RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 LRCH2Q5VUJ6 765 aa14.28□□□□□ -0.12
TRIM39-204ENST00000396548 LUZP1Q86V48 1076 aa14.28□□□□□ -0.12
TRIM39-204ENST00000396548 PAGR1Q9BTK6 254 aa14.28□□□□□ -0.12
TRIM39-204ENST00000396548 BLZF1Q9H2G9 400 aa14.28□□□□□ -0.12
TRIM39-204ENST00000396548 UNC45AQ9H3U1 944 aa14.28□□□□□ -0.12
TRIM39-204ENST00000396548 DOCK5Q9H7D0 1870 aa14.28□□□□□ -0.12
TRIM39-204ENST00000396548 ZNF236Q9UL36 1845 aa14.28□□□□□ -0.12
TRIM39-204ENST00000396548 FSTL1Q12841 308 aa14.28□□□□□ -0.12
TRIM39-204ENST00000396548 LOXHD1Q8IVV2 1947 aa14.28□□□□□ -0.12
TRIM39-204ENST00000396548 MARCH6O60337 910 aa14.27□□□□□ -0.12
TRIM39-204ENST00000396548 STAM2O75886 525 aa14.27□□□□□ -0.12
TRIM39-204ENST00000396548 SMC2O95347 1197 aa14.27□□□□□ -0.12
TRIM39-204ENST00000396548 MTMR1Q13613 665 aa14.27□□□□□ -0.12
TRIM39-204ENST00000396548 NCAPHQ15003 741 aa14.27□□□□□ -0.12
TRIM39-204ENST00000396548 ISM2Q6H9L7 571 aa14.27□□□□□ -0.12
TRIM39-204ENST00000396548 GPRASP2Q96D09 838 aa14.27□□□□□ -0.12
TRIM39-204ENST00000396548 TRIM9Q9C026 710 aa14.27□□□□□ -0.12
TRIM39-204ENST00000396548 TLL2Q9Y6L7 1015 aa14.27□□□□□ -0.12
TRIM39-204ENST00000396548 NCAPH2Q6IBW4 605 aa14.27□□□□□ -0.13
TRIM39-204ENST00000396548 NCAPG2Q86XI2 1143 aa14.27□□□□□ -0.13
TRIM39-204ENST00000396548 CCDC34Q96HJ3 373 aa14.27□□□□□ -0.13
TRIM39-204ENST00000396548 MED15Q96RN5 788 aa14.27□□□□□ -0.13
TRIM39-204ENST00000396548 EIF2AK1Q9BQI3 630 aaKnown RBP14.27□□□□□ -0.13
TRIM39-204ENST00000396548 NT5C3AQ9H0P0 336 aa14.27□□□□□ -0.13
TRIM39-204ENST00000396548 HSD3B7Q9H2F3 369 aa14.27□□□□□ -0.13
TRIM39-204ENST00000396548 MROH8Q9H579 483 aa14.27□□□□□ -0.13
TRIM39-204ENST00000396548 POTEB3A0JP26 581 aa14.26□□□□□ -0.13
TRIM39-204ENST00000396548 ATP9AO75110 1047 aa14.26□□□□□ -0.13
TRIM39-204ENST00000396548 CCT6AP40227 531 aaKnown RBP14.26□□□□□ -0.13
TRIM39-204ENST00000396548 ALDH5A1P51649 535 aaPredicted RBP14.26□□□□□ -0.13
TRIM39-204ENST00000396548 KCNB1Q14721 858 aa14.26□□□□□ -0.13
TRIM39-204ENST00000396548 POTEBQ6S5H4 581 aa14.26□□□□□ -0.13
TRIM39-204ENST00000396548 KCTD17Q8N5Z5 321 aa14.26□□□□□ -0.13
TRIM39-204ENST00000396548 LARP4BQ92615 738 aaKnown RBP14.26□□□□□ -0.13
TRIM39-204ENST00000396548 SLITRK3O94933 977 aa14.26□□□□□ -0.13
TRIM39-204ENST00000396548 RPN1P04843 607 aaKnown RBP14.26□□□□□ -0.13
TRIM39-204ENST00000396548 SLC10A3P09131 477 aa14.26□□□□□ -0.13
TRIM39-204ENST00000396548 MCM6Q14566 821 aa14.26□□□□□ -0.13
TRIM39-204ENST00000396548 ANKRD35Q8N283 1001 aa14.26□□□□□ -0.13
TRIM39-204ENST00000396548 PORCNQ9H237 461 aa14.26□□□□□ -0.13
TRIM39-204ENST00000396548 MAFGO15525 162 aa14.26□□□□□ -0.13
TRIM39-204ENST00000396548 MYCLP12524 364 aaPredicted RBP14.26□□□□□ -0.13
TRIM39-204ENST00000396548 HAUS3Q68CZ6 603 aa14.26□□□□□ -0.13
TRIM39-204ENST00000396548 MORC4Q8TE76 937 aa14.26□□□□□ -0.13
TRIM39-204ENST00000396548 TEKT3Q9BXF9 490 aa14.26□□□□□ -0.13
TRIM39-204ENST00000396548 TUFT1Q9NNX1 390 aa14.26□□□□□ -0.13
TRIM39-204ENST00000396548 KIAA1024Q9UPX6 916 aa14.26□□□□□ -0.13
TRIM39-204ENST00000396548 MYMKA6NI61 221 aa14.25□□□□□ -0.13
TRIM39-204ENST00000396548 SPATA31C2B4DYI2 1134 aa14.25□□□□□ -0.13
TRIM39-204ENST00000396548 PPP1R3GB7ZBB8 358 aa14.25□□□□□ -0.13
TRIM39-204ENST00000396548 GAS7O60861 476 aa14.25□□□□□ -0.13
TRIM39-204ENST00000396548 CD44P16070 742 aaKnown RBP14.25□□□□□ -0.13
TRIM39-204ENST00000396548 KCNA2P16389 499 aa14.25□□□□□ -0.13
TRIM39-204ENST00000396548 MUTP22033 750 aa14.25□□□□□ -0.13
TRIM39-204ENST00000396548 ICAM3P32942 547 aa14.25□□□□□ -0.13
TRIM39-204ENST00000396548 SLC12A3P55017 1021 aa14.25□□□□□ -0.13
TRIM39-204ENST00000396548 PSMC6P62333 389 aa14.25□□□□□ -0.13
TRIM39-204ENST00000396548 RGMBQ6NW40 437 aa14.25□□□□□ -0.13
TRIM39-204ENST00000396548 MLKLQ8NB16 471 aa14.25□□□□□ -0.13
TRIM39-204ENST00000396548 PDLIM2Q96JY6 352 aa14.25□□□□□ -0.13
TRIM39-204ENST00000396548 SENP7Q9BQF6 1050 aa14.25□□□□□ -0.13
TRIM39-204ENST00000396548 ZCCHC17Q9NP64 241 aaKnown RBP14.25□□□□□ -0.13
TRIM39-204ENST00000396548 WRAP73Q9P2S5 460 aaPredicted RBP14.25□□□□□ -0.13
TRIM39-204ENST00000396548 RHOBTB3O94955 611 aa14.25□□□□□ -0.13
TRIM39-204ENST00000396548 GCLCP48506 637 aaPredicted RBP14.25□□□□□ -0.13
TRIM39-204ENST00000396548 EHHADHQ08426 723 aa14.25□□□□□ -0.13
TRIM39-204ENST00000396548 ZRSR1Q15695 479 aaKnown RBP14.25□□□□□ -0.13
TRIM39-204ENST00000396548 CT47A1Q5JQC4 288 aaPredicted RBP14.25□□□□□ -0.13
TRIM39-204ENST00000396548 SV2BQ7L1I2 683 aa14.25□□□□□ -0.13
TRIM39-204ENST00000396548 GPRC5AQ8NFJ5 357 aa14.25□□□□□ -0.13
TRIM39-204ENST00000396548 POTEFA5A3E0 1075 aa14.24□□□□□ -0.13
TRIM39-204ENST00000396548 E9PMD0 336 aa14.24□□□□□ -0.13
TRIM39-204ENST00000396548 IGF2BP3O00425 579 aaKnown RBP eCLIP14.24□□□□□ -0.13
TRIM39-204ENST00000396548 ZNF157P51786 506 aaPredicted RBP14.24□□□□□ -0.13
TRIM39-204ENST00000396548 EPHA7Q15375 998 aa14.24□□□□□ -0.13
TRIM39-204ENST00000396548 POTEGQ6S5H5 508 aa14.24□□□□□ -0.13
TRIM39-204ENST00000396548 RASSF8Q8NHQ8 419 aa14.24□□□□□ -0.13
TRIM39-204ENST00000396548 ERMNQ8TAM6 284 aa14.24□□□□□ -0.13
TRIM39-204ENST00000396548 DNAJC19Q96DA6 116 aa14.24□□□□□ -0.13
TRIM39-204ENST00000396548 GPBP1L1Q9HC44 474 aaPredicted RBP14.24□□□□□ -0.13
TRIM39-204ENST00000396548 TBC1D22BQ9NU19 505 aa14.24□□□□□ -0.13
TRIM39-204ENST00000396548 IKBKBO14920 756 aa14.24□□□□□ -0.13
TRIM39-204ENST00000396548 KMT5BQ4FZB7 885 aa14.24□□□□□ -0.13
TRIM39-204ENST00000396548 PPP1R9BQ96SB3 815 aa14.24□□□□□ -0.13
TRIM39-204ENST00000396548 NAT10Q9H0A0 1025 aaKnown RBP14.24□□□□□ -0.13
TRIM39-204ENST00000396548 RGL1Q9NZL6 768 aa14.24□□□□□ -0.13
TRIM39-204ENST00000396548 ARSHQ5FYA8 562 aa14.24□□□□□ -0.13
TRIM39-204ENST00000396548 ZNF658Q5TYW1 1059 aaPredicted RBP14.24□□□□□ -0.13
TRIM39-204ENST00000396548 CDK5RAP3Q96JB5 506 aa14.24□□□□□ -0.13
TRIM39-204ENST00000396548 HHIPL1Q96JK4 782 aa14.24□□□□□ -0.13
TRIM39-204ENST00000396548 NFASCO94856 1347 aa14.24□□□□□ -0.13
TRIM39-204ENST00000396548 EIF3JO75822 258 aaKnown RBP14.23□□□□□ -0.13
TRIM39-204ENST00000396548 CCNE2O96020 404 aa14.23□□□□□ -0.13
TRIM39-204ENST00000396548 ANKRD13CQ8N6S4 541 aa14.23□□□□□ -0.13
TRIM39-204ENST00000396548 SMC1BQ8NDV3 1235 aa14.23□□□□□ -0.13
TRIM39-204ENST00000396548 DYDC2Q96IM9 177 aa14.23□□□□□ -0.13
TRIM39-204ENST00000396548 MMP19Q99542 508 aa14.23□□□□□ -0.13
TRIM39-204ENST00000396548 EFCC1Q9HA90 598 aa14.23□□□□□ -0.13
TRIM39-204ENST00000396548 MANSC4A6NHS7 340 aaPredicted RBP14.23□□□□□ -0.13
TRIM39-204ENST00000396548 POTEB2H3BUK9 544 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms