RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 OAZ1P54368 228 aa15.04■□□□□ -0
SEC13-209ENST00000397117 NONOQ15233 471 aaKnown RBP eCLIP15.04■□□□□ -0
SEC13-209ENST00000397117 SF3A1Q15459 793 aaKnown RBP15.04■□□□□ -0
SEC13-209ENST00000397117 UBE2SQ16763 222 aa15.04■□□□□ -0
SEC13-209ENST00000397117 CCDC144BQ3MJ40 725 aa15.04■□□□□ -0
SEC13-209ENST00000397117 EARS2Q5JPH6 523 aaKnown RBP15.04■□□□□ -0
SEC13-209ENST00000397117 MCTP2Q6DN12 878 aa15.04■□□□□ -0
SEC13-209ENST00000397117 TEX2Q8IWB9 1127 aa15.04■□□□□ -0
SEC13-209ENST00000397117 KCNG4Q8TDN1 519 aa15.04■□□□□ -0
SEC13-209ENST00000397117 PBX4Q9BYU1 374 aa15.04■□□□□ -0
SEC13-209ENST00000397117 KATNBL1Q9H079 304 aa15.04■□□□□ -0
SEC13-209ENST00000397117 LMBRD1Q9NUN5 540 aa15.04■□□□□ -0
SEC13-209ENST00000397117 CEP131Q9UPN4 1083 aa15.04■□□□□ -0
SEC13-209ENST00000397117 ZNF536O15090 1300 aa15.04■□□□□ -0
SEC13-209ENST00000397117 GBF1Q92538 1859 aa15.04■□□□□ -0
SEC13-209ENST00000397117 A0A0U1RQG5 324 aaPredicted RBP15.03■□□□□ -0
SEC13-209ENST00000397117 YEATS4O95619 227 aa15.03■□□□□ -0
SEC13-209ENST00000397117 ALAS1P13196 640 aa15.03■□□□□ -0
SEC13-209ENST00000397117 NASPP49321 788 aaPredicted RBP15.03■□□□□ -0
SEC13-209ENST00000397117 TOB1P50616 345 aaPredicted RBP15.03■□□□□ -0
SEC13-209ENST00000397117 ZNF365Q70YC5 407 aa15.03■□□□□ -0
SEC13-209ENST00000397117 FAM126BQ8IXS8 530 aa15.03■□□□□ -0
SEC13-209ENST00000397117 TMEM260Q9NX78 707 aa15.03■□□□□ -0
SEC13-209ENST00000397117 RCOR1Q9UKL0 485 aa15.03■□□□□ -0
SEC13-209ENST00000397117 CHD9Q3L8U1 2897 aa15.03■□□□□ -0
SEC13-209ENST00000397117 CD4P01730 458 aa15.03■□□□□ -0
SEC13-209ENST00000397117 INF2Q27J81 1249 aa15.03■□□□□ -0
SEC13-209ENST00000397117 GNASQ5JWF2 1037 aa15.03■□□□□ -0
SEC13-209ENST00000397117 TTC38Q5R3I4 469 aa15.03■□□□□ -0
SEC13-209ENST00000397117 USP17L6PQ6QN14 398 aa15.03■□□□□ -0
SEC13-209ENST00000397117 TMEM199Q8N511 208 aa15.03■□□□□ -0
SEC13-209ENST00000397117 LINC00301Q8NCQ3 95 aa15.03■□□□□ -0
SEC13-209ENST00000397117 CHST13Q8NET6 341 aa15.03■□□□□ -0
SEC13-209ENST00000397117 VTI1AQ96AJ9 217 aa15.03■□□□□ -0
SEC13-209ENST00000397117 SPC25Q9HBM1 224 aa15.03■□□□□ -0
SEC13-209ENST00000397117 MYH15Q9Y2K3 1946 aa15.02□□□□□ -0.01
SEC13-209ENST00000397117 SPDYE3A6NKU9 549 aa15.02□□□□□ -0.01
SEC13-209ENST00000397117 GCOM1H8Y6P7 765 aaPredicted RBP15.02□□□□□ -0.01
SEC13-209ENST00000397117 TNFRSF10AO00220 468 aa15.02□□□□□ -0.01
SEC13-209ENST00000397117 SPTLC2O15270 562 aa15.02□□□□□ -0.01
SEC13-209ENST00000397117 BMP15O95972 392 aa15.02□□□□□ -0.01
SEC13-209ENST00000397117 CFBP00751 764 aa15.02□□□□□ -0.01
SEC13-209ENST00000397117 POLR2MP0CAP2 368 aa15.02□□□□□ -0.01
SEC13-209ENST00000397117 ACRP10323 421 aa15.02□□□□□ -0.01
SEC13-209ENST00000397117 ME1P48163 572 aa15.02□□□□□ -0.01
SEC13-209ENST00000397117 CLK2P49760 499 aaKnown RBP15.02□□□□□ -0.01
SEC13-209ENST00000397117 AP3B2Q13367 1082 aa15.02□□□□□ -0.01
SEC13-209ENST00000397117 SLC39A14Q15043 492 aa15.02□□□□□ -0.01
SEC13-209ENST00000397117 SKOR2Q2VWA4 1001 aaPredicted RBP15.02□□□□□ -0.01
SEC13-209ENST00000397117 ARMCX2Q7L311 632 aa15.02□□□□□ -0.01
SEC13-209ENST00000397117 MCF2L2Q86YR7 1114 aa15.02□□□□□ -0.01
SEC13-209ENST00000397117 ANKRD35Q8N283 1001 aa15.02□□□□□ -0.01
SEC13-209ENST00000397117 SLC43A3Q8NBI5 491 aa15.02□□□□□ -0.01
SEC13-209ENST00000397117 HOMER2Q9NSB8 354 aa15.02□□□□□ -0.01
SEC13-209ENST00000397117 FBXO40Q9UH90 709 aa15.02□□□□□ -0.01
SEC13-209ENST00000397117 PCDHB6Q9Y5E3 794 aa15.02□□□□□ -0.01
SEC13-209ENST00000397117 TCHHQ07283 1943 aa15.01□□□□□ -0.01
SEC13-209ENST00000397117 PIK3CDO00329 1044 aa15.01□□□□□ -0.01
SEC13-209ENST00000397117 MEIS2O14770 477 aa15.01□□□□□ -0.01
SEC13-209ENST00000397117 FOSP01100 380 aaPredicted RBP15.01□□□□□ -0.01
SEC13-209ENST00000397117 UBE2HP62256 183 aa15.01□□□□□ -0.01
SEC13-209ENST00000397117 ZNF174Q15697 407 aa15.01□□□□□ -0.01
SEC13-209ENST00000397117 TPRNQ4KMQ1 711 aa15.01□□□□□ -0.01
SEC13-209ENST00000397117 PSRC1Q6PGN9 363 aaPredicted RBP15.01□□□□□ -0.01
SEC13-209ENST00000397117 TBCKQ8TEA7 893 aa15.01□□□□□ -0.01
SEC13-209ENST00000397117 ATXN2LQ8WWM7 1075 aaKnown RBP15.01□□□□□ -0.01
SEC13-209ENST00000397117 HERVK_113Q902F9 699 aa15.01□□□□□ -0.01
SEC13-209ENST00000397117 PGBD1Q96JS3 809 aa15.01□□□□□ -0.01
SEC13-209ENST00000397117 TRERF1Q96PN7 1200 aa15.01□□□□□ -0.01
SEC13-209ENST00000397117 GAS2L1Q99501 681 aaPredicted RBP15.01□□□□□ -0.01
SEC13-209ENST00000397117 PPP1R12CQ9BZL4 782 aa15.01□□□□□ -0.01
SEC13-209ENST00000397117 PRDM12Q9H4Q4 367 aa15.01□□□□□ -0.01
SEC13-209ENST00000397117 ASTN1O14525 1302 aa15□□□□□ -0.01
SEC13-209ENST00000397117 OPLAHO14841 1288 aa15□□□□□ -0.01
SEC13-209ENST00000397117 TLR3O15455 904 aaKnown RBP15□□□□□ -0.01
SEC13-209ENST00000397117 HOXA13P31271 388 aaPredicted RBP15□□□□□ -0.01
SEC13-209ENST00000397117 CYP2C18P33260 490 aa15□□□□□ -0.01
SEC13-209ENST00000397117 CNTN2Q02246 1040 aa15□□□□□ -0.01
SEC13-209ENST00000397117 ADGRE1Q14246 886 aa15□□□□□ -0.01
SEC13-209ENST00000397117 TKFCQ3LXA3 575 aa15□□□□□ -0.01
SEC13-209ENST00000397117 NEK8Q86SG6 692 aa15□□□□□ -0.01
SEC13-209ENST00000397117 FAM133AQ8N9E0 248 aa15□□□□□ -0.01
SEC13-209ENST00000397117 IL23AQ9NPF7 189 aa15□□□□□ -0.01
SEC13-209ENST00000397117 EIF4ENIF1Q9NRA8 985 aaKnown RBP15□□□□□ -0.01
SEC13-209ENST00000397117 DDX49Q9Y6V7 483 aaKnown RBP15□□□□□ -0.01
SEC13-209ENST00000397117 BDP1A6H8Y1 2624 aa15□□□□□ -0.01
SEC13-209ENST00000397117 TRAK2O60296 914 aa14.99□□□□□ -0.01
SEC13-209ENST00000397117 GADD45BO75293 160 aaPredicted RBP14.99□□□□□ -0.01
SEC13-209ENST00000397117 MBD3O95983 291 aa14.99□□□□□ -0.01
SEC13-209ENST00000397117 MCM7P33993 719 aa14.99□□□□□ -0.01
SEC13-209ENST00000397117 BEX3Q00994 111 aa14.99□□□□□ -0.01
SEC13-209ENST00000397117 LETM2Q2VYF4 491 aa14.99□□□□□ -0.01
SEC13-209ENST00000397117 PPM1EQ8WY54 764 aa14.99□□□□□ -0.01
SEC13-209ENST00000397117 ANO3Q9BYT9 981 aa14.99□□□□□ -0.01
SEC13-209ENST00000397117 EHMT1Q9H9B1 1298 aa14.99□□□□□ -0.01
SEC13-209ENST00000397117 RNF146Q9NTX7 359 aa14.99□□□□□ -0.01
SEC13-209ENST00000397117 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.99□□□□□ -0.01
SEC13-209ENST00000397117 SOWAHBA6NEL2 793 aa14.99□□□□□ -0.01
SEC13-209ENST00000397117 NFIBO00712 420 aa14.99□□□□□ -0.01
SEC13-209ENST00000397117 CCNT1O60563 726 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms