted RBP12.02□□□□□ -0.49
CACNA1C-217ENST00000399641 CYP26C1Q6V0L0 522 aa12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 APOBEC3FQ8IUX4 373 aaKnown RBP12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 GTF2A1LQ9UNN4 478 aa12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 SOX11P35716 441 aa12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 THOC5Q13769 683 aaKnown RBP12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 GCKRQ14397 625 aa12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 C11orf88Q6PI97 169 aa12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 KRT25Q7Z3Z0 450 aa12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 OTUD5Q96G74 571 aa12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 BLZF1Q9H2G9 400 aa12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 MOCS3O95396 460 aa12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 MYL1P05976 194 aa12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 PASD1Q8IV76 773 aa12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 MPP4Q96JB8 637 aa12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 SARS2Q9NP81 518 aaKnown RBP12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 TAB2Q9NYJ8 693 aa12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 STMN3Q9NZ72 180 aa12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 V9GY48 417 aaPredicted RBP12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 ZNF608Q9ULD9 1512 aaPredicted RBP12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 USP17L8P0C7I0 530 aa12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 GYG1P46976 350 aa12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 EPHB1P54762 984 aa12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 PLIN5Q00G26 463 aa12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 PWP1Q13610 501 aa12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 PDXDC1Q6P996 788 aa12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 RFX8Q6ZV50 586 aa12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 MAML1Q92585 1016 aa12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 USE1Q9NZ43 259 aa12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 TBK1Q9UHD2 729 aa12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 TPCN1Q9ULQ1 816 aa12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 HMGXB3Q12766 1538 aa12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 ATP10AO60312 1499 aa12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 A0A1B0GVL5 298 aa12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 CLCN1P35523 988 aa12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 GPR1P46091 355 aa12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 TAF11Q15544 211 aa12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 GRAMD1BQ3KR37 738 aa12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 BTNL9Q6UXG8 535 aa12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 DISC1Q9NRI5 854 aa12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 STX18Q9P2W9 335 aaKnown RBP12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 FPGT-TNNI3KV9GXZ4 949 aa12.01□□□□□ -0.49
CACNA1C-217ENST00000399641 UBN2Q6ZU65 1347 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 GDF11O95390 407 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 RBBP7Q16576 425 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 UVSSAQ2YD98 709 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 RNF139Q8WU17 664 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 RIC8AQ9NPQ8 531 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 KIAA1468Q9P260 1216 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 ZNF804BA4D1E1 1349 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 KCNK3O14649 394 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 RHOBTB1O94844 696 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 ARF4P18085 180 aaPredicted RBP12□□□□□ -0.49
CACNA1C-217ENST00000399641 KCTD16Q68DU8 428 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 FGD2Q7Z6J4 655 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 NDUFAF2Q8N183 169 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 THEM5Q8N1Q8 247 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 DEPDC1BQ8WUY9 529 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 MEIS3Q99687 375 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 MFSD1Q9H3U5 465 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 PARVBQ9HBI1 364 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 CACNA2D2Q9NY47 1150 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 A6NJR5 290 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 NDUFB5O43674 189 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 BBOX1O75936 387 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 ARF5P84085 180 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 LAMC2Q13753 1193 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 ZNF394Q53GI3 561 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 PLA2G4DQ86XP0 818 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 SPTLC2O15270 562 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 HSPD1P10809 573 aaKnown RBP12□□□□□ -0.49
CACNA1C-217ENST00000399641 MARK3P27448 753 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 TYRO3Q06418 890 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 MXD4Q14582 209 aaPredicted RBP12□□□□□ -0.49
CACNA1C-217ENST00000399641 ALFQ53S48 1182 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 FAM117BQ6P1L5 589 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 CNNM4Q6P4Q7 775 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 TTC25Q96NG3 672 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 MYCBPQ99417 103 aaPredicted RBP12□□□□□ -0.49
CACNA1C-217ENST00000399641 NDEL1Q9GZM8 345 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 PSTPIP2Q9H939 334 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 LRWD1Q9UFC0 647 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 FARP1Q9Y4F1 1045 aaPredicted RBP12□□□□□ -0.49
CACNA1C-217ENST00000399641 HSD3B2P26439 372 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 TRPC1P48995 793 aa12□□□□□ -0.49
CACNA1C-217ENST00000399641 ZNF75DP51815 510 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms