RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 NR5A1Q13285 461 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 TRMT10CQ7L0Y3 403 aaKnown RBP10.13□□□□□ -0.79
ATL3-201ENST00000398868 TBCKQ8TEA7 893 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 CPSF3Q9UKF6 684 aaKnown RBP10.13□□□□□ -0.79
ATL3-201ENST00000398868 PPFIA4O75335 1185 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 KRT14P02533 472 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 OR52Z1P0C646 297 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 PMS1P54277 932 aaKnown RBP10.13□□□□□ -0.79
ATL3-201ENST00000398868 SKOR1P84550 965 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 HDLBPQ00341 1268 aaKnown RBP10.13□□□□□ -0.79
ATL3-201ENST00000398868 ACTN3Q08043 901 aaPredicted RBP10.13□□□□□ -0.79
ATL3-201ENST00000398868 SLC27A3Q5K4L6 730 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 CALN1Q9BXU9 219 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 CCDC68Q9H2F9 335 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 Q9H521 79 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 ZNF711Q9Y462 761 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 ECE2O60344 883 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 NDUFA8P51970 172 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 RINLQ6ZS11 566 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 GAS2L3Q86XJ1 694 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 FLAD1Q8NFF5 587 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 ATP2A3Q93084 1043 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 USP44Q9H0E7 712 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 ZNF148Q9UQR1 794 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 N4BP1O75113 896 aaKnown RBP10.12□□□□□ -0.79
ATL3-201ENST00000398868 EEF1GP26641 437 aaKnown RBP10.12□□□□□ -0.79
ATL3-201ENST00000398868 EEF1DP29692 281 aaKnown RBP10.12□□□□□ -0.79
ATL3-201ENST00000398868 ADCK5Q3MIX3 580 aa10.12□□□□□ -0.79
ATL3-201ENST00000398868 ZBTB41Q5SVQ8 909 aa10.12□□□□□ -0.79
ATL3-201ENST00000398868 TESK2Q96S53 571 aa10.12□□□□□ -0.79
ATL3-201ENST00000398868 ANGPTL3Q9Y5C1 460 aa10.12□□□□□ -0.79
ATL3-201ENST00000398868 EPHB1P54762 984 aa10.12□□□□□ -0.79
ATL3-201ENST00000398868 RAET1EQ8TD07 263 aa10.12□□□□□ -0.79
ATL3-201ENST00000398868 LRGUKQ96M69 825 aa10.12□□□□□ -0.79
ATL3-201ENST00000398868 TYW5A2RUC4 315 aaKnown RBP10.12□□□□□ -0.79
ATL3-201ENST00000398868 GUCY2CP25092 1073 aa10.12□□□□□ -0.79
ATL3-201ENST00000398868 SCRN1Q12765 414 aa10.12□□□□□ -0.79
ATL3-201ENST00000398868 TRIM14Q14142 442 aa10.12□□□□□ -0.79
ATL3-201ENST00000398868 TWF2Q6IBS0 349 aaKnown RBP10.12□□□□□ -0.79
ATL3-201ENST00000398868 TMTC1Q8IUR5 882 aa10.12□□□□□ -0.79
ATL3-201ENST00000398868 DNAAF3Q8N9W5 541 aa10.12□□□□□ -0.79
ATL3-201ENST00000398868 OR6B3Q8NGW1 331 aa10.12□□□□□ -0.79
ATL3-201ENST00000398868 GPT2Q8TD30 523 aa10.12□□□□□ -0.79
ATL3-201ENST00000398868 IWS1Q96ST2 819 aa10.12□□□□□ -0.79
ATL3-201ENST00000398868 YY1AP1Q9H869 796 aa10.12□□□□□ -0.79
ATL3-201ENST00000398868 TRPC7Q9HCX4 862 aa10.12□□□□□ -0.79
ATL3-201ENST00000398868 SARS2Q9NP81 518 aaKnown RBP10.12□□□□□ -0.79
ATL3-201ENST00000398868 SCHIP1Q9P0W5 487 aaPredicted RBP10.12□□□□□ -0.79
ATL3-201ENST00000398868 ITM2BQ9Y287 266 aa10.12□□□□□ -0.79
ATL3-201ENST00000398868 NUP153P49790 1475 aaKnown RBP10.12□□□□□ -0.79
ATL3-201ENST00000398868 H0Y3Z8 333 aa10.12□□□□□ -0.79
ATL3-201ENST00000398868 CHL1O00533 1208 aa10.12□□□□□ -0.79
ATL3-201ENST00000398868 RETREG2Q8NC44 543 aa10.12□□□□□ -0.79
ATL3-201ENST00000398868 LRRC8CQ8TDW0 803 aa10.12□□□□□ -0.79
ATL3-201ENST00000398868 SLC7A3Q8WY07 619 aa10.12□□□□□ -0.79
ATL3-201ENST00000398868 PPP1R13BQ96KQ4 1090 aa10.12□□□□□ -0.79
ATL3-201ENST00000398868 SCOCQ9UIL1 159 aa10.12□□□□□ -0.79
ATL3-201ENST00000398868 NEMP1O14524 444 aa10.12□□□□□ -0.79
ATL3-201ENST00000398868 PDE8BO95263 885 aa10.12□□□□□ -0.79
ATL3-201ENST00000398868 BMP3P12645 472 aa10.12□□□□□ -0.79
ATL3-201ENST00000398868 SYDE2Q5VT97 1194 aa10.12□□□□□ -0.79
ATL3-201ENST00000398868 FAM47EQ6ZV65 393 aa10.12□□□□□ -0.79
ATL3-201ENST00000398868 YIPF2Q9BWQ6 316 aa10.12□□□□□ -0.79
ATL3-201ENST00000398868 AFF4Q9UHB7 1163 aaKnown RBP10.12□□□□□ -0.79
ATL3-201ENST00000398868 NOC2LQ9Y3T9 749 aaKnown RBP10.12□□□□□ -0.79
ATL3-201ENST00000398868 RFX8Q6ZV50 586 aa10.12□□□□□ -0.79
ATL3-201ENST00000398868 CCDC84Q86UT8 332 aaPredicted RBP10.11□□□□□ -0.79
ATL3-201ENST00000398868 EFCAB13Q8IY85 973 aa10.11□□□□□ -0.79
ATL3-201ENST00000398868 CCDC197Q8NCU1 140 aa10.11□□□□□ -0.79
ATL3-201ENST00000398868 TTLL11Q8NHH1 800 aa10.11□□□□□ -0.79
ATL3-201ENST00000398868 LZTS1Q9Y250 596 aa10.11□□□□□ -0.79
ATL3-201ENST00000398868 PEX3P56589 373 aa10.11□□□□□ -0.79
ATL3-201ENST00000398868 RHPN2Q8IUC4 686 aa10.11□□□□□ -0.79
ATL3-201ENST00000398868 A6NNZ2 444 aa10.11□□□□□ -0.79
ATL3-201ENST00000398868 RPN1P04843 607 aaKnown RBP10.11□□□□□ -0.79
ATL3-201ENST00000398868 YWHAGP61981 247 aaKnown RBP eCLIP10.11□□□□□ -0.79
ATL3-201ENST00000398868 TUBB2AQ13885 445 aa10.11□□□□□ -0.79
ATL3-201ENST00000398868 TUBB8Q3ZCM7 444 aa10.11□□□□□ -0.79
ATL3-201ENST00000398868 VWA3BQ502W6 1294 aa10.11□□□□□ -0.79
ATL3-201ENST00000398868 ACBD5Q5T8D3 534 aaPredicted RBP10.11□□□□□ -0.79
ATL3-201ENST00000398868 OR6B2Q6IFH4 312 aa10.11□□□□□ -0.79
ATL3-201ENST00000398868 GCNAQ96QF7 691 aa10.11□□□□□ -0.79
ATL3-201ENST00000398868 TUBB2BQ9BVA1 445 aa10.11□□□□□ -0.79
ATL3-201ENST00000398868 RAB17Q9H0T7 212 aa10.11□□□□□ -0.79
ATL3-201ENST00000398868 UBE2TQ9NPD8 197 aaPredicted RBP10.11□□□□□ -0.79
ATL3-201ENST00000398868 AMFRQ9UKV5 643 aa10.11□□□□□ -0.79
ATL3-201ENST00000398868 SYF2O95926 243 aaKnown RBP10.11□□□□□ -0.79
ATL3-201ENST00000398868 MYL1P05976 194 aa10.11□□□□□ -0.79
ATL3-201ENST00000398868 CASP1P29466 404 aa10.11□□□□□ -0.79
ATL3-201ENST00000398868 PGBD3Q8N328 593 aa10.11□□□□□ -0.79
ATL3-201ENST00000398868 CCDC138Q96M89 665 aa10.11□□□□□ -0.79
ATL3-201ENST00000398868 INTS9Q9NV88 658 aaKnown RBP10.11□□□□□ -0.79
ATL3-201ENST00000398868 PRR23AA6NEV1 266 aa10.11□□□□□ -0.79
ATL3-201ENST00000398868 EFCAB8A8MWE9 144 aa10.11□□□□□ -0.79
ATL3-201ENST00000398868 GFPT2O94808 682 aa10.11□□□□□ -0.79
ATL3-201ENST00000398868 KRT82Q9NSB4 513 aa10.11□□□□□ -0.79
ATL3-201ENST00000398868 EDC4Q6P2E9 1401 aaKnown RBP10.11□□□□□ -0.79
ATL3-201ENST00000398868 C2CD2LO14523 706 aa10.11□□□□□ -0.79
ATL3-201ENST00000398868 SPP2Q13103 211 aa10.11□□□□□ -0.79
ATL3-201ENST00000398868 ZC3H18Q86VM9 953 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms