RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 FRMD3A2A2Y4 597 aa15.34■□□□□ 0.05
PRAME-202ENST00000398743 FAM86B1E9PN63 330 aa15.34■□□□□ 0.05
PRAME-202ENST00000398743 GNA14O95837 355 aa15.34■□□□□ 0.05
PRAME-202ENST00000398743 FAM86B2P0C5J1 330 aa15.34■□□□□ 0.05
PRAME-202ENST00000398743 CACNB1Q02641 598 aaPredicted RBP15.34■□□□□ 0.05
PRAME-202ENST00000398743 RRP1BQ14684 758 aaKnown RBP15.34■□□□□ 0.05
PRAME-202ENST00000398743 BRD3Q15059 726 aa15.34■□□□□ 0.05
PRAME-202ENST00000398743 SPA17Q15506 151 aa15.34■□□□□ 0.05
PRAME-202ENST00000398743 UTP14CQ5TAP6 766 aaKnown RBP15.34■□□□□ 0.05
PRAME-202ENST00000398743 NCAPH2Q6IBW4 605 aa15.34■□□□□ 0.05
PRAME-202ENST00000398743 TRAPPC11Q7Z392 1133 aa15.34■□□□□ 0.05
PRAME-202ENST00000398743 CATSPER3Q86XQ3 398 aa15.34■□□□□ 0.05
PRAME-202ENST00000398743 FAM20AQ96MK3 541 aa15.34■□□□□ 0.05
PRAME-202ENST00000398743 FGFBP2Q9BYJ0 223 aa15.34■□□□□ 0.05
PRAME-202ENST00000398743 TSGA10Q9BZW7 698 aa15.34■□□□□ 0.05
PRAME-202ENST00000398743 ANKZF1Q9H8Y5 726 aa15.34■□□□□ 0.05
PRAME-202ENST00000398743 TFRCP02786 760 aaKnown RBP15.33■□□□□ 0.04
PRAME-202ENST00000398743 ERCC3P19447 782 aa15.33■□□□□ 0.04
PRAME-202ENST00000398743 RPA1P27694 616 aa15.33■□□□□ 0.04
PRAME-202ENST00000398743 CIITAP33076 1130 aa15.33■□□□□ 0.04
PRAME-202ENST00000398743 STAT2P52630 851 aa15.33■□□□□ 0.04
PRAME-202ENST00000398743 VAV2P52735 878 aa15.33■□□□□ 0.04
PRAME-202ENST00000398743 KIF5AQ12840 1032 aa15.33■□□□□ 0.04
PRAME-202ENST00000398743 SPICE1Q8N0Z3 855 aa15.33■□□□□ 0.04
PRAME-202ENST00000398743 NEK11Q8NG66 645 aa15.33■□□□□ 0.04
PRAME-202ENST00000398743 LACRTQ9GZZ8 138 aa15.33■□□□□ 0.04
PRAME-202ENST00000398743 ZMYND15Q9H091 742 aa15.33■□□□□ 0.04
PRAME-202ENST00000398743 ARHGEF10LQ9HCE6 1279 aa15.33■□□□□ 0.04
PRAME-202ENST00000398743 EMILIN3Q9NT22 766 aa15.33■□□□□ 0.04
PRAME-202ENST00000398743 PRR12Q9ULL5 1215 aa15.33■□□□□ 0.04
PRAME-202ENST00000398743 RCCD1A6NED2 376 aa15.32■□□□□ 0.04
PRAME-202ENST00000398743 LRRC53A6NM62 1247 aa15.32■□□□□ 0.04
PRAME-202ENST00000398743 PIK3CDO00329 1044 aa15.32■□□□□ 0.04
PRAME-202ENST00000398743 ENC1O14682 589 aa15.32■□□□□ 0.04
PRAME-202ENST00000398743 C21orf2O43822 256 aa15.32■□□□□ 0.04
PRAME-202ENST00000398743 CYP27A1Q02318 531 aa15.32■□□□□ 0.04
PRAME-202ENST00000398743 RAD51AP2Q09MP3 1159 aa15.32■□□□□ 0.04
PRAME-202ENST00000398743 SLC15A2Q16348 729 aa15.32■□□□□ 0.04
PRAME-202ENST00000398743 ARSHQ5FYA8 562 aa15.32■□□□□ 0.04
PRAME-202ENST00000398743 NELFCDQ8IXH7 590 aa15.32■□□□□ 0.04
PRAME-202ENST00000398743 MSANTD4Q8NCY6 345 aa15.32■□□□□ 0.04
PRAME-202ENST00000398743 SCFD1Q8WVM8 642 aa15.32■□□□□ 0.04
PRAME-202ENST00000398743 EDEM3Q9BZQ6 932 aa15.32■□□□□ 0.04
PRAME-202ENST00000398743 DEF6Q9H4E7 631 aa15.32■□□□□ 0.04
PRAME-202ENST00000398743 ARHGAP20Q9P2F6 1191 aa15.32■□□□□ 0.04
PRAME-202ENST00000398743 DNM3Q9UQ16 869 aa15.32■□□□□ 0.04
PRAME-202ENST00000398743 SAR1BQ9Y6B6 198 aa15.32■□□□□ 0.04
PRAME-202ENST00000398743 SPDYE2BA6NHP3 402 aa15.32■□□□□ 0.04
PRAME-202ENST00000398743 TCP10L2B9ZVM9 353 aa15.32■□□□□ 0.04
PRAME-202ENST00000398743 OPLAHO14841 1288 aa15.32■□□□□ 0.04
PRAME-202ENST00000398743 TBC1D8O95759 1140 aa15.32■□□□□ 0.04
PRAME-202ENST00000398743 PLEKP08567 350 aaPredicted RBP15.32■□□□□ 0.04
PRAME-202ENST00000398743 SPDYE6P0CI01 402 aa15.32■□□□□ 0.04
PRAME-202ENST00000398743 HOXA13P31271 388 aaPredicted RBP15.32■□□□□ 0.04
PRAME-202ENST00000398743 PLA2G4AP47712 749 aa15.32■□□□□ 0.04
PRAME-202ENST00000398743 TRAF1Q13077 416 aa15.32■□□□□ 0.04
PRAME-202ENST00000398743 PPP4R3CPQ6ZMV5 832 aa15.32■□□□□ 0.04
PRAME-202ENST00000398743 RRAGAQ7L523 313 aa15.32■□□□□ 0.04
PRAME-202ENST00000398743 CACNA2D4Q7Z3S7 1137 aa15.32■□□□□ 0.04
PRAME-202ENST00000398743 PURBQ96QR8 312 aaKnown RBP15.32■□□□□ 0.04
PRAME-202ENST00000398743 KCTD10Q9H3F6 313 aa15.32■□□□□ 0.04
PRAME-202ENST00000398743 ZHX3Q9H4I2 956 aa15.32■□□□□ 0.04
PRAME-202ENST00000398743 ZNF263O14978 683 aa15.31■□□□□ 0.04
PRAME-202ENST00000398743 MSH4O15457 936 aa15.31■□□□□ 0.04
PRAME-202ENST00000398743 ATP1A1P05023 1023 aaKnown RBP15.31■□□□□ 0.04
PRAME-202ENST00000398743 TAL1P17542 331 aaPredicted RBP15.31■□□□□ 0.04
PRAME-202ENST00000398743 ECE1P42892 770 aa15.31■□□□□ 0.04
PRAME-202ENST00000398743 KIF11P52732 1056 aa15.31■□□□□ 0.04
PRAME-202ENST00000398743 MARSP56192 900 aaKnown RBP15.31■□□□□ 0.04
PRAME-202ENST00000398743 PAPD7Q5XG87 772 aaKnown RBP15.31■□□□□ 0.04
PRAME-202ENST00000398743 RSBN1LQ6PCB5 846 aaPredicted RBP15.31■□□□□ 0.04
PRAME-202ENST00000398743 ARHGAP27Q6ZUM4 889 aa15.31■□□□□ 0.04
PRAME-202ENST00000398743 SYT2Q8N9I0 419 aaPredicted RBP15.31■□□□□ 0.04
PRAME-202ENST00000398743 BAP1Q92560 729 aa15.31■□□□□ 0.04
PRAME-202ENST00000398743 SECISBP2LQ93073 1101 aaKnown RBP15.31■□□□□ 0.04
PRAME-202ENST00000398743 RAB21Q9UL25 225 aa15.31■□□□□ 0.04
PRAME-202ENST00000398743 TNS1Q9HBL0 1735 aaKnown RBP15.31■□□□□ 0.04
PRAME-202ENST00000398743 RGPD3A6NKT7 1758 aaPredicted RBP15.31■□□□□ 0.04
PRAME-202ENST00000398743 RGPD4Q7Z3J3 1758 aa15.31■□□□□ 0.04
PRAME-202ENST00000398743 ANO9A1A5B4 782 aa15.31■□□□□ 0.04
PRAME-202ENST00000398743 USO1O60763 962 aaKnown RBP15.31■□□□□ 0.04
PRAME-202ENST00000398743 CYP3A4P08684 503 aa15.31■□□□□ 0.04
PRAME-202ENST00000398743 SPATA31C1P0DKV0 1188 aa15.31■□□□□ 0.04
PRAME-202ENST00000398743 ZNF76P36508 570 aa15.31■□□□□ 0.04
PRAME-202ENST00000398743 KRT26Q7Z3Y9 468 aa15.31■□□□□ 0.04
PRAME-202ENST00000398743 TEX2Q8IWB9 1127 aa15.31■□□□□ 0.04
PRAME-202ENST00000398743 CCDC155Q8N6L0 562 aa15.31■□□□□ 0.04
PRAME-202ENST00000398743 HNRNPLLQ8WVV9 542 aaKnown RBP15.31■□□□□ 0.04
PRAME-202ENST00000398743 IFIH1Q9BYX4 1025 aaKnown RBP15.31■□□□□ 0.04
PRAME-202ENST00000398743 GOPCQ9HD26 462 aa15.31■□□□□ 0.04
PRAME-202ENST00000398743 HDAC6Q9UBN7 1215 aa15.31■□□□□ 0.04
PRAME-202ENST00000398743 CLRN2A0PK11 232 aa15.3■□□□□ 0.04
PRAME-202ENST00000398743 MACROD2A1Z1Q3 448 aa15.3■□□□□ 0.04
PRAME-202ENST00000398743 MEIS1O00470 390 aa15.3■□□□□ 0.04
PRAME-202ENST00000398743 SASH3O75995 380 aa15.3■□□□□ 0.04
PRAME-202ENST00000398743 LCA5LO95447 670 aa15.3■□□□□ 0.04
PRAME-202ENST00000398743 EIF4A3P38919 411 aaKnown RBP15.3■□□□□ 0.04
PRAME-202ENST00000398743 PSMC6P62333 389 aa15.3■□□□□ 0.04
PRAME-202ENST00000398743 KCNMA1Q12791 1236 aa15.3■□□□□ 0.04
PRAME-202ENST00000398743 PABPC4Q13310 644 aaKnown RBP eCLIP15.3■□□□□ 0.044e-75■□□□□ 10.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms