RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 CBFA2T2O43439 604 aa4.13□□□□□ -1.75
CD47-203ENST00000398258 B4GALT4O60513 344 aa4.13□□□□□ -1.75
CD47-203ENST00000398258 GJB6O95452 261 aa4.13□□□□□ -1.75
CD47-203ENST00000398258 FUCA1P04066 466 aa4.13□□□□□ -1.75
CD47-203ENST00000398258 IL13P35225 146 aa4.13□□□□□ -1.75
CD47-203ENST00000398258 ZNF143P52747 638 aaPredicted RBP4.13□□□□□ -1.75
CD47-203ENST00000398258 PURAQ00577 322 aaKnown RBP4.13□□□□□ -1.75
CD47-203ENST00000398258 ABHD18Q0P651 414 aa4.13□□□□□ -1.75
CD47-203ENST00000398258 NOL9Q5SY16 702 aaKnown RBP4.13□□□□□ -1.75
CD47-203ENST00000398258 MRM1Q6IN84 353 aaKnown RBP4.13□□□□□ -1.75
CD47-203ENST00000398258 ARHGEF18Q6ZSZ5 1173 aa4.13□□□□□ -1.75
CD47-203ENST00000398258 LDLRAD3Q86YD5 345 aa4.13□□□□□ -1.75
CD47-203ENST00000398258 FAM178BQ8IXR5 827 aa4.13□□□□□ -1.75
CD47-203ENST00000398258 KLHL6Q8WZ60 621 aa4.13□□□□□ -1.75
CD47-203ENST00000398258 DPF3Q92784 378 aa4.13□□□□□ -1.75
CD47-203ENST00000398258 EXTL1Q92935 676 aa4.13□□□□□ -1.75
CD47-203ENST00000398258 RNPC3Q96LT9 517 aaKnown RBP4.13□□□□□ -1.75
CD47-203ENST00000398258 SRPK1Q96SB4 655 aaKnown RBP4.13□□□□□ -1.75
CD47-203ENST00000398258 EPN3Q9H201 632 aa4.13□□□□□ -1.75
CD47-203ENST00000398258 C7orf72A4D263 438 aa4.12□□□□□ -1.75
CD47-203ENST00000398258 CNOT4O95628 575 aaKnown RBP4.12□□□□□ -1.75
CD47-203ENST00000398258 CYP1A1P04798 512 aaPredicted RBP4.12□□□□□ -1.75
CD47-203ENST00000398258 PPP2R5DQ14738 602 aa4.12□□□□□ -1.75
CD47-203ENST00000398258 GNPTABQ3T906 1256 aa4.12□□□□□ -1.75
CD47-203ENST00000398258 PRAMEF18Q5VWM3 479 aa4.12□□□□□ -1.75
CD47-203ENST00000398258 EGFLAMQ63HQ2 1017 aa4.12□□□□□ -1.75
CD47-203ENST00000398258 SDE2Q6IQ49 451 aa4.12□□□□□ -1.75
CD47-203ENST00000398258 TCTN3Q6NUS6 607 aa4.12□□□□□ -1.75
CD47-203ENST00000398258 C6orf15Q6UXA7 325 aaPredicted RBP4.12□□□□□ -1.75
CD47-203ENST00000398258 DNAJC10Q8IXB1 793 aa4.12□□□□□ -1.75
CD47-203ENST00000398258 SMARCC1Q92922 1105 aaPredicted RBP4.12□□□□□ -1.75
CD47-203ENST00000398258 VOPP1Q96AW1 172 aa4.12□□□□□ -1.75
CD47-203ENST00000398258 AGAP2Q99490 1192 aa4.12□□□□□ -1.75
CD47-203ENST00000398258 SEMA4AQ9H3S1 761 aa4.12□□□□□ -1.75
CD47-203ENST00000398258 JADE2Q9NQC1 790 aa4.12□□□□□ -1.75
CD47-203ENST00000398258 VAMP4O75379 141 aa4.11□□□□□ -1.75
CD47-203ENST00000398258 CAPNS1P04632 268 aa4.11□□□□□ -1.75
CD47-203ENST00000398258 HSD3B2P26439 372 aa4.11□□□□□ -1.75
CD47-203ENST00000398258 SLC7A5Q01650 507 aa4.11□□□□□ -1.75
CD47-203ENST00000398258 NRN1LQ496H8 165 aa4.11□□□□□ -1.75
CD47-203ENST00000398258 USP39Q53GS9 565 aaKnown RBP4.11□□□□□ -1.75
CD47-203ENST00000398258 EEF1DP3Q658K8 133 aa4.11□□□□□ -1.75
CD47-203ENST00000398258 LARP1BQ659C4 914 aaKnown RBP4.11□□□□□ -1.75
CD47-203ENST00000398258 VHLLQ6RSH7 139 aa4.11□□□□□ -1.75
CD47-203ENST00000398258 FAM126BQ8IXS8 530 aa4.11□□□□□ -1.75
CD47-203ENST00000398258 LILRB2Q8N423 598 aa4.11□□□□□ -1.75
CD47-203ENST00000398258 ADCY4Q8NFM4 1077 aa4.11□□□□□ -1.75
CD47-203ENST00000398258 HAUS7Q99871 368 aa4.11□□□□□ -1.75
CD47-203ENST00000398258 ST7Q9NRC1 585 aa4.11□□□□□ -1.75
CD47-203ENST00000398258 MRPL42Q9Y6G3 142 aaKnown RBP4.11□□□□□ -1.75
CD47-203ENST00000398258 A0A087X1B8 175 aa4.1□□□□□ -1.75
CD47-203ENST00000398258 B2RBV5 119 aa4.1□□□□□ -1.75
CD47-203ENST00000398258 DDAH1O94760 285 aa4.1□□□□□ -1.75
CD47-203ENST00000398258 EPHX1P07099 455 aa4.1□□□□□ -1.75
CD47-203ENST00000398258 COL6A1P12109 1028 aa4.1□□□□□ -1.75
CD47-203ENST00000398258 PTH1RQ03431 593 aa4.1□□□□□ -1.75
CD47-203ENST00000398258 LONRF2Q1L5Z9 754 aa4.1□□□□□ -1.75
CD47-203ENST00000398258 PLEKHG4Q58EX7 1191 aa4.1□□□□□ -1.75
CD47-203ENST00000398258 FNDC7Q5VTL7 733 aa4.1□□□□□ -1.75
CD47-203ENST00000398258 HEATR6Q6AI08 1181 aaKnown RBP4.1□□□□□ -1.75
CD47-203ENST00000398258 KIAA1211LQ6NV74 962 aa4.1□□□□□ -1.75
CD47-203ENST00000398258 EEPD1Q7L9B9 569 aa4.1□□□□□ -1.75
CD47-203ENST00000398258 ZNF513Q8N8E2 541 aaPredicted RBP4.1□□□□□ -1.75
CD47-203ENST00000398258 SGSM3Q96HU1 749 aa4.1□□□□□ -1.75
CD47-203ENST00000398258 FGD4Q96M96 766 aa4.1□□□□□ -1.75
CD47-203ENST00000398258 ADOQ96SZ5 270 aa4.1□□□□□ -1.75
CD47-203ENST00000398258 DNAJC7Q99615 494 aa4.1□□□□□ -1.75
CD47-203ENST00000398258 TMEM168Q9H0V1 697 aa4.1□□□□□ -1.75
CD47-203ENST00000398258 PCDH18Q9HCL0 1135 aa4.1□□□□□ -1.75
CD47-203ENST00000398258 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.1□□□□□ -1.75
CD47-203ENST00000398258 SF3B6Q9Y3B4 125 aaKnown RBP4.1□□□□□ -1.75
CD47-203ENST00000398258 SUSD5O60279 629 aa4.09□□□□□ -1.75
CD47-203ENST00000398258 C1SP09871 688 aa4.09□□□□□ -1.75
CD47-203ENST00000398258 ITGA4P13612 1032 aa4.09□□□□□ -1.75
CD47-203ENST00000398258 KRTAP10-6P60371 365 aaPredicted RBP4.09□□□□□ -1.75
CD47-203ENST00000398258 IFRD2Q12894 506 aaPredicted RBP4.09□□□□□ -1.75
CD47-203ENST00000398258 PRKD1Q15139 912 aaPredicted RBP4.09□□□□□ -1.75
CD47-203ENST00000398258 TCEAL1Q15170 157 aa4.09□□□□□ -1.75
CD47-203ENST00000398258 DPY19L1Q2PZI1 675 aa4.09□□□□□ -1.75
CD47-203ENST00000398258 SLC10A6Q3KNW5 377 aa4.09□□□□□ -1.75
CD47-203ENST00000398258 LSM12Q3MHD2 195 aaKnown RBP4.09□□□□□ -1.75
CD47-203ENST00000398258 C2orf27AQ580R0 203 aa4.09□□□□□ -1.75
CD47-203ENST00000398258 ZC3H12BQ5HYM0 836 aaKnown RBP4.09□□□□□ -1.75
CD47-203ENST00000398258 Q6ZSN1 163 aa4.09□□□□□ -1.75
CD47-203ENST00000398258 ADAT2Q7Z6V5 191 aaKnown RBP4.09□□□□□ -1.75
CD47-203ENST00000398258 SCUBE1Q8IWY4 988 aa4.09□□□□□ -1.75
CD47-203ENST00000398258 THAP3Q8WTV1 239 aaPredicted RBP4.09□□□□□ -1.75
CD47-203ENST00000398258 NEU4Q8WWR8 484 aaPredicted RBP4.09□□□□□ -1.75
CD47-203ENST00000398258 KLHL25Q9H0H3 589 aa4.09□□□□□ -1.75
CD47-203ENST00000398258 TMEM260Q9NX78 707 aa4.09□□□□□ -1.75
CD47-203ENST00000398258 A0A087WZG4 1122 aa4.08□□□□□ -1.76
CD47-203ENST00000398258 ANKRD34BA5PLL1 514 aa4.08□□□□□ -1.76
CD47-203ENST00000398258 ADCY3O60266 1144 aa4.08□□□□□ -1.76
CD47-203ENST00000398258 COL10A1Q03692 680 aa4.08□□□□□ -1.76
CD47-203ENST00000398258 SQSTM1Q13501 440 aa4.08□□□□□ -1.76
CD47-203ENST00000398258 MTERF2Q49AM1 385 aa4.08□□□□□ -1.76
CD47-203ENST00000398258 SPATC1Q76KD6 591 aa4.08□□□□□ -1.76
CD47-203ENST00000398258 ZNF627Q7L945 461 aa4.08□□□□□ -1.76
CD47-203ENST00000398258 KIAA0907Q7Z7F0 614 aaPredicted RBP4.08□□□□□ -1.76
CD47-203ENST00000398258 DCP2Q8IU60 420 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms