RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 UBXN2AP68543 259 aa21.35■■□□□ 1.01
TSPAN4-204ENST00000397404 MDM2Q00987 491 aaPredicted RBP21.35■■□□□ 1.01
TSPAN4-204ENST00000397404 PDE4DQ08499 809 aa21.35■■□□□ 1.01
TSPAN4-204ENST00000397404 KARSQ15046 597 aaKnown RBP21.35■■□□□ 1.01
TSPAN4-204ENST00000397404 STX1AQ16623 288 aa21.35■■□□□ 1.01
TSPAN4-204ENST00000397404 PDXDC2PQ6P474 469 aa21.35■■□□□ 1.01
TSPAN4-204ENST00000397404 B3GNT9Q6UX72 402 aa21.35■■□□□ 1.01
TSPAN4-204ENST00000397404 ZNF784Q8NCA9 323 aaPredicted RBP21.35■■□□□ 1.01
TSPAN4-204ENST00000397404 IL31RAQ8NI17 732 aa21.35■■□□□ 1.01
TSPAN4-204ENST00000397404 SPATA20Q8TB22 786 aa21.35■■□□□ 1.01
TSPAN4-204ENST00000397404 FUCA2Q9BTY2 467 aa21.35■■□□□ 1.01
TSPAN4-204ENST00000397404 MMTAG2Q9BU76 263 aaKnown RBP21.35■■□□□ 1.01
TSPAN4-204ENST00000397404 NAT10Q9H0A0 1025 aaKnown RBP21.35■■□□□ 1.01
TSPAN4-204ENST00000397404 KBTBD4Q9NVX7 518 aa21.35■■□□□ 1.01
TSPAN4-204ENST00000397404 RMND1Q9NWS8 449 aa21.35■■□□□ 1.01
TSPAN4-204ENST00000397404 ZNF236Q9UL36 1845 aa21.35■■□□□ 1.01
TSPAN4-204ENST00000397404 EPHA7Q15375 998 aa21.34■■□□□ 1.01
TSPAN4-204ENST00000397404 TMEM119Q4V9L6 283 aa21.34■■□□□ 1.01
TSPAN4-204ENST00000397404 SMAP1Q8IYB5 467 aaPredicted RBP21.34■■□□□ 1.01
TSPAN4-204ENST00000397404 SLC15A5A6NIM6 579 aa21.33■■□□□ 1.01
TSPAN4-204ENST00000397404 GTPBP6O43824 516 aaPredicted RBP21.33■■□□□ 1.01
TSPAN4-204ENST00000397404 DKC1O60832 514 aaKnown RBP eCLIP21.33■■□□□ 1.01
TSPAN4-204ENST00000397404 ARP10275 920 aa21.33■■□□□ 1.01
TSPAN4-204ENST00000397404 PLCG1P19174 1290 aa21.33■■□□□ 1.01
TSPAN4-204ENST00000397404 CCT6AP40227 531 aaKnown RBP21.33■■□□□ 1.01
TSPAN4-204ENST00000397404 TYRO3Q06418 890 aa21.33■■□□□ 1.01
TSPAN4-204ENST00000397404 DEFB115Q30KQ5 88 aa21.33■■□□□ 1.01
TSPAN4-204ENST00000397404 L1TD1Q5T7N2 865 aaKnown RBP21.33■■□□□ 1.01
TSPAN4-204ENST00000397404 ZNF746Q6NUN9 644 aaPredicted RBP21.33■■□□□ 1.01
TSPAN4-204ENST00000397404 PLEKHH3Q7Z736 793 aa21.33■■□□□ 1.01
TSPAN4-204ENST00000397404 CKAP2LQ8IYA6 745 aa21.33■■□□□ 1.01
TSPAN4-204ENST00000397404 SMARCE1Q969G3 411 aa21.33■■□□□ 1.01
TSPAN4-204ENST00000397404 CCDC47Q96A33 483 aaKnown RBP21.33■■□□□ 1.01
TSPAN4-204ENST00000397404 PAGE5Q96GU1 130 aa21.33■■□□□ 1.01
TSPAN4-204ENST00000397404 A0A087X0B3 334 aa21.32■■□□□ 1
TSPAN4-204ENST00000397404 FSD2A1L4K1 749 aa21.32■■□□□ 1
TSPAN4-204ENST00000397404 SPATA31C2B4DYI2 1134 aa21.32■■□□□ 1
TSPAN4-204ENST00000397404 CA12O43570 354 aa21.32■■□□□ 1
TSPAN4-204ENST00000397404 GRB14Q14449 540 aa21.32■■□□□ 1
TSPAN4-204ENST00000397404 WDR78Q5VTH9 848 aa21.32■■□□□ 1
TSPAN4-204ENST00000397404 CNNM4Q6P4Q7 775 aa21.32■■□□□ 1
TSPAN4-204ENST00000397404 C17orf99Q6UX52 265 aa21.32■■□□□ 1
TSPAN4-204ENST00000397404 SV2BQ7L1I2 683 aa21.32■■□□□ 1
TSPAN4-204ENST00000397404 LARP4BQ92615 738 aaKnown RBP21.32■■□□□ 1
TSPAN4-204ENST00000397404 PORCNQ9H237 461 aa21.32■■□□□ 1
TSPAN4-204ENST00000397404 DACH1Q9UI36 760 aa21.32■■□□□ 1
TSPAN4-204ENST00000397404 LCTP09848 1927 aa21.32■■□□□ 1
TSPAN4-204ENST00000397404 CDC25AP30304 524 aa21.32■■□□□ 1
TSPAN4-204ENST00000397404 CNTN2Q02246 1040 aa21.32■■□□□ 1
TSPAN4-204ENST00000397404 NCAPH2Q6IBW4 605 aa21.32■■□□□ 1
TSPAN4-204ENST00000397404 GPR142Q7Z601 462 aa21.32■■□□□ 1
TSPAN4-204ENST00000397404 PANK2Q9BZ23 570 aa21.32■■□□□ 1
TSPAN4-204ENST00000397404 EFCC1Q9HA90 598 aa21.32■■□□□ 1
TSPAN4-204ENST00000397404 BMP2KQ9NSY1 1161 aaPredicted RBP21.32■■□□□ 1
TSPAN4-204ENST00000397404 SOWAHBA6NEL2 793 aa21.31■■□□□ 1
TSPAN4-204ENST00000397404 PP2D1A8MPX8 630 aa21.31■■□□□ 1
TSPAN4-204ENST00000397404 WDR64B1ANS9 1081 aa21.31■■□□□ 1
TSPAN4-204ENST00000397404 DHX15O43143 795 aaKnown RBP21.31■■□□□ 1
TSPAN4-204ENST00000397404 SARSP49591 514 aaKnown RBP21.31■■□□□ 1
TSPAN4-204ENST00000397404 MRE11P49959 708 aa21.31■■□□□ 1
TSPAN4-204ENST00000397404 GRB10Q13322 594 aa21.31■■□□□ 1
TSPAN4-204ENST00000397404 NEDD9Q14511 834 aa21.31■■□□□ 1
TSPAN4-204ENST00000397404 NAALADL2Q58DX5 795 aa21.31■■□□□ 1
TSPAN4-204ENST00000397404 HSD17B14Q9BPX1 270 aa21.31■■□□□ 1
TSPAN4-204ENST00000397404 CFHR5Q9BXR6 569 aa21.31■■□□□ 1
TSPAN4-204ENST00000397404 DNM3Q9UQ16 869 aa21.31■■□□□ 1
TSPAN4-204ENST00000397404 P4HBP07237 508 aaKnown RBP21.3■■□□□ 1
TSPAN4-204ENST00000397404 ADORA2AP29274 412 aa21.3■■□□□ 1
TSPAN4-204ENST00000397404 ZNF792Q3KQV3 632 aa21.3■■□□□ 1
TSPAN4-204ENST00000397404 RAD54LQ92698 747 aa21.3■■□□□ 1
TSPAN4-204ENST00000397404 C7orf25Q9BPX7 421 aa21.3■■□□□ 1
TSPAN4-204ENST00000397404 EIF2AK1Q9BQI3 630 aaKnown RBP21.3■■□□□ 1
TSPAN4-204ENST00000397404 KCND2Q9NZV8 630 aa21.3■■□□□ 1
TSPAN4-204ENST00000397404 LOXHD1Q8IVV2 1947 aa21.3■■□□□ 1
TSPAN4-204ENST00000397404 PLXNB2O15031 1838 aa21.29■■□□□ 1
TSPAN4-204ENST00000397404 XRCC6P12956 609 aaKnown RBP eCLIP21.29■■□□□ 1
TSPAN4-204ENST00000397404 MAP2K2P36507 400 aa21.29■■□□□ 1
TSPAN4-204ENST00000397404 PPP1R2P41236 205 aa21.29■■□□□ 1
TSPAN4-204ENST00000397404 NLRP12P59046 1061 aa21.29■■□□□ 1
TSPAN4-204ENST00000397404 DPYDQ12882 1025 aa21.29■■□□□ 1
TSPAN4-204ENST00000397404 PNOCQ13519 176 aa21.29■■□□□ 1
TSPAN4-204ENST00000397404 KCNB1Q14721 858 aa21.29■■□□□ 1
TSPAN4-204ENST00000397404 MAMDC4Q6UXC1 1216 aa21.29■■□□□ 1
TSPAN4-204ENST00000397404 PAXIP1Q6ZW49 1069 aaPredicted RBP21.29■■□□□ 1
TSPAN4-204ENST00000397404 MIER3Q7Z3K6 550 aa21.29■■□□□ 1
TSPAN4-204ENST00000397404 SOCS4Q8WXH5 440 aa21.29■■□□□ 1
TSPAN4-204ENST00000397404 PNMA5Q96PV4 448 aa21.29■■□□□ 1
TSPAN4-204ENST00000397404 BPIFA3Q9BQP9 254 aa21.29■■□□□ 1
TSPAN4-204ENST00000397404 PCDHA5Q9Y5H7 936 aa21.29■■□□□ 1
TSPAN4-204ENST00000397404 ZNFX1Q9P2E3 1918 aaKnown RBP21.29■■□□□ 1
TSPAN4-204ENST00000397404 SYNGAP1Q96PV0 1343 aa21.29■■□□□ 1
TSPAN4-204ENST00000397404 LYPLA2O95372 231 aa21.28■■□□□ 1
TSPAN4-204ENST00000397404 KCNA2P16389 499 aa21.28■■□□□ 1
TSPAN4-204ENST00000397404 ITGB3BPQ13352 177 aaPredicted RBP21.28■■□□□ 1
TSPAN4-204ENST00000397404 UVSSAQ2YD98 709 aa21.28■■□□□ 1
TSPAN4-204ENST00000397404 DPP9Q86TI2 863 aa21.28■■□□□ 1
TSPAN4-204ENST00000397404 CATSPER3Q86XQ3 398 aa21.28■■□□□ 1
TSPAN4-204ENST00000397404 MLKLQ8NB16 471 aa21.28■■□□□ 1
TSPAN4-204ENST00000397404 FAM200AQ8TCP9 573 aa21.28■■□□□ 1
TSPAN4-204ENST00000397404 NACC1Q96RE7 527 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms