RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 ATICP31939 592 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 IL6STP40189 918 aaPredicted RBP7.77□□□□□ -1.17
UPF2-203ENST00000397053 MXI1P50539 228 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 ADKP55263 362 aaKnown RBP7.77□□□□□ -1.17
UPF2-203ENST00000397053 ZNF667Q5HYK9 610 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 THEMIS2Q5TEJ8 643 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 SCARA5Q6ZMJ2 495 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 BZW1Q7L1Q6 419 aaKnown RBP7.77□□□□□ -1.17
UPF2-203ENST00000397053 TRIM42Q8IWZ5 723 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 KCTD6Q8NC69 237 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 LARP4BQ92615 738 aaKnown RBP7.77□□□□□ -1.17
UPF2-203ENST00000397053 EXT2Q93063 718 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 SRPK1Q96SB4 655 aaKnown RBP7.77□□□□□ -1.17
UPF2-203ENST00000397053 SUN2Q9UH99 717 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.77□□□□□ -1.17
UPF2-203ENST00000397053 ZFYVE9O95405 1425 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 ERBB4Q15303 1308 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 POLR3AO14802 1390 aaPredicted RBP7.77□□□□□ -1.17
UPF2-203ENST00000397053 PNMA6EA0A0J9YXQ4 647 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 IQCA1LA6NCM1 817 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 HUS1O60921 280 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 TMCC1O94876 653 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 ZBTB7AO95365 584 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 LONP1P36776 959 aaKnown RBP7.77□□□□□ -1.17
UPF2-203ENST00000397053 PHKA1P46020 1223 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 PAPOLAP51003 745 aaKnown RBP7.77□□□□□ -1.17
UPF2-203ENST00000397053 ADCY1Q08828 1119 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 RCN2Q14257 317 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 SYDE2Q5VT97 1194 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 CYP4F22Q6NT55 531 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 FOXP4Q8IVH2 680 aaPredicted RBP7.77□□□□□ -1.17
UPF2-203ENST00000397053 ULK4Q96C45 1275 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 ZNF274Q96GC6 653 aaPredicted RBP7.77□□□□□ -1.17
UPF2-203ENST00000397053 SPON2Q9BUD6 331 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 NEUROG2Q9H2A3 272 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 TRIM45Q9H8W5 580 aaPredicted RBP7.77□□□□□ -1.17
UPF2-203ENST00000397053 CBX8Q9HC52 389 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 HACD3Q9P035 362 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 ABCC1P33527 1531 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 TNPO2O14787 897 aaKnown RBP7.77□□□□□ -1.17
UPF2-203ENST00000397053 ZBTB7BO15156 539 aaPredicted RBP7.77□□□□□ -1.17
UPF2-203ENST00000397053 DTNBO60941 627 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 IGSF3O75054 1194 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 ZBED1O96006 694 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 KCNQ4P56696 695 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 LLGL1Q15334 1064 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 DCAF4L1Q3SXM0 396 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 LCA5Q86VQ0 697 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 GREM2Q9H772 168 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 HOXC10Q9NYD6 342 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 ZBTB1Q9Y2K1 713 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 ZHX2Q9Y6X8 837 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 EIF4G3O43432 1585 aaKnown RBP7.77□□□□□ -1.17
UPF2-203ENST00000397053 IQGAP2Q13576 1575 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 PFKFB1P16118 471 aa7.76□□□□□ -1.17
UPF2-203ENST00000397053 EHHADHQ08426 723 aa7.76□□□□□ -1.17
UPF2-203ENST00000397053 MXD4Q14582 209 aaPredicted RBP7.76□□□□□ -1.17
UPF2-203ENST00000397053 KIAA1755Q5JYT7 1200 aa7.76□□□□□ -1.17
UPF2-203ENST00000397053 RNF207Q6ZRF8 634 aa7.76□□□□□ -1.17
UPF2-203ENST00000397053 FRA10AC1Q70Z53 315 aa7.76□□□□□ -1.17
UPF2-203ENST00000397053 GIPC2Q8TF65 315 aa7.76□□□□□ -1.17
UPF2-203ENST00000397053 TCP11Q8WWU5 503 aa7.76□□□□□ -1.17
UPF2-203ENST00000397053 G3BP2Q9UN86 482 aaKnown RBP7.76□□□□□ -1.17
UPF2-203ENST00000397053 PTPN22Q9Y2R2 807 aa7.76□□□□□ -1.17
UPF2-203ENST00000397053 BLMP54132 1417 aaPredicted RBP7.76□□□□□ -1.17
UPF2-203ENST00000397053 RPN1P04843 607 aaKnown RBP7.76□□□□□ -1.17
UPF2-203ENST00000397053 ZNF75DP51815 510 aa7.76□□□□□ -1.17
UPF2-203ENST00000397053 SNX1Q13596 522 aa7.76□□□□□ -1.17
UPF2-203ENST00000397053 ZNF827Q17R98 1081 aa7.76□□□□□ -1.17
UPF2-203ENST00000397053 ACAP3Q96P50 834 aa7.76□□□□□ -1.17
UPF2-203ENST00000397053 MSTO1Q9BUK6 570 aa7.76□□□□□ -1.17
UPF2-203ENST00000397053 RASSF4Q9H2L5 321 aa7.76□□□□□ -1.17
UPF2-203ENST00000397053 HAUS4Q9H6D7 363 aa7.76□□□□□ -1.17
UPF2-203ENST00000397053 DNAJC5BQ9UF47 199 aa7.76□□□□□ -1.17
UPF2-203ENST00000397053 ASAP1Q9ULH1 1129 aa7.76□□□□□ -1.17
UPF2-203ENST00000397053 SYNJ1O43426 1573 aa7.76□□□□□ -1.17
UPF2-203ENST00000397053 EFCAB8A8MWE9 144 aa7.76□□□□□ -1.17
UPF2-203ENST00000397053 TTI1O43156 1089 aa7.76□□□□□ -1.17
UPF2-203ENST00000397053 FGAP02671 866 aa7.76□□□□□ -1.17
UPF2-203ENST00000397053 CPB1P15086 417 aa7.76□□□□□ -1.17
UPF2-203ENST00000397053 MSH2P43246 934 aa7.76□□□□□ -1.17
UPF2-203ENST00000397053 ZC3H12BQ5HYM0 836 aaKnown RBP7.76□□□□□ -1.17
UPF2-203ENST00000397053 SLFN12LQ6IEE8 588 aa7.76□□□□□ -1.17
UPF2-203ENST00000397053 FAM167AQ96KS9 214 aa7.76□□□□□ -1.17
UPF2-203ENST00000397053 WRNIP1Q96S55 665 aa7.76□□□□□ -1.17
UPF2-203ENST00000397053 TEX12Q9BXU0 123 aa7.76□□□□□ -1.17
UPF2-203ENST00000397053 SESN3P58005 492 aa7.76□□□□□ -1.17
UPF2-203ENST00000397053 UBE3CQ15386 1083 aa7.76□□□□□ -1.17
UPF2-203ENST00000397053 AFG1LQ8WV93 481 aa7.76□□□□□ -1.17
UPF2-203ENST00000397053 MAGEF1Q9HAY2 307 aa7.76□□□□□ -1.17
UPF2-203ENST00000397053 A0A1W2PP64 1363 aa7.76□□□□□ -1.17
UPF2-203ENST00000397053 ZNF197O14709 1029 aa7.75□□□□□ -1.17
UPF2-203ENST00000397053 CLIC2O15247 247 aa7.75□□□□□ -1.17
UPF2-203ENST00000397053 HSPD1P10809 573 aaKnown RBP7.75□□□□□ -1.17
UPF2-203ENST00000397053 IL9RQ01113 521 aa7.75□□□□□ -1.17
UPF2-203ENST00000397053 SGO2Q562F6 1265 aa7.75□□□□□ -1.17
UPF2-203ENST00000397053 PPP6R3Q5H9R7 873 aaPredicted RBP7.75□□□□□ -1.17
UPF2-203ENST00000397053 DRC3Q9H069 523 aa7.75□□□□□ -1.17
UPF2-203ENST00000397053 DDIT3P35638 169 aa7.75□□□□□ -1.17
UPF2-203ENST00000397053 FKBP3Q00688 224 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms