RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 ABCB6Q9NP58 842 aa20.32■□□□□ 0.84
CHRFAM7A-202ENST00000397827 KCNMB3Q9NPA1 279 aa20.32■□□□□ 0.84
CHRFAM7A-202ENST00000397827 LRRC53A6NM62 1247 aa20.31■□□□□ 0.84
CHRFAM7A-202ENST00000397827 OAS2P29728 719 aaKnown RBP20.31■□□□□ 0.84
CHRFAM7A-202ENST00000397827 IKQ13123 557 aaPredicted RBP20.31■□□□□ 0.84
CHRFAM7A-202ENST00000397827 STRIP1Q5VSL9 837 aa20.31■□□□□ 0.84
CHRFAM7A-202ENST00000397827 DCAF4Q8WV16 495 aa20.31■□□□□ 0.84
CHRFAM7A-202ENST00000397827 MMS19Q96T76 1030 aa20.31■□□□□ 0.84
CHRFAM7A-202ENST00000397827 UBXN6Q9BZV1 441 aa20.31■□□□□ 0.84
CHRFAM7A-202ENST00000397827 BMP2KQ9NSY1 1161 aaPredicted RBP20.31■□□□□ 0.84
CHRFAM7A-202ENST00000397827 MED24O75448 989 aa20.31■□□□□ 0.84
CHRFAM7A-202ENST00000397827 KIF5AQ12840 1032 aa20.31■□□□□ 0.84
CHRFAM7A-202ENST00000397827 SPA17Q15506 151 aa20.31■□□□□ 0.84
CHRFAM7A-202ENST00000397827 PRR16Q569H4 304 aa20.31■□□□□ 0.84
CHRFAM7A-202ENST00000397827 ZNF662Q6ZS27 426 aa20.31■□□□□ 0.84
CHRFAM7A-202ENST00000397827 GPBP1Q86WP2 473 aa20.31■□□□□ 0.84
CHRFAM7A-202ENST00000397827 ZHX3Q9H4I2 956 aa20.31■□□□□ 0.84
CHRFAM7A-202ENST00000397827 KDM3AQ9Y4C1 1321 aa20.31■□□□□ 0.84
CHRFAM7A-202ENST00000397827 POTEFA5A3E0 1075 aa20.3■□□□□ 0.84
CHRFAM7A-202ENST00000397827 POTEB2H3BUK9 544 aa20.3■□□□□ 0.84
CHRFAM7A-202ENST00000397827 CLGNO14967 610 aa20.3■□□□□ 0.84
CHRFAM7A-202ENST00000397827 APBA3O96018 575 aa20.3■□□□□ 0.84
CHRFAM7A-202ENST00000397827 POTEIP0CG38 1075 aa20.3■□□□□ 0.84
CHRFAM7A-202ENST00000397827 VAV2P52735 878 aa20.3■□□□□ 0.84
CHRFAM7A-202ENST00000397827 JAG1P78504 1218 aa20.3■□□□□ 0.84
CHRFAM7A-202ENST00000397827 CDK17Q00537 523 aa20.3■□□□□ 0.84
CHRFAM7A-202ENST00000397827 ZCWPW2Q504Y3 356 aa20.3■□□□□ 0.84
CHRFAM7A-202ENST00000397827 HYIQ5T013 277 aa20.3■□□□□ 0.84
CHRFAM7A-202ENST00000397827 POTEGQ6S5H5 508 aa20.3■□□□□ 0.84
CHRFAM7A-202ENST00000397827 POTEEQ6S8J3 1075 aa20.3■□□□□ 0.84
CHRFAM7A-202ENST00000397827 CCDC84Q86UT8 332 aaPredicted RBP20.3■□□□□ 0.84
CHRFAM7A-202ENST00000397827 IDI2Q9BXS1 227 aa20.3■□□□□ 0.84
CHRFAM7A-202ENST00000397827 TDRD3Q9H7E2 651 aaKnown RBP20.3■□□□□ 0.84
CHRFAM7A-202ENST00000397827 ZNF185O15231 689 aa20.3■□□□□ 0.84
CHRFAM7A-202ENST00000397827 EIF4A3P38919 411 aaKnown RBP20.3■□□□□ 0.84
CHRFAM7A-202ENST00000397827 USP11P51784 963 aa20.3■□□□□ 0.84
CHRFAM7A-202ENST00000397827 HERC4Q5GLZ8 1057 aaPredicted RBP20.3■□□□□ 0.84
CHRFAM7A-202ENST00000397827 PAPD7Q5XG87 772 aaKnown RBP20.3■□□□□ 0.84
CHRFAM7A-202ENST00000397827 EHBP1Q8NDI1 1231 aa20.3■□□□□ 0.84
CHRFAM7A-202ENST00000397827 HNRNPH3P31942 346 aaKnown RBP20.29■□□□□ 0.84
CHRFAM7A-202ENST00000397827 KIF11P52732 1056 aa20.29■□□□□ 0.84
CHRFAM7A-202ENST00000397827 ARHGAP4P98171 946 aa20.29■□□□□ 0.84
CHRFAM7A-202ENST00000397827 FKBP3Q00688 224 aaKnown RBP20.29■□□□□ 0.84
CHRFAM7A-202ENST00000397827 CCDC40Q4G0X9 1142 aa20.29■□□□□ 0.84
CHRFAM7A-202ENST00000397827 TATDN1Q6P1N9 297 aa20.29■□□□□ 0.84
CHRFAM7A-202ENST00000397827 HNRNPLLQ8WVV9 542 aaKnown RBP20.29■□□□□ 0.84
CHRFAM7A-202ENST00000397827 IFIH1Q9BYX4 1025 aaKnown RBP20.29■□□□□ 0.84
CHRFAM7A-202ENST00000397827 DEF6Q9H4E7 631 aa20.29■□□□□ 0.84
CHRFAM7A-202ENST00000397827 COL4A3BPQ9Y5P4 624 aa20.29■□□□□ 0.84
CHRFAM7A-202ENST00000397827 KCNMA1Q12791 1236 aa20.29■□□□□ 0.84
CHRFAM7A-202ENST00000397827 ABCB5Q2M3G0 1257 aa20.29■□□□□ 0.84
CHRFAM7A-202ENST00000397827 ABCB11O95342 1321 aa20.29■□□□□ 0.84
CHRFAM7A-202ENST00000397827 MEIS1O00470 390 aa20.29■□□□□ 0.84
CHRFAM7A-202ENST00000397827 NDUFB10O96000 172 aa20.29■□□□□ 0.84
CHRFAM7A-202ENST00000397827 CYP11B2P19099 503 aa20.29■□□□□ 0.84
CHRFAM7A-202ENST00000397827 AOC3Q16853 763 aa20.29■□□□□ 0.84
CHRFAM7A-202ENST00000397827 BAP1Q92560 729 aa20.29■□□□□ 0.84
CHRFAM7A-202ENST00000397827 NLRC4Q9NPP4 1024 aa20.29■□□□□ 0.84
CHRFAM7A-202ENST00000397827 PCDHA2Q9Y5H9 948 aa20.29■□□□□ 0.84
CHRFAM7A-202ENST00000397827 PCDHA13Q9Y5I0 950 aa20.29■□□□□ 0.84
CHRFAM7A-202ENST00000397827 MAP2K7O14733 419 aa20.28■□□□□ 0.84
CHRFAM7A-202ENST00000397827 CHRNA5P30532 468 aa20.28■□□□□ 0.84
CHRFAM7A-202ENST00000397827 PSMC6P62333 389 aa20.28■□□□□ 0.84
CHRFAM7A-202ENST00000397827 TUBB4BP68371 445 aa20.28■□□□□ 0.84
CHRFAM7A-202ENST00000397827 TMEM179Q6ZVK1 233 aa20.28■□□□□ 0.84
CHRFAM7A-202ENST00000397827 CACNA2D4Q7Z3S7 1137 aa20.28■□□□□ 0.84
CHRFAM7A-202ENST00000397827 CCDC65Q8IXS2 484 aa20.28■□□□□ 0.84
CHRFAM7A-202ENST00000397827 PURBQ96QR8 312 aaKnown RBP20.28■□□□□ 0.84
CHRFAM7A-202ENST00000397827 MYCBPQ99417 103 aaPredicted RBP20.28■□□□□ 0.84
CHRFAM7A-202ENST00000397827 NAP1L4Q99733 375 aaKnown RBP20.28■□□□□ 0.84
CHRFAM7A-202ENST00000397827 AMNQ9BXJ7 453 aa20.28■□□□□ 0.84
CHRFAM7A-202ENST00000397827 GLT8D2Q9H1C3 349 aa20.28■□□□□ 0.84
CHRFAM7A-202ENST00000397827 MLXIPQ9HAP2 919 aa20.28■□□□□ 0.84
CHRFAM7A-202ENST00000397827 JADE2Q9NQC1 790 aa20.28■□□□□ 0.84
CHRFAM7A-202ENST00000397827 AKR1B10O60218 316 aa20.28■□□□□ 0.84
CHRFAM7A-202ENST00000397827 KRT18P05783 430 aaKnown RBP20.28■□□□□ 0.84
CHRFAM7A-202ENST00000397827 APBA1Q02410 837 aa20.28■□□□□ 0.84
CHRFAM7A-202ENST00000397827 ARSHQ5FYA8 562 aa20.28■□□□□ 0.84
CHRFAM7A-202ENST00000397827 CATSPER3Q86XQ3 398 aa20.28■□□□□ 0.84
CHRFAM7A-202ENST00000397827 SPICE1Q8N0Z3 855 aa20.28■□□□□ 0.84
CHRFAM7A-202ENST00000397827 SCFD1Q8WVM8 642 aa20.28■□□□□ 0.84
CHRFAM7A-202ENST00000397827 DRC1Q96MC2 740 aa20.28■□□□□ 0.84
CHRFAM7A-202ENST00000397827 CRACR2AQ9BSW2 395 aa20.28■□□□□ 0.84
CHRFAM7A-202ENST00000397827 CAPN6Q9Y6Q1 641 aa20.28■□□□□ 0.84
CHRFAM7A-202ENST00000397827 CYP3A7-CYP3A51PA0A087WV96 503 aa20.27■□□□□ 0.84
CHRFAM7A-202ENST00000397827 GH2P01242 217 aa20.27■□□□□ 0.84
CHRFAM7A-202ENST00000397827 CYP3A7P24462 503 aa20.27■□□□□ 0.84
CHRFAM7A-202ENST00000397827 HOXA13P31271 388 aaPredicted RBP20.27■□□□□ 0.84
CHRFAM7A-202ENST00000397827 RRP1BQ14684 758 aaKnown RBP20.27■□□□□ 0.84
CHRFAM7A-202ENST00000397827 ZSCAN26Q16670 478 aa20.27■□□□□ 0.84
CHRFAM7A-202ENST00000397827 IQCDQ96DY2 449 aa20.27■□□□□ 0.84
CHRFAM7A-202ENST00000397827 L1RE1Q9UN81 338 aa20.27■□□□□ 0.84
CHRFAM7A-202ENST00000397827 FAM86B1E9PN63 330 aa20.27■□□□□ 0.83
CHRFAM7A-202ENST00000397827 H3BQF6 201 aa20.27■□□□□ 0.83
CHRFAM7A-202ENST00000397827 ERLIN1O75477 346 aa20.27■□□□□ 0.83
CHRFAM7A-202ENST00000397827 FAM86B2P0C5J1 330 aa20.27■□□□□ 0.83
CHRFAM7A-202ENST00000397827 SPIRE1Q08AE8 756 aa20.27■□□□□ 0.83
CHRFAM7A-202ENST00000397827 FBXO11Q86XK2 927 aa20.27■□□□□ 0.83
CHRFAM7A-202ENST00000397827 ETNPPLQ8TBG4 499 aa20.27■□□□□ 0.83
CHRFAM7A-202ENST00000397827 CRYGNQ8WXF5 182 aa20.27■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms